MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 65253 bp
Accession: NZ_CP077421 Location: 3123818..3189070 Organism: Pectobacterium polaris strain QK413-1 Replicon: chromosome
Accession: NZ_CP077421 Location: 3123818..3189070 Organism: Pectobacterium polaris strain QK413-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KSL88_RS13925 (KSL88_13885) | 3118972..3122103 | + | 3132 | WP_224072136.1 | beta-galactosidase | - |
| KSL88_RS13930 (KSL88_13890) | 3122361..3123623 | + | 1263 | WP_224072137.1 | MFS transporter | - |
| KSL88_RS13940 (KSL88_13900) | 3124003..3125274 | + | 1272 | WP_224072138.1 | Prophage integrase IntA ; Integrase | Integrase |
| KSL88_RS13945 (KSL88_13905) | 3125409..3125723 | - | 315 | WP_025918867.1 | helix-turn-helix transcriptional regulator | - |
| KSL88_RS13950 (KSL88_13910) | 3125908..3126222 | - | 315 | WP_075278056.1 | helix-turn-helix transcriptional regulator | - |
| KSL88_RS13955 (KSL88_13915) | 3126369..3126641 | + | 273 | WP_014699383.1 | helix-turn-helix transcriptional regulator | - |
| KSL88_RS13960 (KSL88_13920) | 3127056..3127970 | + | 915 | WP_224072139.1 | hypothetical protein | - |
| KSL88_RS13965 (KSL88_13925) | 3128124..3128318 | + | 195 | WP_224072140.1 | AlpA family transcriptional regulator | - |
| KSL88_RS13970 (KSL88_13930) | 3128335..3128919 | + | 585 | WP_224072141.1 | DUF2857 domain-containing protein | - |
| KSL88_RS13975 (KSL88_13935) | 3128909..3129118 | + | 210 | WP_224072142.1 | TraR/DksA family transcriptional regulator | - |
| KSL88_RS13980 (KSL88_13940) | 3129544..3130458 | - | 915 | WP_224072143.1 | hypothetical protein | - |
| KSL88_RS13985 (KSL88_13945) | 3131003..3131224 | + | 222 | WP_107759823.1 | hypothetical protein | - |
| KSL88_RS13990 (KSL88_13950) | 3131304..3131969 | + | 666 | WP_224072144.1 | Type IV secretion system protein virB1 | VF |
| KSL88_RS13995 (KSL88_13955) | 3131966..3132247 | + | 282 | WP_109226163.1 | TrbC/VirB2 family protein | - |
| KSL88_RS14000 (KSL88_13960) | 3132257..3135004 | + | 2748 | WP_224072145.1 | Type IV secretion system protein virB4 | VF |
| KSL88_RS14005 (KSL88_13965) | 3135028..3135744 | + | 717 | WP_224072146.1 | type IV secretion system protein | - |
| KSL88_RS14010 (KSL88_13970) | 3135755..3135979 | + | 225 | WP_211045820.1 | EexN family lipoprotein | - |
| KSL88_RS14015 (KSL88_13975) | 3135991..3137031 | + | 1041 | WP_224072147.1 | type IV secretion system protein | - |
| KSL88_RS14020 (KSL88_13980) | 3137119..3137259 | + | 141 | WP_040031394.1 | hypothetical protein | - |
| KSL88_RS14025 (KSL88_13985) | 3137252..3137935 | + | 684 | WP_224072148.1 | Type IV secretion system protein PtlE | VF |
| KSL88_RS14030 (KSL88_13990) | 3137932..3138825 | + | 894 | WP_224072149.1 | P-type conjugative transfer protein VirB9 | - |
| KSL88_RS14035 (KSL88_13995) | 3138822..3140054 | + | 1233 | WP_224072150.1 | Type IV secretion system protein virB10 | VF |
| KSL88_RS14040 (KSL88_14000) | 3140044..3141060 | + | 1017 | WP_224072151.1 | Type IV secretion system protein VirB11 | VF |
| KSL88_RS14045 (KSL88_14005) | 3141104..3141406 | + | 303 | WP_111778814.1 | conjugal transfer protein | - |
| KSL88_RS14050 (KSL88_14010) | 3142132..3143994 | + | 1863 | WP_111778816.1 | type IV secretion system DNA-binding domain-containing protein | - |
| KSL88_RS14055 (KSL88_14015) | 3144003..3144749 | + | 747 | WP_111778817.1 | MobC family replication-relaxation protein | - |
| KSL88_RS14060 (KSL88_14020) | 3144876..3145241 | - | 366 | WP_222850891.1 | hypothetical protein | - |
| KSL88_RS14065 (KSL88_14025) | 3145238..3145483 | - | 246 | WP_111778818.1 | hypothetical protein | - |
| KSL88_RS14070 (KSL88_14030) | 3145476..3145703 | - | 228 | WP_222850890.1 | hypothetical protein | - |
| KSL88_RS14075 (KSL88_14035) | 3145715..3146443 | - | 729 | WP_181892574.1 | ATP-binding protein | - |
| KSL88_RS14080 | 3146688..3146852 | + | 165 | WP_224072152.1 | hypothetical protein | - |
| KSL88_RS14085 (KSL88_14045) | 3146985..3147299 | - | 315 | WP_111778821.1 | CcdB family protein | Toxin Detail |
| KSL88_RS14090 (KSL88_14050) | 3147302..3147538 | - | 237 | WP_010287128.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| KSL88_RS14095 (KSL88_14055) | 3147858..3148802 | - | 945 | WP_224072153.1 | zincin-like metallopeptidase domain-containing protein | - |
| KSL88_RS14100 (KSL88_14060) | 3149392..3149682 | + | 291 | WP_224072154.1 | hypothetical protein | - |
| KSL88_RS14105 (KSL88_14065) | 3149761..3151197 | + | 1437 | WP_224072155.1 | 3'-5' exonuclease | - |
| KSL88_RS14110 (KSL88_14070) | 3151194..3151844 | + | 651 | WP_224072156.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| KSL88_RS14115 (KSL88_14075) | 3151834..3153483 | + | 1650 | WP_224072157.1 | ADP-ribosylglycohydrolase family protein | - |
| KSL88_RS14120 (KSL88_14080) | 3153801..3154823 | - | 1023 | WP_224072158.1 | DUF4868 domain-containing protein | - |
| KSL88_RS14125 (KSL88_14085) | 3154826..3155440 | - | 615 | WP_224072159.1 | hypothetical protein | - |
| KSL88_RS14130 (KSL88_14090) | 3156237..3157514 | + | 1278 | WP_224073863.1 | Prophage integrase IntA ; Integrase | Integrase |
| KSL88_RS14135 (KSL88_14095) | 3157902..3158675 | + | 774 | WP_224072160.1 | hypothetical protein | - |
| KSL88_RS14140 (KSL88_14100) | 3158755..3159720 | - | 966 | WP_224072161.1 | site-specific DNA-methyltransferase | - |
| KSL88_RS14145 (KSL88_14105) | 3159789..3160478 | + | 690 | WP_224072162.1 | hypothetical protein | - |
| KSL88_RS14150 (KSL88_14110) | 3161340..3161510 | + | 171 | WP_224072163.1 | hypothetical protein | - |
| KSL88_RS14155 (KSL88_14115) | 3161587..3162942 | - | 1356 | WP_224072164.1 | hypothetical protein | - |
| KSL88_RS14160 (KSL88_14120) | 3162954..3163472 | - | 519 | WP_224072165.1 | hypothetical protein | - |
| KSL88_RS14165 (KSL88_14125) | 3163626..3163814 | - | 189 | Protein_2772 | bacteriocin immunity protein | - |
| KSL88_RS14170 (KSL88_14130) | 3164009..3164393 | - | 385 | Protein_2773 | type VI secretion system PAAR protein | - |
| KSL88_RS14175 (KSL88_14135) | 3164543..3166063 | - | 1521 | WP_224072166.1 | hypothetical protein | VF |
| KSL88_RS14180 (KSL88_14140) | 3166209..3166364 | + | 156 | WP_224072167.1 | hypothetical protein | - |
| KSL88_RS14190 (KSL88_14150) | 3166775..3167317 | - | 543 | WP_224072168.1 | Major structural subunit of bundle-forming pilus | VF |
| KSL88_RS14195 (KSL88_14155) | 3167396..3167632 | - | 237 | WP_224072169.1 | hypothetical protein | - |
| KSL88_RS14200 (KSL88_14160) | 3167734..3168135 | + | 402 | WP_103157148.1 | H-NS family nucleoid-associated regulatory protein | - |
| KSL88_RS14205 (KSL88_14165) | 3168195..3168674 | - | 480 | WP_205591087.1 | DUF2501 domain-containing protein | - |
| KSL88_RS14210 (KSL88_14170) | 3168870..3169154 | - | 285 | WP_224072170.1 | conjugal transfer protein TraD | - |
| KSL88_RS14215 (KSL88_14175) | 3169151..3169405 | - | 255 | WP_224072171.1 | hypothetical protein | - |
| KSL88_RS14220 (KSL88_14180) | 3169764..3170255 | - | 492 | WP_224072172.1 | NUDIX domain-containing protein | - |
| KSL88_RS14225 (KSL88_14185) | 3170966..3172366 | + | 1401 | WP_188247285.1 | MobQ family relaxase | - |
| KSL88_RS14230 (KSL88_14190) | 3172480..3173661 | - | 1182 | WP_224072173.1 | putative phage abortive infection protein | - |
| KSL88_RS14235 (KSL88_14195) | 3174028..3174582 | - | 555 | WP_224072174.1 | membrane lipoprotein lipid attachment site-containing protein | - |
| KSL88_RS14240 (KSL88_14200) | 3175216..3175593 | + | 378 | WP_039544300.1 | hypothetical protein | - |
| KSL88_RS14245 (KSL88_14205) | 3175684..3177036 | - | 1353 | WP_224072175.1 | DUF4062 domain-containing protein | - |
| KSL88_RS14250 (KSL88_14210) | 3177277..3177960 | - | 684 | WP_224072176.1 | hypothetical protein | - |
| KSL88_RS14255 (KSL88_14215) | 3178263..3178805 | + | 543 | WP_224072177.1 | hypothetical protein | - |
| KSL88_RS14260 | 3178812..3179219 | - | 408 | WP_224072178.1 | hypothetical protein | - |
| KSL88_RS14265 | 3179189..3179578 | - | 390 | WP_224072179.1 | hypothetical protein | - |
| KSL88_RS14270 (KSL88_14225) | 3181194..3181928 | + | 735 | WP_224072180.1 | replication/maintenance protein RepL | - |
| KSL88_RS14275 (KSL88_14230) | 3181953..3182480 | + | 528 | WP_224072181.1 | hypothetical protein | - |
| KSL88_RS14280 (KSL88_14235) | 3182899..3183378 | + | 480 | WP_224072182.1 | DUF4756 family protein | - |
| KSL88_RS14285 (KSL88_14240) | 3183577..3184296 | - | 720 | WP_224072183.1 | hypothetical protein | - |
| KSL88_RS14290 (KSL88_14245) | 3184477..3184737 | - | 261 | WP_224073866.1 | DNA-binding protein | - |
| KSL88_RS14295 (KSL88_14250) | 3184806..3185156 | - | 351 | WP_224072184.1 | hypothetical protein | - |
| KSL88_RS14300 (KSL88_14255) | 3185183..3185419 | - | 237 | WP_224072185.1 | hypothetical protein | - |
| KSL88_RS14305 (KSL88_14260) | 3185469..3185765 | - | 297 | WP_224072186.1 | hypothetical protein | - |
| KSL88_RS14310 (KSL88_14265) | 3185846..3186160 | - | 315 | WP_224072187.1 | hypothetical protein | - |
| KSL88_RS14315 (KSL88_14270) | 3186193..3186411 | - | 219 | WP_043878032.1 | AlpA family transcriptional regulator | - |
| KSL88_RS14320 (KSL88_14275) | 3186561..3187436 | - | 876 | WP_224072188.1 | DUF6387 family protein | - |
| KSL88_RS14325 (KSL88_14280) | 3187689..3188399 | - | 711 | WP_102117782.1 | hypothetical protein | - |
| KSL88_RS14330 (KSL88_14285) | 3189241..3190506 | + | 1266 | WP_224072189.1 | integrase arm-type DNA-binding domain-containing protein | - |
| KSL88_RS14335 (KSL88_14290) | 3190832..3191053 | + | 222 | WP_119889611.1 | Flp family type IVb pilin | - |
| KSL88_RS14340 (KSL88_14295) | 3191203..3191628 | - | 426 | WP_147387618.1 | hypothetical protein | - |
| KSL88_RS14345 (KSL88_14300) | 3191618..3192058 | - | 441 | WP_119889613.1 | hypothetical protein | - |
| KSL88_RS14350 | 3192474..3192654 | + | 181 | Protein_2808 | hypothetical protein | - |
| KSL88_RS14355 (KSL88_14305) | 3192802..3193011 | - | 210 | WP_224072190.1 | DUF4926 domain-containing protein | - |
| KSL88_RS14360 (KSL88_14310) | 3193029..3193247 | - | 219 | WP_071882765.1 | CPCC family cysteine-rich protein | - |
| KSL88_RS14365 (KSL88_14315) | 3193282..3193749 | - | 468 | WP_224072191.1 | DUF6392 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|