MGE detailed information
MGE type: Conjugative plasmid MGE length: 116936 bp
Accession: NZ_CP076688 Location: 1..116936 Organism: Escherichia coli strain S22EC Replicon: plasmid pS22EC_A
Accession: NZ_CP076688 Location: 1..116936 Organism: Escherichia coli strain S22EC Replicon: plasmid pS22EC_A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQ258_RS24725 (1) | 1..858 | + | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| KQ258_RS24730 (1914) | 1914..2618 | + | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| KQ258_RS24735 (2705) | 2705..2875 | + | 171 | Protein_2 | DsbA family protein | - |
| KQ258_RS24740 (2865) | 2865..3371 | + | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| KQ258_RS24745 (3608) | 3608..4369 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| KQ258_RS24750 (4716) | 4716..6602 | + | 1887 | WP_001332815.1 | FTR1 family protein | - |
| KQ258_RS24755 (6643) | 6643..7170 | + | 528 | WP_000178050.1 | iron transporter | - |
| KQ258_RS24760 (7274) | 7274..8653 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| KQ258_RS24765 (8656) | 8656..9939 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| KQ258_RS24770 (9929) | 9929..11059 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| KQ258_RS24775 (11064) | 11064..11759 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| KQ258_RS24780 (11746) | 11746..12231 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| KQ258_RS24785 (12256) | 12256..12741 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| KQ258_RS24790 (12863) | 12863..13496 | + | 634 | Protein_13 | histidine-type phosphatase | - |
| KQ258_RS24795 (13646) | 13646..13819 | - | 174 | Protein_14 | IS5 family transposase ISKpn26 | Transposase |
| KQ258_RS24800 (13820) | 13820..14134 | - | 315 | Protein_15 | IS5 family transposase ISKpn26 | Transposase |
| KQ258_RS24805 (14807) | 14807..15546 | - | 740 | Protein_16 | IS3 family transposase IS629 | Transposase |
| KQ258_RS24810 (15648) | 15648..15908 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| KQ258_RS24815 (15905) | 15905..16414 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| KQ258_RS24820 (16434) | 16434..16781 | - | 348 | WP_000142452.1 | DUF6404 family protein | - |
| KQ258_RS24825 (16910) | 16910..17245 | + | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| KQ258_RS24830 (18697) | 18697..19383 | + | 687 | Protein_21 | replication initiation protein | - |
| KQ258_RS24835 (19715) | 19715..20590 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| KQ258_RS24840 (20598) | 20598..21374 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| KQ258_RS24845 (21543) | 21543..23804 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| KQ258_RS24850 (23873) | 23873..25048 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| KQ258_RS24855 (25571) | 25571..25876 | - | 306 | Protein_26 | IS91 family transposase ISSbo1 | Transposase |
| KQ258_RS24860 (25902) | 25902..26305 | + | 404 | Protein_27 | IS3 family transposase IS629 | Transposase |
| KQ258_RS24865 (26370) | 26370..27125 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| KQ258_RS24870 (27122) | 27122..28621 | - | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| KQ258_RS24875 (28707) | 28707..29057 | + | 351 | Protein_30 | IS3 family transposase | - |
| KQ258_RS24880 (29730) | 29730..31238 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| KQ258_RS24885 (31322) | 31322..31660 | + | 339 | Protein_32 | IS3 family transposase IS629 | Transposase |
| KQ258_RS24890 (31740) | 31740..32144 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| KQ258_RS24895 (32141) | 32141..32488 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| KQ258_RS24900 (32537) | 32537..33482 | + | 946 | Protein_35 | IS66 family transposase ISEc8 | Transposase |
| KQ258_RS24905 (33568) | 33568..34590 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| KQ258_RS24910 (34587) | 34587..35369 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| KQ258_RS24915 (35437) | 35437..36045 | + | 609 | Protein_38 | IS66 family transposase ISEc22 | Transposase |
| KQ258_RS24920 (36108) | 36108..36899 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| KQ258_RS24925 (36906) | 36906..38876 | - | 1971 | WP_128458777.1 | Hemin receptor | VF |
| KQ258_RS24930 (39158) | 39158..39582 | + | 425 | Protein_41 | IS3 family transposase IS2 | Transposase |
| KQ258_RS24935 (40119) | 40119..40391 | + | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| KQ258_RS24940 (40837) | 40837..41012 | + | 176 | Protein_43 | IS3 family transposase | - |
| KQ258_RS24945 (41238) | 41238..42407 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| KQ258_RS24950 (42774) | 42774..42962 | + | 189 | WP_001332784.1 | hypothetical protein | - |
| KQ258_RS24955 (43083) | 43083..43823 | + | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| KQ258_RS24960 (44066) | 44066..45043 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| KQ258_RS24965 (46218) | 46218..46859 | - | 642 | WP_000990667.1 | hypothetical protein | - |
| KQ258_RS24970 (49181) | 49181..49399 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KQ258_RS24975 (49401) | 49401..49706 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KQ258_RS24980 (49707) | 49707..50516 | + | 810 | WP_000016979.1 | site-specific integrase | - |
| KQ258_RS24985 (50654) | 50654..50929 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| KQ258_RS24990 (50923) | 50923..51567 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| KQ258_RS24995 (51796) | 51796..52767 | + | 972 | WP_001103694.1 | plasmid segregation protein ParM | - |
| KQ258_RS25000 (52772) | 52772..53164 | + | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| KQ258_RS25005 (53169) | 53169..54439 | - | 1271 | Protein_56 | translesion error-prone DNA polymerase V subunit UmuC | - |
| KQ258_RS25010 (54439) | 54439..54876 | - | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KQ258_RS25015 (54873) | 54873..55121 | - | 249 | WP_000619112.1 | DinI-like family protein | - |
| KQ258_RS25020 (55256) | 55256..55774 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| KQ258_RS25025 (55793) | 55793..57013 | + | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| KQ258_RS25030 (57432) | 57432..58262 | + | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| KQ258_RS25035 (58256) | 58256..59053 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| KQ258_RS25040 (59053) | 59053..60225 | - | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| KQ258_RS25045 (60329) | 60329..60469 | + | 141 | Protein_64 | hypothetical protein | - |
| KQ258_RS25050 (60466) | 60466..60777 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| KQ258_RS25055 (60853) | 60853..61536 | + | 684 | WP_000086169.1 | DNA methylase | - |
| KQ258_RS25060 (61537) | 61537..61758 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| KQ258_RS25065 (61688) | 61688..62206 | + | 519 | WP_223364201.1 | DUF1380 family protein | - |
| KQ258_RS25070 (62251) | 62251..63021 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| KQ258_RS25075 (63437) | 63437..63862 | + | 426 | WP_001198903.1 | antirestriction protein | - |
| KQ258_RS25080 (63909) | 63909..64331 | + | 423 | WP_000271708.1 | DUF1380 family protein | - |
| KQ258_RS25085 (64328) | 64328..64519 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| KQ258_RS25095 (65482) | 65482..65712 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| KQ258_RS25100 (65764) | 65764..67125 | + | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| KQ258_RS25105 (67172) | 67172..67735 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| KQ258_RS25110 (67821) | 67821..68273 | - | 453 | WP_024185774.1 | hypothetical protein | - |
| KQ258_RS25115 (68575) | 68575..69102 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| KQ258_RS25120 (69159) | 69159..69392 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| KQ258_RS25125 (69451) | 69451..71409 | + | 1959 | WP_216696532.1 | ParB/RepB/Spo0J family partition protein | - |
| KQ258_RS25130 (71464) | 71464..71898 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| KQ258_RS25135 (71895) | 71895..72658 | + | 764 | Protein_81 | plasmid SOS inhibition protein A | - |
| - (72626) | 72626..72825 | + | 200 | NuclAT_0 | - | - |
| - (72626) | 72626..72825 | + | 200 | NuclAT_0 | - | - |
| - (72626) | 72626..72825 | + | 200 | NuclAT_0 | - | - |
| - (72626) | 72626..72825 | + | 200 | NuclAT_0 | - | - |
| KQ258_RS25655 (72832) | 72832..72981 | + | 150 | Protein_82 | DUF5431 family protein | - |
| KQ258_RS25140 (72923) | 72923..73048 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| KQ258_RS25660 (73366) | 73366..73663 | - | 298 | Protein_84 | hypothetical protein | - |
| KQ258_RS25145 (73964) | 73964..74251 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| KQ258_RS25150 (74370) | 74370..75191 | + | 822 | WP_001234489.1 | DUF932 domain-containing protein | - |
| KQ258_RS25155 (75487) | 75487..76089 | - | 603 | WP_001323326.1 | hypothetical protein | VF |
| KQ258_RS25160 (76420) | 76420..76803 | + | 384 | WP_001151562.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KQ258_RS25165 (76997) | 76997..77683 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| KQ258_RS25170 (77777) | 77777..78004 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| KQ258_RS25175 (78038) | 78038..78397 | + | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| KQ258_RS25180 (78412) | 78412..78723 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| KQ258_RS25185 (78745) | 78745..79311 | + | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| KQ258_RS25190 (79298) | 79298..80026 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| KQ258_RS25195 (80026) | 80026..81453 | + | 1428 | WP_000146665.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KQ258_RS25200 (81443) | 81443..82033 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KQ258_RS25205 (82020) | 82020..82340 | + | 321 | WP_001057274.1 | conjugal transfer protein TrbD | - |
| KQ258_RS25210 (82333) | 82333..82585 | + | 253 | Protein_98 | conjugal transfer protein TrbG | - |
| KQ258_RS25215 (82582) | 82582..83097 | + | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KQ258_RS25220 (83232) | 83232..83453 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| KQ258_RS25225 (83446) | 83446..83919 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| KQ258_RS25230 (83999) | 83999..84217 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| KQ258_RS25235 (84584) | 84584..87214 | + | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| KQ258_RS25240 (87211) | 87211..87597 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| KQ258_RS25245 (87594) | 87594..88226 | + | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| KQ258_RS25250 (88223) | 88223..89215 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| KQ258_RS25255 (89245) | 89245..89550 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| KQ258_RS25260 (89559) | 89559..90197 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KQ258_RS25265 (90194) | 90194..92044 | + | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KQ258_RS25270 (92071) | 92071..92328 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| KQ258_RS25275 (92321) | 92321..93064 | + | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KQ258_RS25280 (93078) | 93078..93419 | + | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| KQ258_RS25285 (93400) | 93400..93735 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| KQ258_RS25290 (93840) | 93840..94490 | + | 651 | WP_021535570.1 | IS66 family transposase IS679 | Transposase |
| KQ258_RS25295 (94490) | 94490..94837 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| KQ258_RS25300 (94857) | 94857..96428 | + | 1572 | WP_021535569.1 | IS66 family transposase ISCro1 | Transposase |
| KQ258_RS25305 (96528) | 96528..96812 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KQ258_RS25310 (96799) | 96799..97344 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KQ258_RS25315 (97274) | 97274..97621 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| KQ258_RS25320 (97602) | 97602..97994 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| KQ258_RS25325 (97981) | 97981..99354 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| KQ258_RS25330 (99351) | 99351..102173 | + | 2823 | WP_001007080.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KQ258_RS25335 (102189) | 102189..102674 | + | 486 | WP_000605869.1 | hypothetical protein | - |
| KQ258_RS25340 (102744) | 102744..103454 | + | 711 | WP_042032882.1 | conjugal transfer complement resistance protein TraT | - |
| KQ258_RS25345 (103657) | 103657..104394 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| KQ258_RS25350 (104445) | 104445..106589 | + | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| KQ258_RS25355 (106589) | 106589..111859 | + | 5271 | WP_216696533.1 | Multifunctional conjugation protein TraI | Relaxase |
| KQ258_RS25360 (111879) | 111879..112625 | + | 747 | WP_032269708.1 | conjugal transfer pilus acetylase TraX | - |
| KQ258_RS25365 (112684) | 112684..113544 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| KQ258_RS25370 (113647) | 113647..114207 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| KQ258_RS25375 (114336) | 114336..114548 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| KQ258_RS25380 (114793) | 114793..115254 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| KQ258_RS25385 (115300) | 115300..115509 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| KQ258_RS25390 (115547) | 115547..116137 | + | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| KQ258_RS25395 (116377) | 116377..116637 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| KQ258_RS25665 (116741) | 116741..116924 | + | 184 | Protein_136 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|