MGE detailed information
MGE type: Genomic_island MGE length: 8740 bp
Accession: NZ_CP077081 Location: 537223..545962 Organism: Pseudomonas atacamensis strain SWRI76 Replicon: chromosome
Accession: NZ_CP077081 Location: 537223..545962 Organism: Pseudomonas atacamensis strain SWRI76 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KSS92_RS02315 (KSS92_02315) | 532780..533526 | + | 747 | WP_016772154.1 | 2OG-Fe dioxygenase family protein | - |
| KSS92_RS02320 (KSS92_02320) | 533606..533983 | + | 378 | WP_008080517.1 | GNAT family N-acetyltransferase | - |
| KSS92_RS02325 (KSS92_02325) | 533980..534696 | + | 717 | WP_016772152.1 | AzlC family ABC transporter permease | - |
| KSS92_RS02330 (KSS92_02330) | 534675..534992 | + | 318 | WP_041477503.1 | AzlD domain-containing protein | - |
| KSS92_RS02335 (KSS92_02335) | 534909..535835 | - | 927 | WP_016772151.1 | LysR family transcriptional regulator | - |
| KSS92_RS02340 (KSS92_02340) | 536148..536555 | + | 408 | WP_136492433.1 | MbcA/ParS/Xre antitoxin family protein | - |
| KSS92_RS02345 (KSS92_02345) | 536552..537232 | + | 681 | WP_136492432.1 | RES family NAD+ phosphorylase | - |
| KSS92_RS02350 (KSS92_02350) | 537223..538041 | - | 819 | WP_136492431.1 | lipopolysaccharide biosynthesis protein | - |
| KSS92_RS27360 | 538319..538396 | - | 78 | WP_231507592.1 | hypothetical protein | - |
| KSS92_RS27075 | 538416..538529 | + | 114 | Protein_464 | transcriptional regulator | - |
| KSS92_RS02365 (KSS92_02365) | 539106..540341 | - | 1236 | WP_217879155.1 | methyltransferase | - |
| KSS92_RS02370 (KSS92_02370) | 540322..541011 | - | 690 | WP_016772145.1 | ABC transporter permease | - |
| KSS92_RS02375 (KSS92_02375) | 541008..541703 | - | 696 | WP_217879156.1 | ABC transporter permease | - |
| KSS92_RS02380 (KSS92_02380) | 541781..542533 | - | 753 | WP_217879157.1 | ABC transporter substrate-binding protein | - |
| KSS92_RS02385 (KSS92_02385) | 542547..543320 | - | 774 | WP_024011209.1 | Octopine permease ATP-binding protein P | VF |
| KSS92_RS02390 (KSS92_02390) | 543864..545255 | + | 1392 | WP_016772141.1 | GABA permease | - |
| KSS92_RS02395 (KSS92_02395) | 545334..545732 | - | 399 | WP_016772140.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| KSS92_RS02400 (KSS92_02400) | 545732..545962 | - | 231 | WP_076565118.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| KSS92_RS02405 (KSS92_02405) | 546128..546580 | - | 453 | WP_016772138.1 | hypothetical protein | - |
| KSS92_RS02410 (KSS92_02410) | 546587..547000 | - | 414 | WP_016772137.1 | hypothetical protein | - |
| KSS92_RS02415 (KSS92_02415) | 547030..548004 | - | 975 | WP_217879158.1 | alpha/beta fold hydrolase | - |
| KSS92_RS02420 (KSS92_02420) | 548072..549130 | - | 1059 | WP_136492691.1 | PDDEXK nuclease domain-containing protein | - |
| KSS92_RS02425 (KSS92_02425) | 549412..549756 | - | 345 | WP_110602162.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|