MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39340 bp
Accession: NZ_CP077334 Location: 1..39340 Organism: Lelliottia amnigena strain FDAARGOS 1446 Replicon: plasmid unnamed3
Accession: NZ_CP077334 Location: 1..39340 Organism: Lelliottia amnigena strain FDAARGOS 1446 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L76_RS23655 (I6L76_23655) | 1082..2032 | + | 951 | WP_040118355.1 | zincin-like metallopeptidase domain-containing protein | - |
| I6L76_RS23660 (I6L76_23660) | 2620..3375 | + | 756 | WP_223240927.1 | hypothetical protein | - |
| I6L76_RS23665 (I6L76_23665) | 3420..3941 | - | 522 | WP_040118353.1 | phospholipase D family protein | - |
| I6L76_RS23670 (I6L76_23670) | 3934..4680 | - | 747 | WP_040118352.1 | hypothetical protein | Relaxase |
| I6L76_RS23675 (I6L76_23675) | 4690..6525 | - | 1836 | WP_095661765.1 | TraM recognition domain-containing protein | - |
| I6L76_RS23680 (I6L76_23680) | 7227..7508 | - | 282 | WP_216982016.1 | hypothetical protein | - |
| I6L76_RS23685 (I6L76_23685) | 7477..7920 | - | 444 | WP_032490886.1 | H-NS family nucleoid-associated regulatory protein | - |
| I6L76_RS23690 (I6L76_23690) | 7982..10204 | - | 2223 | WP_201900562.1 | type IA DNA topoisomerase | - |
| I6L76_RS23695 (I6L76_23695) | 10207..10512 | - | 306 | WP_057632606.1 | conjugal transfer protein | - |
| I6L76_RS23700 (I6L76_23700) | 10616..11020 | - | 405 | WP_057632604.1 | cag pathogenicity island Cag12 family protein | - |
| I6L76_RS23705 (I6L76_23705) | 11007..12035 | - | 1029 | WP_201900560.1 | Type IV secretion system protein VirB11 | VF |
| I6L76_RS23710 (I6L76_23710) | 12046..13326 | - | 1281 | WP_032490882.1 | Type IV secretion system protein virB10 | VF |
| I6L76_RS23715 (I6L76_23715) | 13323..14219 | - | 897 | WP_216982017.1 | Type IV secretion system protein virB9 | VF |
| I6L76_RS23720 (I6L76_23720) | 14219..14902 | - | 684 | WP_032490880.1 | Type IV secretion system protein PtlE | VF |
| I6L76_RS23725 (I6L76_23725) | 14895..15032 | - | 138 | WP_032490879.1 | hypothetical protein | - |
| I6L76_RS23730 (I6L76_23730) | 15102..16103 | - | 1002 | WP_032490878.1 | type IV secretion system protein | - |
| I6L76_RS23735 (I6L76_23735) | 16096..16389 | - | 294 | WP_032490877.1 | EexN family lipoprotein | - |
| I6L76_RS23740 (I6L76_23740) | 16404..17126 | - | 723 | WP_050296633.1 | type IV secretion system protein | - |
| I6L76_RS23745 (I6L76_23745) | 17138..19885 | - | 2748 | WP_032490875.1 | Type IV secretion system protein virB4 | VF |
| I6L76_RS23750 (I6L76_23750) | 19895..20188 | - | 294 | WP_032490874.1 | Type IV secretion system protein virB2 | VF |
| I6L76_RS23755 (I6L76_23755) | 20198..20866 | - | 669 | WP_032490873.1 | Type IV secretion system protein virB1 | VF |
| I6L76_RS23760 (I6L76_23760) | 20887..21111 | - | 225 | WP_008815931.1 | hypothetical protein | - |
| I6L76_RS23765 (I6L76_23765) | 21190..21645 | - | 456 | WP_016361119.1 | transcription termination/antitermination NusG family protein | - |
| I6L76_RS23770 (I6L76_23770) | 21904..22266 | + | 363 | WP_008815933.1 | helix-turn-helix transcriptional regulator | - |
| I6L76_RS23775 (I6L76_23775) | 22926..23690 | + | 765 | WP_000076190.1 | plasmid replication initiator RepA | - |
| I6L76_RS23780 (I6L76_23780) | 24263..24505 | + | 243 | WP_000124732.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| I6L76_RS23785 (I6L76_23785) | 24498..24782 | + | 285 | WP_000277490.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6L76_RS23790 (I6L76_23790) | 25193..25561 | - | 369 | WP_032242306.1 | hypothetical protein | - |
| I6L76_RS23800 (I6L76_23800) | 26979..27569 | + | 591 | WP_014106760.1 | hypothetical protein | VF |
| I6L76_RS23805 (I6L76_23805) | 27665..28366 | + | 702 | WP_000820818.1 | putative fimbrial chaperone YadV | VF |
| I6L76_RS23810 (I6L76_23810) | 28378..30864 | + | 2487 | WP_054622923.1 | Outer membrane usher protein HtrE | VF |
| I6L76_RS23815 (I6L76_23815) | 30855..31850 | + | 996 | WP_085455086.1 | Fimbria adhesin protein | VF |
| I6L76_RS23820 (I6L76_23820) | 31864..32499 | + | 636 | WP_000677445.1 | hypothetical protein | VF |
| I6L76_RS24140 | 32534..32605 | - | 72 | Protein_35 | hypothetical protein | - |
| I6L76_RS23825 (I6L76_23825) | 32663..33360 | + | 698 | WP_223844742.1 | IS1 family transposase IS1R | Transposase |
| I6L76_RS23830 (I6L76_23830) | 33376..33603 | - | 228 | WP_044715105.1 | plasmid partition protein ParG | - |
| I6L76_RS23835 (I6L76_23835) | 33642..34262 | - | 621 | WP_044715110.1 | ParA family partition ATPase | - |
| I6L76_RS23840 (I6L76_23840) | 34417..35406 | - | 990 | WP_044715113.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| I6L76_RS23845 (I6L76_23845) | 36058..36291 | + | 234 | WP_216982015.1 | hypothetical protein | - |
| I6L76_RS23850 (I6L76_23850) | 36388..36873 | + | 486 | WP_051918079.1 | type III toxin-antitoxin system ToxN/AbiQ family toxin | - |
| I6L76_RS23855 (I6L76_23855) | 36949..37288 | + | 340 | Protein_42 | zincin-like metallopeptidase domain-containing protein | - |
| I6L76_RS23860 (I6L76_23860) | 37600..39129 | + | 1530 | WP_050880444.1 | SIR2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|