MGE detailed information
MGE type: Genomic_island MGE length: 9049 bp
Accession: NZ_CP076404 Location: 4520860..4529908 Organism: Escherichia coli strain K-12 substr. AB1157 Replicon: chromosome
Accession: NZ_CP076404 Location: 4520860..4529908 Organism: Escherichia coli strain K-12 substr. AB1157 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJY95_RS21865 (4517444) | 4517444..4518364 | + | 921 | Protein_4257 | Rpn family recombination-promoting nuclease/putative transposase | - |
| KJY95_RS21870 (4518608) | 4518608..4520020 | - | 1413 | WP_000199300.1 | PLP-dependent aminotransferase family protein | - |
| KJY95_RS21875 (4520197) | 4520197..4520361 | + | 165 | WP_000394280.1 | DUF1127 domain-containing protein | - |
| KJY95_RS21880 (4520860) | 4520860..4522368 | + | 1509 | Protein_4260 | protein YjiT | - |
| KJY95_RS21885 (4522365) | 4522365..4525301 | + | 2937 | Protein_4261 | hypothetical protein | - |
| KJY95_RS21890 (4525358) | 4525358..4526404 | - | 1047 | WP_000437621.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| KJY95_RS21895 (4526404) | 4526404..4527783 | - | 1380 | WP_000443951.1 | 5-methylcytosine-specific restriction endonuclease subunit McrB | - |
| KJY95_RS21900 (4527945) | 4527945..4528286 | - | 342 | WP_000132601.1 | endoribonuclease SymE | Toxin Detail |
| - (4528281) | 4528281..4528357 | + | 77 | NuclAT_12 | - | Antitoxin Detail |
| - (4528281) | 4528281..4528357 | + | 77 | NuclAT_12 | - | Antitoxin Detail |
| - (4528281) | 4528281..4528357 | + | 77 | NuclAT_12 | - | Antitoxin Detail |
| - (4528281) | 4528281..4528357 | + | 77 | NuclAT_12 | - | Antitoxin Detail |
| - (4528281) | 4528281..4528357 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - (4528281) | 4528281..4528357 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - (4528281) | 4528281..4528357 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - (4528281) | 4528281..4528357 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| KJY95_RS21905 (4528514) | 4528514..4529908 | - | 1395 | WP_001272447.1 | type I restriction-modification system specificity subunit | - |
| KJY95_RS21910 (4529905) | 4529905..4531494 | - | 1590 | WP_001063204.1 | type I restriction-modification system methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20090 | HG738867 | 4458009..4467057 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6352 | NC_000913 | 4572414..4581462 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21461 | NC_007779 | 4577094..4586142 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA6351 | NC_012759 | 4508921..4517969 | 0 | |
| Escherichia coli DH1 | Genomic island | TA27427 | NC_017638 | 4552192..4561240 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48706 | NZ_CP009273 | 4562231..4571279 | 0 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90501 | NZ_CP025520 | 3428612..3437660 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285035 | NZ_HG738867 | 4458009..4467057 | 0 |