MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90896 bp
Accession: NZ_CP076650 Location: 1..90896 Organism: Escherichia coli strain GD33 Replicon: plasmid pNDM33-3
Accession: NZ_CP076650 Location: 1..90896 Organism: Escherichia coli strain GD33 Replicon: plasmid pNDM33-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KP013_RS25115 (KP013_25115) | 623..1337 | + | 715 | Protein_1 | IS6 family transposase IS15DI | Transposase |
| KP013_RS25120 (KP013_25120) | 1376..2132 | + | 757 | Protein_2 | IS110 family transposase IS4321 | Transposase |
| KP013_RS25895 | 2404..2490 | - | 87 | Protein_3 | Arm DNA-binding domain-containing protein | - |
| KP013_RS25130 (KP013_25130) | 2820..3635 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| KP013_RS25135 (KP013_25135) | 3722..3964 | + | 243 | Protein_5 | phosphoglucosamine mutase | - |
| KP013_RS25140 (KP013_25140) | 4200..5693 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| KP013_RS25145 (KP013_25145) | 5904..6128 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| KP013_RS25150 (KP013_25150) | 6125..6862 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KP013_RS25155 (KP013_25155) | 7348..7488 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| KP013_RS25160 (KP013_25160) | 7494..8198 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KP013_RS25165 (KP013_25165) | 8328..9464 | + | 1137 | WP_000080861.1 | DUF3883 domain-containing protein | - |
| KP013_RS25170 (KP013_25170) | 9579..10949 | + | 1371 | WP_000971921.1 | IS1182 family transposase ISCfr1 | Transposase |
| KP013_RS25175 (KP013_25175) | 11770..12630 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| KP013_RS25180 (KP013_25180) | 12800..13555 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| KP013_RS25185 (KP013_25185) | 13636..13914 | - | 279 | Protein_15 | hypothetical protein | - |
| KP013_RS25190 (KP013_25190) | 14148..15689 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| KP013_RS25195 (KP013_25195) | 16094..16933 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| KP013_RS25200 (KP013_25200) | 16927..17274 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| KP013_RS25205 (KP013_25205) | 17391..18229 | - | 839 | Protein_19 | Streptomycin 3''-adenylyltransferase | ARG |
| KP013_RS25210 (KP013_25210) | 18235..18525 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| KP013_RS25215 (KP013_25215) | 18637..19134 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| KP013_RS25220 (KP013_25220) | 19279..20292 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| KP013_RS25225 (KP013_25225) | 20352..21056 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KP013_RS25230 (KP013_25230) | 21121..21330 | + | 210 | Protein_24 | IS1 family transposase | - |
| KP013_RS25235 (KP013_25235) | 22628..22807 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| KP013_RS25240 (KP013_25240) | 22923..23567 | - | 645 | WP_216691663.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KP013_RS25245 (KP013_25245) | 23862..24482 | + | 621 | WP_000864788.1 | ParA family protein | - |
| KP013_RS25250 (KP013_25250) | 24534..24764 | + | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
| KP013_RS25255 (KP013_25255) | 25188..26252 | + | 1065 | WP_012291478.1 | ParA family protein | - |
| KP013_RS25260 (KP013_25260) | 26790..27143 | - | 354 | WP_024129958.1 | DNA distortion polypeptide 3 | - |
| KP013_RS25265 (KP013_25265) | 27280..27726 | - | 447 | WP_001074384.1 | hypothetical protein | - |
| KP013_RS25270 (KP013_25270) | 27730..28572 | - | 843 | WP_000435064.1 | replication initiation protein | - |
| KP013_RS25275 (KP013_25275) | 28593..29432 | - | 840 | WP_024129959.1 | replication initiation protein | - |
| KP013_RS25280 (KP013_25280) | 30667..30918 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| KP013_RS25285 (KP013_25285) | 30908..31189 | + | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KP013_RS25290 (KP013_25290) | 31428..31520 | - | 93 | Protein_36 | IS6 family transposase | - |
| KP013_RS25295 (KP013_25295) | 31686..32885 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| KP013_RS25300 (KP013_25300) | 32895..33083 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| KP013_RS25305 (KP013_25305) | 33203..34633 | + | 1431 | Protein_39 | IS4 family transposase IS50R | Transposase |
| KP013_RS25310 (KP013_25310) | 34662..35456 | + | 795 | WP_000572405.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| KP013_RS25315 (KP013_25315) | 35477..35713 | + | 237 | Protein_41 | hypothetical protein | - |
| KP013_RS25320 (KP013_25320) | 35763..36467 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KP013_RS25325 (KP013_25325) | 36569..37048 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| KP013_RS25330 (KP013_25330) | 37118..40270 | - | 3153 | WP_212400443.1 | Efflux pump membrane transporter BepE | VF |
| KP013_RS25335 (KP013_25335) | 40294..41469 | - | 1176 | WP_063865358.1 | Efflux pump periplasmic linker BepF | VF |
| KP013_RS25340 (KP013_25340) | 41789..42493 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KP013_RS25345 (KP013_25345) | 42828..43220 | + | 393 | WP_057109146.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| KP013_RS25350 (KP013_25350) | 43540..43926 | - | 387 | WP_063102497.1 | bleomycin binding protein | - |
| KP013_RS25355 (KP013_25355) | 44120..44824 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KP013_RS25360 (KP013_25360) | 44886..45479 | - | 594 | Protein_50 | IS4 family transposase IS186B | Transposase |
| KP013_RS25365 (KP013_25365) | 45568..46557 | - | 990 | WP_052935737.1 | IS91 family transposase ISWz1 | Transposase |
| KP013_RS25375 (KP013_25375) | 47699..47971 | - | 273 | Protein_53 | RepA protein | - |
| KP013_RS25380 (KP013_25380) | 48244..49962 | - | 1719 | WP_063116709.1 | hybrid sensor histidine kinase/response regulator | - |
| KP013_RS25385 (KP013_25385) | 49959..50447 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| KP013_RS25390 (KP013_25390) | 50440..51423 | - | 984 | WP_039267228.1 | hypothetical protein | - |
| KP013_RS25395 (KP013_25395) | 51427..52332 | - | 906 | WP_011264037.1 | helix-turn-helix domain-containing protein | - |
| KP013_RS25400 (KP013_25400) | 52655..52963 | + | 309 | WP_001776105.1 | hypothetical protein | - |
| KP013_RS25405 (KP013_25405) | 52956..53171 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| KP013_RS25410 (KP013_25410) | 53174..53836 | + | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| KP013_RS25415 (KP013_25415) | 53847..54146 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| KP013_RS25420 (KP013_25420) | 54156..56906 | + | 2751 | WP_216691661.1 | Type IV secretion system protein virB4 | VF |
| KP013_RS25425 (KP013_25425) | 56925..57641 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| KP013_RS25430 (KP013_25430) | 57653..57937 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| KP013_RS25435 (KP013_25435) | 57955..58962 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| KP013_RS25440 (KP013_25440) | 59039..59179 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| KP013_RS25445 (KP013_25445) | 59172..59858 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| KP013_RS25450 (KP013_25450) | 59851..60744 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| KP013_RS25455 (KP013_25455) | 60741..61937 | + | 1197 | WP_000980841.1 | Type IV secretion system protein virB10 | VF |
| KP013_RS25460 (KP013_25460) | 61941..62990 | + | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| KP013_RS25465 (KP013_25465) | 62977..63378 | + | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| KP013_RS25470 (KP013_25470) | 63469..63786 | + | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| KP013_RS25475 (KP013_25475) | 63813..64148 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| KP013_RS25480 (KP013_25480) | 64124..64432 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| KP013_RS25485 (KP013_25485) | 64429..65970 | + | 1542 | Protein_75 | DNA topoisomerase | - |
| KP013_RS25490 (KP013_25490) | 66089..66277 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| KP013_RS25495 (KP013_25495) | 66287..67486 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| KP013_RS25500 (KP013_25500) | 67617..68318 | + | 702 | WP_253918818.1 | type IA DNA topoisomerase | - |
| KP013_RS25505 (KP013_25505) | 68315..68707 | + | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| KP013_RS25510 (KP013_25510) | 69416..71323 | + | 1908 | WP_159198374.1 | type IV secretion system DNA-binding domain-containing protein | - |
| KP013_RS25515 (KP013_25515) | 71338..72084 | + | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| KP013_RS25520 (KP013_25520) | 72077..72604 | + | 528 | WP_001232861.1 | Phospholipase D | VF |
| KP013_RS25525 (KP013_25525) | 72636..73067 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| KP013_RS25530 (KP013_25530) | 73199..73375 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| KP013_RS25535 (KP013_25535) | 73547..74512 | - | 966 | WP_023281075.1 | zincin-like metallopeptidase domain-containing protein | - |
| KP013_RS25540 (KP013_25540) | 74964..75389 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KP013_RS25545 (KP013_25545) | 75389..76660 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| KP013_RS25550 (KP013_25550) | 76739..76990 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| KP013_RS25555 (KP013_25555) | 77044..77349 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| KP013_RS25560 (KP013_25560) | 78297..79268 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| KP013_RS25565 (KP013_25565) | 79268..80434 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| KP013_RS25570 (KP013_25570) | 81175..82185 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| KP013_RS25575 (KP013_25575) | 82351..83898 | - | 1548 | Protein_93 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| KP013_RS25580 (KP013_25580) | 84265..85473 | + | 1209 | WP_053884015.1 | MFS transporter | - |
| KP013_RS25585 (KP013_25585) | 85640..86128 | + | 489 | WP_015060468.1 | isochorismatase family protein | - |
| KP013_RS25590 (KP013_25590) | 86285..87031 | + | 747 | WP_052935596.1 | LysO family transporter | - |
| KP013_RS25595 (KP013_25595) | 87008..87850 | - | 843 | Protein_97 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KP013_RS25600 (KP013_25600) | 88126..88479 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| KP013_RS25605 (KP013_25605) | 88527..88889 | + | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| KP013_RS25610 (KP013_25610) | 88907..90658 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|