MGE detailed information
MGE type: Prophage MGE length: 51418 bp
Accession: NZ_CP076706 Location: 3419889..3471306 Organism: Escherichia coli O170:H18 strain CFIAFB20120266 Replicon: chromosome
Accession: NZ_CP076706 Location: 3419889..3471306 Organism: Escherichia coli O170:H18 strain CFIAFB20120266 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQ217_RS16460 (3415470) | 3415470..3416147 | + | 678 | WP_001298690.1 | DNA-binding transcriptional activator BglJ | - |
| KQ217_RS16465 (3416185) | 3416185..3416973 | - | 789 | WP_000331596.1 | siderophore-iron reductase FhuF | - |
| KQ217_RS16470 (3417114) | 3417114..3417350 | + | 237 | WP_001350368.1 | DUF1435 domain-containing protein | - |
| KQ217_RS16490 (3417912) | 3417912..3418943 | - | 1032 | WP_001272332.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| KQ217_RS16495 (3419046) | 3419046..3419459 | + | 414 | WP_000204030.1 | DNA polymerase III subunit psi | - |
| KQ217_RS16500 (3419428) | 3419428..3419874 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| KQ217_RS16505 (3419889) | 3419889..3420566 | + | 678 | WP_000870712.1 | pyrimidine 5'-nucleotidase | - |
| KQ217_RS16510 (3420952) | 3420952..3422175 | + | 1224 | WP_216803484.1 | Prophage integrase IntA ; Integrase | Integrase |
| KQ217_RS16515 (3422547) | 3422547..3423773 | - | 1227 | WP_216803485.1 | dNTP triphosphohydrolase | - |
| KQ217_RS16520 (3424004) | 3424004..3424219 | - | 216 | WP_001061360.1 | helix-turn-helix domain-containing protein | - |
| KQ217_RS24705 (3424219) | 3424219..3424458 | - | 240 | Protein_3227 | DUF551 domain-containing protein | - |
| KQ217_RS16530 (3424839) | 3424839..3425201 | - | 363 | WP_001242716.1 | hypothetical protein | - |
| KQ217_RS16535 (3425192) | 3425192..3425728 | - | 537 | WP_000008178.1 | 5'-deoxynucleotidase | - |
| KQ217_RS16540 (3425856) | 3425856..3426680 | - | 825 | WP_000081287.1 | DUF2303 family protein | - |
| KQ217_RS16545 (3426746) | 3426746..3427108 | - | 363 | WP_216803487.1 | hypothetical protein | - |
| KQ217_RS16550 (3427811) | 3427811..3428503 | - | 693 | WP_001311077.1 | XRE family transcriptional regulator | - |
| KQ217_RS16555 (3428601) | 3428601..3428861 | + | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| KQ217_RS16560 (3428854) | 3428854..3429405 | + | 552 | WP_101973819.1 | protein YmfL | - |
| KQ217_RS24710 (3429551) | 3429551..3429724 | + | 174 | WP_071829521.1 | DUF4222 domain-containing protein | - |
| KQ217_RS24715 (3429746) | 3429746..3430054 | - | 309 | WP_101973818.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| KQ217_RS24720 (3430044) | 3430044..3430274 | - | 231 | WP_229377364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQ217_RS24725 (3430239) | 3430239..3431261 | + | 1023 | WP_229377367.1 | Rha family phage regulatory protein | - |
| KQ217_RS16570 (3431258) | 3431258..3431452 | + | 195 | WP_216803488.1 | hypothetical protein | - |
| KQ217_RS16575 (3431449) | 3431449..3431673 | + | 225 | WP_101973816.1 | hypothetical protein | - |
| KQ217_RS16580 (3431670) | 3431670..3432488 | + | 819 | WP_101973815.1 | helix-turn-helix domain-containing protein | - |
| KQ217_RS16585 (3432485) | 3432485..3432979 | + | 495 | WP_021576994.1 | PerC family transcriptional regulator | - |
| KQ217_RS16590 (3432979) | 3432979..3433305 | + | 327 | WP_000210178.1 | LexA repressor | - |
| KQ217_RS16595 (3433302) | 3433302..3433667 | + | 366 | WP_044717961.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KQ217_RS16600 (3433849) | 3433849..3434664 | + | 816 | WP_101973814.1 | KilA-N domain-containing protein | - |
| KQ217_RS16605 (3434672) | 3434672..3435661 | + | 990 | WP_101973813.1 | DUF968 domain-containing protein | - |
| KQ217_RS16610 (3435675) | 3435675..3436427 | + | 753 | WP_052907895.1 | antitermination protein | - |
| KQ217_RS16615 (3436698) | 3436698..3436868 | + | 171 | WP_225915849.1 | TrmB family transcriptional regulator | - |
| KQ217_RS16620 (3437017) | 3437017..3437904 | + | 888 | WP_267877501.1 | site-specific DNA-methyltransferase | - |
| KQ217_RS16625 (3437914) | 3437914..3438696 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| KQ217_RS16630 (3438693) | 3438693..3439715 | - | 1023 | WP_001455283.1 | IS21 family transposase IS100kyp | Transposase |
| KQ217_RS16635 (3439802) | 3439802..3440035 | + | 234 | Protein_3252 | site-specific DNA-methyltransferase | - |
| KQ217_RS16655 (3440418) | 3440418..3441377 | + | 960 | WP_101973812.1 | Shiga toxin subunit A | VF |
| KQ217_RS16660 (3441390) | 3441390..3441653 | + | 264 | WP_101973811.1 | Shiga toxin subunit B | VF |
| KQ217_RS16665 (3441991) | 3441991..3442308 | - | 318 | WP_101973673.1 | anti-adapter protein IraM | - |
| KQ217_RS16670 (3442643) | 3442643..3444637 | + | 1995 | WP_216803491.1 | DUF1737 domain-containing protein | - |
| KQ217_RS16675 (3444771) | 3444771..3444956 | + | 186 | WP_033553189.1 | DUF1378 family protein | - |
| KQ217_RS16680 (3444979) | 3444979..3445284 | + | 306 | WP_101973809.1 | DUF826 domain-containing protein | - |
| KQ217_RS16685 (3445362) | 3445362..3445577 | + | 216 | WP_087906417.1 | class II holin family protein | - |
| KQ217_RS24730 (3445582) | 3445582..3445917 | + | 336 | Protein_3260 | YdfR family protein | - |
| KQ217_RS24735 (3446116) | 3446116..3446642 | + | 527 | Protein_3261 | hypothetical protein | - |
| KQ217_RS16700 (3446708) | 3446708..3447241 | + | 534 | WP_101973808.1 | lysozyme | - |
| KQ217_RS16705 (3447397) | 3447397..3447579 | + | 183 | WP_001303555.1 | hypothetical protein | - |
| KQ217_RS16710 (3447592) | 3447592..3447723 | + | 132 | WP_001441792.1 | hypothetical protein | - |
| KQ217_RS16715 (3447951) | 3447951..3448136 | + | 186 | WP_158639733.1 | Rz1 family lipoprotein | - |
| KQ217_RS16725 (3449741) | 3449741..3450250 | + | 510 | WP_101973669.1 | terminase small subunit | - |
| KQ217_RS16730 (3450222) | 3450222..3452150 | + | 1929 | WP_101973668.1 | phage terminase large subunit family protein | - |
| KQ217_RS16735 (3452134) | 3452134..3452340 | + | 207 | WP_216803493.1 | gpW family head-tail joining protein | - |
| KQ217_RS16740 (3452337) | 3452337..3453929 | + | 1593 | WP_101973805.1 | phage portal protein | - |
| KQ217_RS16745 (3453919) | 3453919..3455424 | + | 1506 | WP_216803494.1 | S49 family peptidase | - |
| KQ217_RS16750 (3455461) | 3455461..3455808 | + | 348 | WP_059236877.1 | head decoration protein | - |
| KQ217_RS16755 (3455866) | 3455866..3456894 | + | 1029 | WP_216803495.1 | major capsid protein | - |
| KQ217_RS16760 (3456946) | 3456946..3457329 | + | 384 | WP_216803496.1 | DNA-packaging protein FI | - |
| KQ217_RS16765 (3457322) | 3457322..3457675 | + | 354 | WP_216803497.1 | head-tail joining protein | - |
| KQ217_RS16770 (3457690) | 3457690..3458223 | + | 534 | WP_216803498.1 | phage tail protein | - |
| KQ217_RS16775 (3458220) | 3458220..3458615 | + | 396 | WP_216803500.1 | phage minor tail U family protein | - |
| KQ217_RS16780 (3458623) | 3458623..3459372 | + | 750 | WP_216803502.1 | phage tail protein | - |
| KQ217_RS16785 (3459392) | 3459392..3459823 | + | 432 | WP_216803513.1 | phage minor tail protein G | - |
| KQ217_RS16790 (3459850) | 3459850..3460263 | + | 414 | WP_216803515.1 | phage tail assembly protein T | - |
| KQ217_RS16795 (3460244) | 3460244..3462823 | + | 2580 | WP_216803517.1 | phage tail tape measure protein | - |
| KQ217_RS16800 (3462820) | 3462820..3463149 | + | 330 | WP_216803518.1 | phage tail protein | - |
| KQ217_RS16805 (3463149) | 3463149..3463847 | + | 699 | WP_216803519.1 | phage minor tail protein L | - |
| KQ217_RS16810 (3463853) | 3463853..3464596 | + | 744 | WP_216803520.1 | C40 family peptidase | - |
| KQ217_RS16815 (3464593) | 3464593..3465171 | + | 579 | WP_229377370.1 | tail assembly protein | - |
| KQ217_RS24745 (3465417) | 3465417..3468811 | + | 3395 | Protein_3285 | host specificity protein J | - |
| KQ217_RS16825 (3468879) | 3468879..3469478 | + | 600 | WP_101973535.1 | Attachment invasion locus protein | VF |
| KQ217_RS16830 (3469542) | 3469542..3470690 | + | 1149 | WP_216803521.1 | ISNCY family transposase KIS | Transposase |
| KQ217_RS16835 (3470701) | 3470701..3471306 | + | 606 | WP_225915853.1 | DUF4376 domain-containing protein | - |
| KQ217_RS16840 (3471566) | 3471566..3471928 | + | 363 | WP_225915854.1 | zinc ribbon domain-containing protein | - |
| KQ217_RS16845 (3472290) | 3472290..3472505 | - | 216 | WP_101973791.1 | DinI-like family protein | - |
| KQ217_RS16850 (3472634) | 3472634..3474220 | + | 1587 | WP_000202563.1 | peptide chain release factor 3 | - |
| KQ217_RS16855 (3474613) | 3474613..3475218 | + | 606 | WP_001295748.1 | molecular chaperone OsmY | - |
| KQ217_RS16860 (3475345) | 3475345..3475506 | + | 162 | WP_000490275.1 | DUF1328 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|