MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67321 bp
Accession: NZ_CP076529 Location: 1..67321 Organism: Escherichia coli strain L3452210II Replicon: plasmid pL3452210II_2
Accession: NZ_CP076529 Location: 1..67321 Organism: Escherichia coli strain L3452210II Replicon: plasmid pL3452210II_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KPE21_RS23250 (KPE21_23250) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| KPE21_RS23255 (KPE21_23255) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| KPE21_RS23260 (KPE21_23260) | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| KPE21_RS24345 | 2373..2662 | - | 290 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KPE21_RS23265 (KPE21_23265) | 2649..2917 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| KPE21_RS23270 (KPE21_23270) | 3449..4618 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| KPE21_RS23275 (KPE21_23275) | 4651..4779 | + | 129 | Protein_6 | IS481 family transposase | - |
| KPE21_RS23280 (KPE21_23280) | 4814..5002 | - | 189 | Protein_7 | hypothetical protein | - |
| KPE21_RS23285 (KPE21_23285) | 5050..5747 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| KPE21_RS23290 (KPE21_23290) | 5916..6509 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| KPE21_RS23295 (KPE21_23295) | 6622..7827 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| KPE21_RS23300 (KPE21_23300) | 7909..8532 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| KPE21_RS23305 (KPE21_23305) | 8510..8629 | - | 120 | Protein_12 | transcriptional regulator | - |
| KPE21_RS23315 (KPE21_23315) | 9393..9728 | - | 336 | WP_258192846.1 | hypothetical protein | - |
| KPE21_RS23320 (KPE21_23320) | 9753..10457 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KPE21_RS23325 (KPE21_23325) | 10518..11354 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| KPE21_RS23330 (KPE21_23330) | 11354..12157 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| KPE21_RS23335 (KPE21_23335) | 12218..13033 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| KPE21_RS23340 (KPE21_23340) | 13341..14192 | - | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| KPE21_RS23345 (KPE21_23345) | 14179..14898 | - | 720 | Protein_20 | helicase RepA family protein | - |
| KPE21_RS23350 (KPE21_23350) | 14948..15652 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KPE21_RS23355 (KPE21_23355) | 15689..16816 | - | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| KPE21_RS23360 (KPE21_23360) | 16867..17094 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| KPE21_RS23365 (KPE21_23365) | 17118..17309 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| KPE21_RS23370 (KPE21_23370) | 17791..18333 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| KPE21_RS23375 (KPE21_23375) | 18346..19206 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| KPE21_RS23380 (KPE21_23380) | 19349..20254 | + | 906 | Protein_27 | IS4 family transposase IS10R | Transposase |
| KPE21_RS23385 (KPE21_23385) | 20303..21007 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KPE21_RS23390 (KPE21_23390) | 21249..22109 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| KPE21_RS23395 (KPE21_23395) | 22259..22357 | - | 99 | Protein_30 | IS1 family transposase | - |
| KPE21_RS23400 (KPE21_23400) | 22386..23696 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| KPE21_RS23405 (KPE21_23405) | 23981..24382 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| KPE21_RS23410 (KPE21_23410) | 24315..24572 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| KPE21_RS23415 (KPE21_23415) | 24665..25318 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| KPE21_RS23420 (KPE21_23420) | 26257..27114 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| KPE21_RS23425 (KPE21_23425) | 27107..27181 | - | 75 | WP_014966221.1 | RepA leader peptide Tap | - |
| KPE21_RS23430 (KPE21_23430) | 27181..27312 | - | 132 | Protein_37 | protein CopA/IncA | - |
| KPE21_RS23435 (KPE21_23435) | 27642..28139 | - | 498 | WP_042045560.1 | single-stranded DNA-binding protein | - |
| KPE21_RS23440 (KPE21_23440) | 28289..30190 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| KPE21_RS24350 | 30868..31074 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| KPE21_RS24355 | 31315..31572 | - | 258 | WP_023147917.1 | hypothetical protein | - |
| KPE21_RS23445 (KPE21_23445) | 31485..31697 | - | 213 | WP_001348622.1 | hypothetical protein | - |
| KPE21_RS23450 (KPE21_23450) | 31723..32286 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| KPE21_RS23455 (KPE21_23455) | 32334..33695 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| KPE21_RS23460 (KPE21_23460) | 33747..33977 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| KPE21_RS23465 (KPE21_23465) | 35012..35203 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| KPE21_RS23470 (KPE21_23470) | 35200..35622 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| KPE21_RS23475 (KPE21_23475) | 35669..36094 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| KPE21_RS23480 (KPE21_23480) | 36511..37287 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| KPE21_RS23485 (KPE21_23485) | 37338..37856 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| KPE21_RS23490 (KPE21_23490) | 37786..38007 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| KPE21_RS23495 (KPE21_23495) | 38008..38691 | - | 684 | WP_000086185.1 | DNA methylase | - |
| KPE21_RS23500 (KPE21_23500) | 38768..39079 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| KPE21_RS23505 (KPE21_23505) | 39076..39978 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| KPE21_RS23510 (KPE21_23510) | 40845..41816 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| KPE21_RS23515 (KPE21_23515) | 41816..42982 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| KPE21_RS23520 (KPE21_23520) | 43570..44325 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| KPE21_RS23525 (KPE21_23525) | 45099..45905 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| KPE21_RS23530 (KPE21_23530) | 45906..46211 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KPE21_RS23535 (KPE21_23535) | 46213..46431 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KPE21_RS23540 (KPE21_23540) | 47065..47262 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| KPE21_RS23545 (KPE21_23545) | 47259..47543 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| KPE21_RS23550 (KPE21_23550) | 47563..48696 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| KPE21_RS23555 (KPE21_23555) | 48959..52078 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| KPE21_RS23560 (KPE21_23560) | 52385..52615 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| KPE21_RS23565 (KPE21_23565) | 52612..53028 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| KPE21_RS23570 (KPE21_23570) | 53190..55328 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| KPE21_RS23575 (KPE21_23575) | 55793..56788 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| KPE21_RS23580 (KPE21_23580) | 56831..57724 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| KPE21_RS23590 (KPE21_23590) | 58772..61888 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
| KPE21_RS23595 (KPE21_23595) | 62010..63281 | - | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
| KPE21_RS23600 (KPE21_23600) | 63278..64834 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| KPE21_RS23605 (KPE21_23605) | 65017..65238 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| KPE21_RS23610 (KPE21_23610) | 65238..65618 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| KPE21_RS23615 (KPE21_23615) | 65623..65802 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| KPE21_RS23620 (KPE21_23620) | 65830..66108 | + | 279 | Protein_77 | pdcB | - |
| KPE21_RS23625 (KPE21_23625) | 66113..66526 | + | 414 | Protein_78 | integrase core domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|