MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 44199 bp
Accession: NZ_CP076346 Location: 1..44199 Organism: Escherichia coli strain AVS0096 Replicon: plasmid pAVS0096-b
Accession: NZ_CP076346 Location: 1..44199 Organism: Escherichia coli strain AVS0096 Replicon: plasmid pAVS0096-b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KM937_RS24430 (309) | 309..1112 | - | 804 | WP_021528068.1 | class I SAM-dependent methyltransferase | - |
| KM937_RS24435 (1109) | 1109..2323 | - | 1215 | WP_021528067.1 | MFS transporter | - |
| KM937_RS24440 (2320) | 2320..3447 | - | 1128 | WP_225377703.1 | ThiF family adenylyltransferase | - |
| KM937_RS24985 (4284) | 4284..4409 | - | 126 | WP_260765734.1 | hypothetical protein | - |
| KM937_RS24450 (4617) | 4617..5024 | - | 408 | WP_001546356.1 | hypothetical protein | - |
| KM937_RS24455 (5079) | 5079..5543 | - | 465 | WP_085448589.1 | H-NS family nucleoid-associated regulatory protein | - |
| KM937_RS24460 (5559) | 5559..5765 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| KM937_RS24465 (5762) | 5762..7915 | - | 2154 | WP_171848481.1 | type IA DNA topoisomerase | - |
| KM937_RS24470 (8002) | 8002..8304 | - | 303 | WP_085448588.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| KM937_RS24475 (8301) | 8301..8714 | - | 414 | WP_000722604.1 | cag pathogenicity island Cag12 family protein | - |
| KM937_RS24480 (8711) | 8711..10546 | - | 1836 | WP_085448587.1 | type IV secretory system conjugative DNA transfer family protein | - |
| KM937_RS24485 (10549) | 10549..11580 | - | 1032 | WP_085448586.1 | Type IV secretion system protein VirB11 | VF |
| KM937_RS24490 (11582) | 11582..12787 | - | 1206 | WP_065622023.1 | Type IV secretion system protein virB10 | VF |
| KM937_RS24495 (12784) | 12784..13713 | - | 930 | WP_000783375.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| KM937_RS24500 (13718) | 13718..14431 | - | 714 | WP_171848480.1 | Type IV secretion system protein PtlE | VF |
| KM937_RS24505 (14677) | 14677..15738 | - | 1062 | WP_085448585.1 | hypothetical protein | VF |
| KM937_RS24510 (15750) | 15750..16034 | - | 285 | WP_085448584.1 | EexN family lipoprotein | - |
| KM937_RS24515 (16049) | 16049..16798 | - | 750 | WP_000744199.1 | type IV secretion system protein | - |
| KM937_RS24520 (16809) | 16809..18803 | - | 1995 | WP_072107035.1 | Type IV secretion system protein virB4 | VF |
| KM937_RS24915 (19374) | 19374..19562 | - | 189 | Protein_20 | Type IV secretion system protein virB4 | VF |
| KM937_RS24525 (19584) | 19584..19880 | - | 297 | WP_016247739.1 | TrbC/VirB2 family protein | - |
| KM937_RS24530 (19858) | 19858..20505 | - | 648 | WP_016247740.1 | Type IV secretion system protein virB1 | VF |
| KM937_RS24535 (20538) | 20538..20750 | - | 213 | WP_000125172.1 | hypothetical protein | - |
| KM937_RS24540 (20680) | 20680..21198 | - | 519 | WP_001446885.1 | transcription termination/antitermination NusG family protein | - |
| KM937_RS24545 (21551) | 21551..22717 | - | 1167 | WP_085448583.1 | hypothetical protein | Relaxase |
| KM937_RS24550 (22720) | 22720..23265 | - | 546 | WP_012301143.1 | DNA distortion polypeptide 1 | - |
| KM937_RS24560 (23596) | 23596..23868 | - | 273 | WP_000167280.1 | hypothetical protein | - |
| KM937_RS24565 (23885) | 23885..24031 | - | 147 | WP_001567307.1 | hypothetical protein | - |
| KM937_RS24570 (24101) | 24101..24280 | - | 180 | WP_000439079.1 | hypothetical protein | - |
| KM937_RS24575 (24322) | 24322..24651 | - | 330 | WP_085448582.1 | hypothetical protein | - |
| KM937_RS24580 (24745) | 24745..24987 | - | 243 | WP_000008708.1 | hypothetical protein | - |
| KM937_RS24585 (24977) | 24977..25246 | - | 270 | WP_001006718.1 | hypothetical protein | - |
| KM937_RS24590 (25255) | 25255..25803 | - | 549 | WP_001178641.1 | hypothetical protein | - |
| KM937_RS24595 (25877) | 25877..26392 | - | 516 | WP_085448581.1 | J domain-containing protein | - |
| KM937_RS24600 (26742) | 26742..27023 | - | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KM937_RS24605 (27013) | 27013..27264 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| KM937_RS24610 (28502) | 28502..29341 | + | 840 | WP_001352874.1 | replication initiation protein | - |
| KM937_RS24615 (29362) | 29362..30204 | + | 843 | WP_072649828.1 | replication initiation protein | - |
| KM937_RS24620 (30208) | 30208..30654 | + | 447 | WP_085448580.1 | hypothetical protein | - |
| KM937_RS24625 (30791) | 30791..31144 | + | 354 | WP_001675596.1 | DNA distortion polypeptide 3 | - |
| KM937_RS24630 (31682) | 31682..32746 | - | 1065 | WP_012291478.1 | ParA family protein | - |
| KM937_RS24635 (33170) | 33170..33400 | - | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
| KM937_RS24640 (33452) | 33452..34072 | - | 621 | WP_000864788.1 | ParA family protein | - |
| KM937_RS24645 (34367) | 34367..35011 | + | 645 | WP_000203203.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KM937_RS24650 (35166) | 35166..35249 | - | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| KM937_RS24655 (35230) | 35230..35541 | + | 312 | WP_162758319.1 | hypothetical protein | - |
| KM937_RS24660 (36118) | 36118..36600 | + | 483 | WP_001546353.1 | hypothetical protein | - |
| KM937_RS24665 (36933) | 36933..37544 | + | 612 | WP_021528072.1 | hypothetical protein | - |
| KM937_RS24670 (37636) | 37636..38145 | + | 510 | WP_000190051.1 | hypothetical protein | - |
| KM937_RS24675 (38251) | 38251..40152 | + | 1902 | WP_085448596.1 | AAA family ATPase | - |
| KM937_RS24680 (40557) | 40557..40736 | - | 180 | WP_000347020.1 | hypothetical protein | - |
| KM937_RS25060 (40803) | 40803..40898 | - | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| - (41229) | 41229..41261 | + | 33 | NuclAT_0 | - | - |
| - (41229) | 41229..41261 | + | 33 | NuclAT_0 | - | - |
| - (41229) | 41229..41261 | + | 33 | NuclAT_0 | - | - |
| - (41229) | 41229..41261 | + | 33 | NuclAT_0 | - | - |
| KM937_RS24685 (41663) | 41663..42697 | + | 1035 | WP_012262113.1 | LD-carboxypeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|