MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 51361 bp
Accession: NZ_CP076823 Location: 1841590..1892950 Organism: Staphylococcus aureus strain ST59 Replicon: chromosome
Accession: NZ_CP076823 Location: 1841590..1892950 Organism: Staphylococcus aureus strain ST59 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQY23_RS13745 () | 1837679..1838574 | - | 896 | Protein_1717 | tyrosine-type recombinase/integrase | - |
| KQY23_RS08690 () | 1838748..1839995 | + | 1248 | Protein_1718 | polysaccharide lyase beta-sandwich domain-containing protein | - |
| KQY23_RS08695 () | 1840055..1840909 | - | 855 | WP_001044434.1 | M23 family metallopeptidase | - |
| KQY23_RS08700 () | 1841160..1841690 | - | 531 | WP_001838616.1 | restriction endonuclease subunit S | - |
| KQY23_RS08705 () | 1842122..1842301 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| KQY23_RS08710 () | 1842612..1842872 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| KQY23_RS08715 () | 1842925..1843275 | - | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| KQY23_RS08720 () | 1843960..1844409 | + | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| KQY23_RS08725 () | 1844504..1844839 | - | 336 | Protein_1725 | SH3 domain-containing protein | - |
| KQY23_RS08730 () | 1845489..1845980 | - | 492 | WP_000920037.1 | staphylokinase | - |
| KQY23_RS08735 () | 1846171..1846926 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| KQY23_RS08740 () | 1846938..1847192 | - | 255 | WP_000611512.1 | phage holin | - |
| KQY23_RS08745 () | 1847244..1847351 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 1847273..1847412 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1847273..1847412 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1847273..1847412 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1847273..1847412 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - | 1847281..1847336 | + | 56 | - | - | Antitoxin Detail |
| KQY23_RS08750 () | 1847404..1847580 | - | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| KQY23_RS08755 () | 1847730..1848026 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| KQY23_RS08760 () | 1848084..1848371 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| KQY23_RS08765 () | 1848418..1848570 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| KQY23_RS08770 () | 1848560..1852345 | - | 3786 | WP_044557000.1 | phage tail spike protein | - |
| KQY23_RS08775 () | 1852361..1853845 | - | 1485 | WP_044557002.1 | phage tail family protein | - |
| KQY23_RS08780 () | 1853842..1858386 | - | 4545 | Protein_1736 | phage tail tape measure protein | - |
| KQY23_RS08785 () | 1858443..1858580 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| KQY23_RS08790 () | 1858631..1858981 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| KQY23_RS08795 () | 1859031..1859243 | - | 213 | WP_078101489.1 | Ig-like domain-containing protein | - |
| KQY23_RS08800 () | 1859297..1859941 | - | 645 | WP_044557008.1 | phage tail protein | - |
| KQY23_RS08805 () | 1859942..1860349 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| KQY23_RS08810 () | 1860346..1860750 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| KQY23_RS08815 () | 1860747..1861109 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| KQY23_RS08820 () | 1861093..1861377 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| KQY23_RS08825 () | 1861367..1861651 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| KQY23_RS08830 () | 1861671..1862816 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| KQY23_RS08835 () | 1862840..1863577 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| KQY23_RS08840 () | 1863561..1864748 | - | 1188 | WP_113556760.1 | phage portal protein | - |
| KQY23_RS08845 () | 1864764..1866425 | - | 1662 | WP_031901050.1 | terminase large subunit | - |
| KQY23_RS08850 () | 1866422..1866766 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| KQY23_RS08855 () | 1866896..1867195 | - | 300 | WP_000988330.1 | HNH endonuclease | - |
| KQY23_RS08860 () | 1867427..1867843 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| KQY23_RS08865 () | 1867871..1868071 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| KQY23_RS08870 () | 1868071..1868220 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| KQY23_RS08875 () | 1868217..1868603 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| KQY23_RS08880 () | 1868600..1868806 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| KQY23_RS08885 () | 1868803..1869048 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| KQY23_RS08890 () | 1869085..1869621 | - | 537 | WP_000185680.1 | dUTPase | - |
| KQY23_RS08895 () | 1869614..1869862 | - | 249 | WP_001065072.1 | DUF1024 family protein | - |
| KQY23_RS08900 () | 1869876..1870118 | - | 243 | WP_000131384.1 | SAV1978 family virulence-associated passenger protein | - |
| KQY23_RS08905 () | 1870122..1870490 | - | 369 | WP_000101275.1 | SA1788 family PVL leukocidin-associated protein | - |
| KQY23_RS08910 () | 1870503..1870958 | - | 456 | WP_000401965.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KQY23_RS08915 () | 1870967..1871185 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| KQY23_RS08920 () | 1871192..1872085 | - | 894 | WP_031770227.1 | DnaD domain-containing protein | - |
| KQY23_RS08925 () | 1872115..1872585 | - | 471 | WP_000934772.1 | single-stranded DNA-binding protein | - |
| KQY23_RS08930 () | 1872586..1873203 | - | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| KQY23_RS08935 () | 1873284..1874204 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| KQY23_RS08940 () | 1874206..1876149 | - | 1944 | WP_113556759.1 | AAA family ATPase | - |
| KQY23_RS08945 () | 1876158..1876421 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| KQY23_RS08950 () | 1876430..1876690 | - | 261 | WP_072456798.1 | DUF1108 family protein | - |
| KQY23_RS08955 () | 1876695..1876997 | - | 303 | WP_044131919.1 | DUF2482 family protein | - |
| KQY23_RS08960 () | 1877089..1877250 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| KQY23_RS08965 () | 1877247..1877567 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| KQY23_RS08970 () | 1877626..1878258 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| KQY23_RS08975 () | 1878273..1878413 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| KQY23_RS08980 () | 1878444..1878641 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| KQY23_RS08985 () | 1878657..1879409 | - | 753 | WP_113556758.1 | phage antirepressor KilAC domain-containing protein | - |
| KQY23_RS08990 () | 1879460..1879789 | + | 330 | WP_000180411.1 | hypothetical protein | - |
| KQY23_RS08995 () | 1879778..1879993 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| KQY23_RS09000 () | 1880009..1880272 | - | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| KQY23_RS09005 () | 1880269..1880442 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| KQY23_RS09010 () | 1880405..1881118 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| KQY23_RS09015 () | 1881134..1882066 | + | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| KQY23_RS09020 () | 1882072..1882413 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| KQY23_RS09025 () | 1882617..1882799 | + | 183 | WP_000705248.1 | hypothetical protein | - |
| KQY23_RS09030 () | 1882899..1883363 | + | 465 | WP_000825947.1 | hypothetical protein | - |
| KQY23_RS09035 () | 1883422..1884459 | + | 1038 | WP_000857191.1 | site-specific integrase | - |
| KQY23_RS09040 () | 1884622..1885980 | - | 1359 | WP_031883303.1 | FtsK/SpoIIIE domain-containing protein | - |
| KQY23_RS09045 () | 1886034..1888529 | - | 2496 | WP_001049264.1 | ATP-binding protein | - |
| KQY23_RS09050 () | 1888564..1888947 | - | 384 | WP_000358144.1 | TcpE family conjugal transfer membrane protein | - |
| KQY23_RS09055 () | 1888959..1889219 | - | 261 | WP_000015644.1 | TcpD family membrane protein | - |
| KQY23_RS09060 () | 1889224..1890279 | - | 1056 | WP_000692005.1 | conjugal transfer protein | - |
| KQY23_RS09065 () | 1890340..1891431 | - | 1092 | WP_000172943.1 | replication initiation factor domain-containing protein | - |
| KQY23_RS09070 () | 1891606..1891908 | - | 303 | WP_000386891.1 | hypothetical protein | - |
| KQY23_RS09075 () | 1891922..1892242 | - | 321 | WP_000805732.1 | DUF961 family protein | - |
| KQY23_RS09080 () | 1892393..1892677 | - | 285 | WP_000134547.1 | hypothetical protein | - |
| KQY23_RS09085 () | 1892731..1892829 | - | 99 | Protein_1797 | transposase | - |
| KQY23_RS09090 () | 1892822..1894113 | - | 1292 | Protein_1798 | IS21 family transposase | - |
| KQY23_RS09095 () | 1894204..1894470 | + | 267 | Protein_1799 | hypothetical protein | - |
| KQY23_RS09100 () | 1894507..1895295 | + | 789 | WP_000206347.1 | DUF1829 domain-containing protein | - |
| KQY23_RS13750 () | 1895756..1895966 | + | 211 | Protein_1801 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|