MGE detailed information
MGE type: Prophage MGE length: 50825 bp
Accession: NZ_CP076279 Location: 1557675..1608499 Organism: Escherichia coli strain SA53-3 Replicon: chromosome
Accession: NZ_CP076279 Location: 1557675..1608499 Organism: Escherichia coli strain SA53-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A19_RS07725 (1553664) | 1553664..1553711 | + | 48 | WP_211180494.1 | protein YnaN | - |
| A7A19_RS07730 (1553725) | 1553725..1554708 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| A7A19_RS07735 (1554983) | 1554983..1555156 | + | 174 | WP_001296046.1 | protein YnaL | - |
| A7A19_RS07740 (1555186) | 1555186..1556559 | + | 1374 | WP_000123738.1 | ATP-dependent RNA helicase DbpA | - |
| A7A19_RS07745 (1556688) | 1556688..1557623 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| A7A19_RS07750 (1557675) | 1557675..1558910 | - | 1236 | WP_072017917.1 | Putative defective protein IntQ ; Integrase | Integrase |
| A7A19_RS07755 (1558912) | 1558912..1559127 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1559231) | 1559231..1559409 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1559231) | 1559231..1559409 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1559231) | 1559231..1559409 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1559231) | 1559231..1559409 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| A7A19_RS07760 (1559227) | 1559227..1559415 | - | 189 | WP_001383994.1 | DUF1187 family protein | - |
| A7A19_RS07765 (1559408) | 1559408..1559602 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| A7A19_RS07770 (1559666) | 1559666..1560754 | - | 1089 | WP_021529594.1 | RecT family recombinase | - |
| A7A19_RS07775 (1560769) | 1560769..1563915 | - | 3147 | WP_257122798.1 | exodeoxyribonuclease VIII | - |
| A7A19_RS07780 (1564017) | 1564017..1564292 | - | 276 | WP_000632298.1 | hypothetical protein | - |
| A7A19_RS07785 (1564367) | 1564367..1564537 | - | 171 | WP_087907244.1 | YdaE family protein | - |
| A7A19_RS07790 (1564537) | 1564537..1564758 | - | 222 | WP_000560220.1 | killing protein KilR | - |
| A7A19_RS07795 (1565156) | 1565156..1565389 | + | 234 | WP_097446403.1 | hypothetical protein | - |
| A7A19_RS07800 (1565351) | 1565351..1565656 | - | 306 | WP_161622426.1 | hypothetical protein | - |
| A7A19_RS07805 (1565908) | 1565908..1566369 | - | 462 | WP_000753628.1 | helix-turn-helix domain-containing protein | - |
| A7A19_RS07810 (1566477) | 1566477..1566725 | + | 249 | WP_063102143.1 | YdaS family helix-turn-helix protein | - |
| A7A19_RS07815 (1566736) | 1566736..1567158 | + | 423 | WP_096124037.1 | toxin YdaT family protein | - |
| A7A19_RS07820 (1567222) | 1567222..1568241 | + | 1020 | WP_250696750.1 | DUF1376 domain-containing protein | - |
| A7A19_RS07825 (1568234) | 1568234..1568695 | + | 462 | WP_244586854.1 | replication protein P | - |
| A7A19_RS07830 (1568730) | 1568730..1569491 | + | 762 | WP_161622424.1 | DUF1627 domain-containing protein | - |
| A7A19_RS07835 (1569508) | 1569508..1569930 | + | 423 | WP_161622423.1 | DUF977 family protein | - |
| A7A19_RS07840 (1569927) | 1569927..1570232 | + | 306 | WP_161622422.1 | DUF4406 domain-containing protein | - |
| A7A19_RS07845 (1570219) | 1570219..1570896 | + | 678 | WP_250696749.1 | ead/Ea22-like family protein | - |
| A7A19_RS07850 (1570893) | 1570893..1571147 | + | 255 | WP_044155067.1 | hypothetical protein | - |
| A7A19_RS07855 (1571140) | 1571140..1571451 | + | 312 | WP_001351477.1 | hypothetical protein | - |
| A7A19_RS07860 (1571658) | 1571658..1572352 | + | 695 | WP_257122754.1 | IS1 family transposase IS1N | Transposase |
| A7A19_RS07865 (1572532) | 1572532..1573110 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| A7A19_RS07870 (1573070) | 1573070..1574167 | - | 1098 | WP_000156214.1 | beta family protein | - |
| A7A19_RS07875 (1574725) | 1574725..1574880 | + | 156 | WP_202982212.1 | Hok/Gef family protein | - |
| A7A19_RS07880 (1575205) | 1575205..1575381 | + | 177 | WP_001774829.1 | hypothetical protein | - |
| A7A19_RS07885 (1575441) | 1575441..1576040 | + | 600 | WP_161622419.1 | DUF1367 family protein | - |
| A7A19_RS07890 (1576040) | 1576040..1576330 | + | 291 | WP_161622418.1 | DUF1364 domain-containing protein | - |
| A7A19_RS07895 (1576327) | 1576327..1576863 | + | 537 | WP_161622417.1 | DUF1133 family protein | - |
| A7A19_RS07900 (1577318) | 1577318..1577788 | + | 471 | WP_161622416.1 | subtilase family AB5 toxin binding subunit | - |
| A7A19_RS07905 (1577806) | 1577806..1578549 | + | 744 | WP_161622415.1 | Pertussis toxin subunit 1 | VF |
| A7A19_RS07910 (1579043) | 1579043..1579435 | + | 393 | WP_161622414.1 | putative holin | - |
| A7A19_RS07915 (1579425) | 1579425..1579703 | + | 279 | WP_161622413.1 | phage holin family protein | - |
| A7A19_RS07920 (1579705) | 1579705..1580250 | + | 546 | WP_161622412.1 | glycosyl hydrolase 108 family protein | - |
| A7A19_RS07925 (1580340) | 1580340..1581119 | + | 780 | WP_161622411.1 | Heat-labile enterotoxin IIB, A chain | VF |
| A7A19_RS07930 (1581109) | 1581109..1581480 | + | 372 | WP_000095643.1 | enterotoxin | - |
| A7A19_RS07935 (1581649) | 1581649..1582593 | + | 945 | Protein_1550 | terminase small subunit | - |
| A7A19_RS07940 (1582583) | 1582583..1583911 | + | 1329 | WP_257122803.1 | terminase | - |
| A7A19_RS07945 (1583930) | 1583930..1585366 | + | 1437 | WP_257122805.1 | DUF1073 domain-containing protein | - |
| A7A19_RS07950 (1585311) | 1585311..1586144 | + | 834 | WP_178085951.1 | hypothetical protein | - |
| A7A19_RS07955 (1586125) | 1586125..1587417 | + | 1293 | WP_000059661.1 | DUF2213 domain-containing protein | - |
| A7A19_RS07960 (1587410) | 1587410..1588027 | + | 618 | WP_001349881.1 | hypothetical protein | - |
| A7A19_RS07965 (1588042) | 1588042..1589070 | + | 1029 | WP_001272370.1 | hypothetical protein | - |
| A7A19_RS07970 (1589127) | 1589127..1589597 | + | 471 | WP_000780861.1 | hypothetical protein | - |
| A7A19_RS07975 (1589597) | 1589597..1590037 | + | 441 | WP_137581430.1 | hypothetical protein | - |
| A7A19_RS07980 (1590034) | 1590034..1590474 | + | 441 | WP_257122806.1 | hypothetical protein | - |
| A7A19_RS07985 (1590461) | 1590461..1591405 | + | 945 | WP_097450078.1 | hypothetical protein | - |
| A7A19_RS07990 (1591405) | 1591405..1592742 | + | 1338 | WP_257122808.1 | hypothetical protein | - |
| A7A19_RS07995 (1592766) | 1592766..1593197 | + | 432 | WP_000613368.1 | hypothetical protein | - |
| A7A19_RS08000 (1593194) | 1593194..1593811 | + | 618 | WP_112015692.1 | hypothetical protein | - |
| A7A19_RS08005 (1593875) | 1593875..1595848 | + | 1974 | WP_257122809.1 | lytic transglycosylase domain-containing protein | - |
| A7A19_RS08010 (1595852) | 1595852..1596520 | + | 669 | WP_050306666.1 | hypothetical protein | - |
| A7A19_RS08015 (1596517) | 1596517..1596783 | + | 267 | WP_000209262.1 | hypothetical protein | - |
| A7A19_RS08020 (1596783) | 1596783..1597790 | + | 1008 | WP_257122810.1 | hypothetical protein | - |
| A7A19_RS08025 (1597790) | 1597790..1598503 | + | 714 | WP_257122811.1 | phage baseplate protein | - |
| A7A19_RS08030 (1598754) | 1598754..1599101 | + | 348 | WP_001261332.1 | hypothetical protein | - |
| A7A19_RS08035 (1599077) | 1599077..1599634 | - | 558 | WP_231290310.1 | antA/AntB antirepressor family protein | - |
| A7A19_RS08040 (1599914) | 1599914..1600378 | - | 465 | WP_257122812.1 | hypothetical protein | - |
| A7A19_RS08045 (1600397) | 1600397..1600945 | - | 549 | WP_097450072.1 | hypothetical protein | - |
| A7A19_RS08050 (1600967) | 1600967..1602193 | + | 1227 | WP_097450071.1 | baseplate J/gp47 family protein | - |
| A7A19_RS08055 (1602177) | 1602177..1602803 | + | 627 | WP_001199731.1 | hypothetical protein | - |
| A7A19_RS08060 (1602800) | 1602800..1604182 | + | 1383 | WP_097452376.1 | phage tail protein | - |
| A7A19_RS08065 (1604197) | 1604197..1604727 | + | 531 | WP_257122813.1 | tail fiber assembly protein | - |
| A7A19_RS08070 (1604751) | 1604751..1607936 | + | 3186 | WP_257122814.1 | prophage tail fiber N-terminal domain-containing protein | - |
| A7A19_RS08075 (1607936) | 1607936..1608499 | + | 564 | WP_257122896.1 | DUF4376 domain-containing protein | - |
| A7A19_RS08080 (1609038) | 1609038..1609472 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| A7A19_RS08085 (1609613) | 1609613..1610746 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|