MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 58157 bp
Accession: NZ_CP077102 Location: 1..58157 Organism: Lactiplantibacillus pentosus strain 9D3 Replicon: plasmid pLPE-58K
Accession: NZ_CP077102 Location: 1..58157 Organism: Lactiplantibacillus pentosus strain 9D3 Replicon: plasmid pLPE-58K
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KSF55_RS16550 (KSF55_16520) | 1..1524 | + | 1524 | WP_252270482.1 | primase C-terminal domain-containing protein | - |
| KSF55_RS16555 (KSF55_16525) | 1806..2725 | + | 920 | Protein_1 | IS30 family transposase ISLsa1 | Transposase |
| KSF55_RS16560 (KSF55_16530) | 2741..3499 | + | 759 | Protein_2 | plasmid replication initiation protein | - |
| KSF55_RS16565 (KSF55_16535) | 3759..4040 | + | 282 | WP_014564139.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| KSF55_RS16570 (KSF55_16540) | 4030..4536 | + | 507 | WP_024748204.1 | hypothetical protein | - |
| KSF55_RS16575 (KSF55_16545) | 4526..4804 | - | 279 | WP_252270484.1 | hypothetical protein | - |
| KSF55_RS16580 (KSF55_16550) | 4826..5035 | - | 210 | WP_125982395.1 | hypothetical protein | - |
| KSF55_RS16585 (KSF55_16555) | 5282..5479 | - | 198 | Protein_7 | site-specific integrase | - |
| KSF55_RS16590 (KSF55_16560) | 5909..6689 | + | 781 | Protein_8 | IS5 family transposase | - |
| KSF55_RS16595 (KSF55_16565) | 7335..10139 | + | 2805 | WP_252270486.1 | cation-transporting P-type ATPase | - |
| KSF55_RS16600 (KSF55_16570) | 10199..10471 | + | 273 | WP_012491083.1 | hypothetical protein | - |
| KSF55_RS16605 (KSF55_16575) | 10507..10974 | + | 468 | WP_226769518.1 | replication initiation protein RepA | - |
| KSF55_RS16610 | 11199..11777 | - | 579 | WP_056953173.1 | hypothetical protein | Relaxase |
| KSF55_RS16615 | 11827..12504 | - | 678 | Protein_13 | hypothetical protein | Relaxase |
| KSF55_RS16620 | 12486..12839 | - | 354 | WP_021730116.1 | hypothetical protein | Relaxase |
| KSF55_RS16625 (KSF55_16590) | 13307..13576 | - | 270 | WP_001748276.1 | helix-turn-helix transcriptional regulator | - |
| KSF55_RS16630 (KSF55_16595) | 13563..13934 | - | 372 | WP_001748275.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KSF55_RS16635 (KSF55_16600) | 13986..14573 | - | 588 | WP_252270488.1 | site-specific integrase | - |
| KSF55_RS16640 (KSF55_16605) | 14659..14922 | + | 264 | WP_001748109.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| KSF55_RS16645 (KSF55_16610) | 14916..15260 | + | 345 | WP_001748110.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| KSF55_RS16650 (KSF55_16615) | 15803..16270 | + | 468 | WP_003587210.1 | DNA starvation/stationary phase protection protein | - |
| KSF55_RS16655 (KSF55_16620) | 16517..17260 | + | 744 | WP_003581836.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| KSF55_RS16660 (KSF55_16625) | 17238..18485 | + | 1248 | WP_027822874.1 | ABC transporter permease | - |
| KSF55_RS16665 (KSF55_16630) | 18490..19161 | + | 672 | WP_025025373.1 | TetR/AcrR family transcriptional regulator | - |
| KSF55_RS16670 (KSF55_16635) | 19265..19414 | - | 150 | WP_225364958.1 | hypothetical protein | - |
| KSF55_RS16675 (KSF55_16640) | 19431..20101 | - | 671 | Protein_25 | IS5 family transposase | - |
| KSF55_RS16680 (KSF55_16645) | 20117..20611 | + | 495 | WP_286675923.1 | transposase | - |
| KSF55_RS16685 (KSF55_16650) | 20733..22052 | - | 1320 | WP_252270490.1 | Sir2 silent information regulator family NAD-dependent deacetylase | - |
| KSF55_RS16690 (KSF55_16655) | 22045..22905 | - | 861 | WP_252270492.1 | Sir2 silent information regulator family NAD-dependent deacetylase | - |
| KSF55_RS16695 (KSF55_16660) | 23099..23674 | + | 576 | WP_226769593.1 | TetR/AcrR family transcriptional regulator | - |
| KSF55_RS16700 (KSF55_16665) | 24658..25194 | + | 537 | WP_226769443.1 | IS3 family transposase ISLsa2 | Transposase |
| KSF55_RS16705 (KSF55_16670) | 25191..26078 | + | 888 | WP_252270494.1 | IS3 family transposase ISLsa2 | Transposase |
| KSF55_RS16710 (KSF55_16675) | 26133..27539 | - | 1407 | WP_226769444.1 | MFS transporter | - |
| KSF55_RS16715 (KSF55_16680) | 27722..29065 | + | 1344 | WP_252270496.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| KSF55_RS16720 (KSF55_16685) | 29296..30075 | + | 780 | WP_226769446.1 | MBL fold metallo-hydrolase | - |
| KSF55_RS16725 | 30325..30772 | - | 448 | Protein_35 | ECF transporter S component | - |
| KSF55_RS16730 (KSF55_16695) | 31167..31721 | + | 555 | WP_226769447.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| KSF55_RS16735 (KSF55_16700) | 31973..33352 | - | 1380 | WP_226769448.1 | group II intron reverse transcriptase/maturase | - |
| KSF55_RS16740 (KSF55_16705) | 33937..34470 | + | 534 | WP_225432604.1 | IS3 family transposase ISSth1b | Transposase |
| KSF55_RS16745 (KSF55_16710) | 34598..35548 | - | 951 | WP_020923860.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| KSF55_RS16750 (KSF55_16715) | 35563..36489 | - | 927 | WP_010623241.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| KSF55_RS16755 (KSF55_16720) | 36596..38743 | - | 2148 | WP_057704821.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| KSF55_RS16760 (KSF55_16725) | 38771..39229 | - | 459 | WP_072533468.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| KSF55_RS16765 (KSF55_16730) | 39587..39871 | + | 285 | WP_152706156.1 | hypothetical protein | - |
| KSF55_RS17400 | 39985..40110 | + | 126 | WP_259690330.1 | hypothetical protein | - |
| KSF55_RS16770 (KSF55_16735) | 40360..40980 | + | 621 | WP_252270464.1 | hypothetical protein | - |
| KSF55_RS16775 (KSF55_16740) | 41291..41464 | - | 174 | WP_225368208.1 | hypothetical protein | - |
| KSF55_RS16780 (KSF55_16745) | 41529..41864 | - | 336 | WP_152706160.1 | DUF5388 domain-containing protein | - |
| KSF55_RS16785 (KSF55_16750) | 41857..42666 | - | 810 | WP_152706161.1 | AAA family ATPase | - |
| KSF55_RS16790 (KSF55_16755) | 43892..44679 | + | 788 | WP_252270466.1 | IS5 family transposase ISCARN82 | Transposase |
| KSF55_RS16795 (KSF55_16760) | 44639..45886 | - | 1248 | WP_252270468.1 | cytosine deaminase | - |
| KSF55_RS16800 (KSF55_16765) | 46084..47433 | + | 1350 | WP_252270470.1 | cytosine permease | - |
| KSF55_RS16805 (KSF55_16770) | 47745..48125 | + | 381 | WP_286675924.1 | ISL3 family transposase ISSau8 | Transposase |
| KSF55_RS16810 (KSF55_16775) | 48057..48254 | - | 198 | Protein_53 | integrase | - |
| KSF55_RS16815 (KSF55_16785) | 48655..49596 | - | 942 | WP_057887572.1 | nucleoside hydrolase | - |
| KSF55_RS16820 (KSF55_16790) | 49827..50849 | + | 1023 | WP_286675925.1 | BMP family protein | - |
| KSF55_RS16825 (KSF55_16795) | 51005..52528 | + | 1524 | WP_252270474.1 | Galactose/methyl galactoside import ATP-binding protein MglA | VF |
| KSF55_RS16830 (KSF55_16800) | 52543..53625 | + | 1083 | WP_252270477.1 | ABC transporter permease | - |
| KSF55_RS16835 (KSF55_16805) | 53622..54581 | + | 960 | WP_252270479.1 | ABC transporter permease | - |
| KSF55_RS16840 (KSF55_16810) | 54612..55301 | - | 690 | WP_252270480.1 | IS1182 family transposase ISSau3 | Transposase |
| KSF55_RS16845 (KSF55_16815) | 55382..55453 | - | 72 | Protein_60 | DUF536 domain-containing protein | - |
| KSF55_RS16850 (KSF55_16820) | 55446..56261 | - | 816 | Protein_61 | replication initiation protein | - |
| KSF55_RS16855 (KSF55_16825) | 56390..56671 | - | 282 | WP_042255044.1 | DNA segregation protein PrgO | - |
| KSF55_RS16860 (KSF55_16830) | 56658..57557 | - | 900 | WP_042255042.1 | ParA superfamily DNA segregation protein PrgP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|