MGE detailed information
MGE type: Mobilizable plasmid MGE length: 79203 bp
Accession: NZ_CP076649 Location: 1..79203 Organism: Escherichia coli strain GD33 Replicon: plasmid pNDM33-4
Accession: NZ_CP076649 Location: 1..79203 Organism: Escherichia coli strain GD33 Replicon: plasmid pNDM33-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KP013_RS24675 (658) | 658..912 | + | 255 | Protein_1 | hypothetical protein | - |
| KP013_RS25860 (916) | 916..1507 | + | 592 | Protein_2 | hypothetical protein | - |
| KP013_RS25865 (1770) | 1770..2258 | + | 489 | WP_236922184.1 | hypothetical protein | VF |
| KP013_RS25870 (2639) | 2639..2818 | - | 180 | WP_253918817.1 | hypothetical protein | - |
| KP013_RS24690 (3513) | 3513..4129 | + | 617 | Protein_5 | ProQ/FINO family protein | - |
| KP013_RS24695 (4422) | 4422..5459 | - | 1038 | WP_044502555.1 | permease | - |
| KP013_RS24700 (5564) | 5564..5887 | + | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| KP013_RS24705 (6086) | 6086..6790 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KP013_RS24710 (6844) | 6844..7446 | + | 603 | Protein_9 | IS91 family transposase ISSbo1 | Transposase |
| KP013_RS24715 (7612) | 7612..7704 | + | 93 | Protein_10 | IS6 family transposase | - |
| KP013_RS24720 (7943) | 7943..8224 | - | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KP013_RS24725 (8214) | 8214..8465 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| KP013_RS24730 (9700) | 9700..10539 | + | 840 | WP_024129959.1 | replication initiation protein | - |
| KP013_RS24735 (10560) | 10560..11402 | + | 843 | WP_000435064.1 | replication initiation protein | - |
| KP013_RS24740 (11406) | 11406..11852 | + | 447 | WP_001074384.1 | hypothetical protein | - |
| KP013_RS24745 (11989) | 11989..12342 | + | 354 | WP_024129958.1 | DNA distortion polypeptide 3 | - |
| KP013_RS24750 (12880) | 12880..13944 | - | 1065 | WP_012291478.1 | ParA family protein | - |
| KP013_RS24755 (14368) | 14368..14598 | - | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
| KP013_RS24760 (14650) | 14650..15270 | - | 621 | WP_000864788.1 | ParA family protein | - |
| KP013_RS24765 (15565) | 15565..16209 | + | 645 | WP_001376796.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KP013_RS24770 (16364) | 16364..16447 | - | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| - (16730) | 16730..16762 | + | 33 | NuclAT_0 | - | - |
| - (16730) | 16730..16762 | + | 33 | NuclAT_0 | - | - |
| - (16730) | 16730..16762 | + | 33 | NuclAT_0 | - | - |
| - (16730) | 16730..16762 | + | 33 | NuclAT_0 | - | - |
| KP013_RS24775 (17418) | 17418..18209 | + | 792 | WP_050394548.1 | hypothetical protein | - |
| KP013_RS24780 (18350) | 18350..19864 | - | 1515 | Protein_23 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KP013_RS24785 (19930) | 19930..20139 | + | 210 | Protein_24 | IS6 family transposase IS15DII | Transposase |
| KP013_RS25875 (20431) | 20431..20679 | + | 249 | WP_065809026.1 | IS6 family transposase IS15DII | Transposase |
| KP013_RS24795 (20697) | 20697..21038 | - | 342 | WP_004202492.1 | Multiple antibiotic resistance protein MarA | VF |
| KP013_RS25880 (21069) | 21069..21155 | - | 87 | Protein_27 | hypothetical protein | - |
| KP013_RS24800 (21158) | 21158..21406 | - | 249 | Protein_28 | IS1380 family transposase ISEcp1 | Transposase |
| KP013_RS24805 (23558) | 23558..24154 | - | 597 | WP_000583524.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| KP013_RS24810 (24211) | 24211..24915 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KP013_RS24815 (24979) | 24979..26592 | + | 1614 | Protein_31 | Tn3 family transposase ISEc63 | Transposase |
| KP013_RS24820 (26643) | 26643..27347 | - | 705 | WP_216691660.1 | IS6 family transposase IS26 | Transposase |
| KP013_RS24825 (27594) | 27594..28067 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| KP013_RS24830 (28095) | 28095..28933 | - | 839 | Protein_34 | Streptomycin 3''-adenylyltransferase | ARG |
| KP013_RS24835 (28950) | 28950..29750 | - | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| KP013_RS24840 (30015) | 30015..31274 | - | 1260 | WP_012300772.1 | Bicyclomycin resistance protein | ARG |
| KP013_RS24845 (31595) | 31595..32047 | - | 453 | WP_000237816.1 | hypothetical protein | ARG |
| KP013_RS24850 (32220) | 32220..32711 | + | 492 | Protein_38 | IS91 family transposase ISAzo26 | Transposase |
| KP013_RS24855 (32755) | 32755..33459 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KP013_RS24860 (33527) | 33527..34885 | + | 1359 | Protein_40 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KP013_RS24865 (34943) | 34943..35185 | + | 243 | WP_000844627.1 | transposase | - |
| KP013_RS24870 (35217) | 35217..35867 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| KP013_RS24875 (35973) | 35973..37172 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| KP013_RS24880 (37204) | 37204..38088 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| KP013_RS24885 (38180) | 38180..38884 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KP013_RS24890 (38957) | 38957..39181 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| KP013_RS24895 (39392) | 39392..40885 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| KP013_RS25885 (40916) | 40916..41800 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| KP013_RS24905 (42017) | 42017..43231 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| KP013_RS24910 (43259) | 43259..43564 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| KP013_RS24915 (43676) | 43676..43864 | + | 189 | Protein_51 | IS91 family transposase | - |
| KP013_RS24920 (43831) | 43831..45030 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| KP013_RS24925 (45136) | 45136..45786 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| KP013_RS24930 (45818) | 45818..46060 | - | 243 | WP_000844627.1 | transposase | - |
| KP013_RS24935 (46366) | 46366..47202 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| KP013_RS24940 (47202) | 47202..48005 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| KP013_RS24945 (48066) | 48066..48881 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| KP013_RS25890 (49211) | 49211..49297 | + | 87 | Protein_58 | Arm DNA-binding domain-containing protein | - |
| KP013_RS24955 (49569) | 49569..50324 | - | 756 | Protein_59 | IS110 family transposase IS5075 | Transposase |
| KP013_RS24960 (50377) | 50377..51081 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KP013_RS24965 (51467) | 51467..51883 | + | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| KP013_RS24970 (51888) | 51888..52406 | - | 519 | WP_014839979.1 | FidL-like protein | - |
| KP013_RS24975 (52406) | 52406..53194 | - | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| KP013_RS24980 (53214) | 53214..53639 | - | 426 | Protein_64 | TetR/AcrR family transcriptional regulator | - |
| KP013_RS24985 (53694) | 53694..54398 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KP013_RS24990 (54464) | 54464..55978 | + | 1515 | Protein_66 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KP013_RS24995 (56011) | 56011..56244 | - | 234 | Protein_67 | transposase | - |
| KP013_RS25000 (56826) | 56826..57212 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| KP013_RS25005 (57352) | 57352..58320 | - | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| KP013_RS25010 (59427) | 59427..59735 | - | 309 | Protein_70 | replication initiation protein | - |
| KP013_RS25020 (60594) | 60594..62081 | - | 1488 | Protein_72 | group II intron reverse transcriptase/maturase | - |
| KP013_RS25025 (62487) | 62487..62918 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KP013_RS25030 (62918) | 62918..64189 | + | 1272 | WP_001754953.1 | Y-family DNA polymerase | - |
| KP013_RS25035 (64271) | 64271..65245 | - | 975 | WP_000064119.1 | ParB family protein | - |
| KP013_RS25040 (65245) | 65245..66450 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| KP013_RS25045 (66865) | 66865..67134 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| KP013_RS25050 (67311) | 67311..68177 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| KP013_RS25055 (68707) | 68707..68811 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| KP013_RS25060 (68940) | 68940..69197 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| KP013_RS25065 (69255) | 69255..70031 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| KP013_RS25070 (70028) | 70028..70771 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| KP013_RS25075 (70822) | 70822..71172 | - | 351 | WP_060614377.1 | hypothetical protein | - |
| KP013_RS25080 (71724) | 71724..72812 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| KP013_RS25085 (72814) | 72814..75039 | + | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| KP013_RS25090 (75089) | 75089..75988 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| KP013_RS25095 (75978) | 75978..76268 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| KP013_RS25100 (76564) | 76564..76794 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| KP013_RS25105 (76791) | 76791..77207 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|