MGE detailed information
MGE type: Conjugative plasmid MGE length: 88268 bp
Accession: NZ_CP076269 Location: 1..88268 Organism: Escherichia coli strain D217-5 Replicon: plasmid pD217IncF
Accession: NZ_CP076269 Location: 1..88268 Organism: Escherichia coli strain D217-5 Replicon: plasmid pD217IncF
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A16_RS23110 (1) | 1..756 | + | 756 | Protein_0 | replication initiation protein RepE | - |
| A7A16_RS23115 (1344) | 1344..2510 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| A7A16_RS23120 (2510) | 2510..3481 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| A7A16_RS23125 (4391) | 4391..5292 | + | 902 | Protein_3 | DUF1281 domain-containing protein | - |
| A7A16_RS23130 (5296) | 5296..5601 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| A7A16_RS23135 (5678) | 5678..6361 | + | 684 | WP_000085939.1 | DNA methylase | - |
| A7A16_RS23140 (6362) | 6362..6583 | + | 222 | WP_001104904.1 | hypothetical protein | - |
| A7A16_RS23145 (6477) | 6477..7031 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| A7A16_RS23150 (7077) | 7077..7853 | + | 777 | WP_001005032.1 | hypothetical protein | - |
| A7A16_RS23155 (8266) | 8266..8691 | + | 426 | WP_001198920.1 | antirestriction protein | - |
| A7A16_RS23160 (8738) | 8738..9160 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| A7A16_RS23165 (9157) | 9157..9348 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| A7A16_RS23170 (9318) | 9318..9827 | - | 510 | WP_071532140.1 | hypothetical protein | - |
| A7A16_RS23175 (10145) | 10145..10618 | + | 474 | WP_257109156.1 | single-stranded DNA-binding protein | - |
| A7A16_RS23180 (10741) | 10741..10974 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| A7A16_RS23185 (11040) | 11040..12998 | + | 1959 | WP_000117171.1 | ParB/RepB/Spo0J family partition protein | - |
| A7A16_RS23190 (13053) | 13053..13487 | + | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| A7A16_RS23195 (13484) | 13484..14246 | + | 763 | Protein_17 | plasmid SOS inhibition protein A | - |
| - (14215) | 14215..14413 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (14215) | 14215..14413 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (14215) | 14215..14413 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (14215) | 14215..14413 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| A7A16_RS23200 (14420) | 14420..14569 | + | 150 | Protein_18 | DUF5431 family protein | - |
| A7A16_RS23205 (14511) | 14511..14636 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| A7A16_RS23210 (14937) | 14937..15234 | - | 298 | Protein_20 | hypothetical protein | - |
| A7A16_RS23215 (15304) | 15304..15510 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| A7A16_RS23220 (15535) | 15535..15822 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| A7A16_RS23225 (15941) | 15941..16762 | + | 822 | WP_001234475.1 | DUF932 domain-containing protein | - |
| A7A16_RS23230 (17058) | 17058..17648 | - | 591 | WP_001375132.1 | hypothetical protein | VF |
| A7A16_RS23235 (17999) | 17999..18382 | + | 384 | WP_001063021.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| A7A16_RS23240 (18573) | 18573..19220 | + | 648 | WP_000332519.1 | conjugal transfer transcriptional regulator TraJ | - |
| A7A16_RS23245 (19356) | 19356..19571 | + | 216 | WP_000086381.1 | conjugal transfer relaxosome protein TraY | - |
| A7A16_RS23250 (19614) | 19614..20012 | + | 399 | WP_000340281.1 | type IV conjugative transfer system pilin TraA | - |
| A7A16_RS23255 (20027) | 20027..20338 | + | 312 | WP_257109160.1 | type IV conjugative transfer system protein TraL | - |
| A7A16_RS23260 (20360) | 20360..20926 | + | 567 | WP_000399797.1 | type IV conjugative transfer system protein TraE | - |
| A7A16_RS23265 (20913) | 20913..21641 | + | 729 | WP_049033550.1 | type-F conjugative transfer system secretin TraK | - |
| A7A16_RS23270 (21641) | 21641..23068 | + | 1428 | WP_040100311.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| A7A16_RS23275 (23058) | 23058..23648 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| A7A16_RS23280 (23635) | 23635..23832 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| A7A16_RS23285 (23844) | 23844..24095 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| A7A16_RS23290 (24092) | 24092..24607 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A7A16_RS23295 (24742) | 24742..24963 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| A7A16_RS23300 (25123) | 25123..27750 | + | 2628 | WP_049033542.1 | type IV secretion system protein TraC | - |
| A7A16_RS23305 (27747) | 27747..28133 | + | 387 | WP_049033539.1 | type-F conjugative transfer system protein TrbI | - |
| A7A16_RS23310 (28130) | 28130..28762 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| A7A16_RS23315 (28759) | 28759..29751 | + | 993 | WP_049033536.1 | conjugal transfer pilus assembly protein TraU | - |
| A7A16_RS23320 (29760) | 29760..30398 | + | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A7A16_RS23325 (30395) | 30395..32203 | + | 1809 | WP_049033533.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A7A16_RS23330 (32230) | 32230..32487 | + | 258 | WP_049033531.1 | conjugal transfer protein TrbE | - |
| A7A16_RS23335 (32480) | 32480..33223 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A7A16_RS23340 (33239) | 33239..33586 | + | 348 | WP_032341883.1 | conjugal transfer protein TrbA | - |
| A7A16_RS23345 (33944) | 33944..34228 | + | 285 | WP_000624103.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A7A16_RS23350 (34215) | 34215..34760 | + | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A7A16_RS23355 (34690) | 34690..35031 | + | 342 | WP_136824084.1 | P-type conjugative transfer protein TrbJ | - |
| A7A16_RS23360 (35018) | 35018..35410 | + | 393 | WP_001208952.1 | F-type conjugal transfer protein TrbF | - |
| A7A16_RS23365 (35397) | 35397..36770 | + | 1374 | WP_097765513.1 | conjugal transfer pilus assembly protein TraH | - |
| A7A16_RS23370 (36767) | 36767..39589 | + | 2823 | WP_136824085.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| A7A16_RS23375 (39605) | 39605..40102 | + | 498 | WP_000605859.1 | entry exclusion protein | - |
| A7A16_RS23380 (40155) | 40155..40865 | + | 711 | WP_230133085.1 | conjugal transfer complement resistance protein TraT | - |
| A7A16_RS23385 (41118) | 41118..43271 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| A7A16_RS23390 (43280) | 43280..43678 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A7A16_RS23395 (43678) | 43678..43905 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| A7A16_RS23400 (43987) | 43987..49257 | + | 5271 | WP_063069764.1 | Multifunctional conjugation protein TraI | Relaxase |
| A7A16_RS23405 (49277) | 49277..50023 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| A7A16_RS23410 (50082) | 50082..50942 | + | 861 | WP_000704512.1 | putative protein YcjY | VF |
| A7A16_RS23415 (51045) | 51045..51602 | + | 558 | WP_000139319.1 | fertility inhibition protein FinO | - |
| A7A16_RS23420 (51757) | 51757..51960 | + | 204 | WP_001327131.1 | hypothetical protein | - |
| A7A16_RS23425 (52703) | 52703..53164 | + | 462 | WP_000760077.1 | thermonuclease family protein | - |
| - (53824) | 53824..53885 | - | 62 | NuclAT_1 | - | - |
| - (53824) | 53824..53885 | - | 62 | NuclAT_1 | - | - |
| - (53824) | 53824..53885 | - | 62 | NuclAT_1 | - | - |
| - (53824) | 53824..53885 | - | 62 | NuclAT_1 | - | - |
| A7A16_RS23430 (53929) | 53929..54078 | + | 150 | WP_001300273.1 | Hok/Gef family protein | - |
| A7A16_RS23435 (54362) | 54362..54610 | + | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| A7A16_RS23440 (54683) | 54683..54808 | - | 126 | WP_071590472.1 | replication protein RepA | - |
| A7A16_RS23445 (54857) | 54857..54931 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| A7A16_RS23450 (54924) | 54924..55781 | + | 858 | WP_000131011.1 | incFII family plasmid replication initiator RepA | - |
| A7A16_RS23455 (57131) | 57131..57382 | + | 252 | WP_001315600.1 | HTH domain-containing protein | - |
| A7A16_RS23460 (57778) | 57778..57933 | - | 156 | Protein_70 | IS110 family transposase | - |
| A7A16_RS23465 (58274) | 58274..59221 | - | 948 | WP_001253824.1 | DMT family transporter | - |
| A7A16_RS23475 (60023) | 60023..61037 | - | 1015 | Protein_72 | integrase core domain-containing protein | - |
| A7A16_RS23480 (61438) | 61438..62441 | + | 1004 | Protein_73 | IS3 family transposase | - |
| A7A16_RS23485 (62783) | 62783..63619 | + | 837 | WP_163406570.1 | Right origin-binding protein | VF |
| A7A16_RS23490 (64027) | 64027..64303 | + | 277 | Protein_75 | IS3 family transposase | - |
| A7A16_RS23495 (64478) | 64478..64747 | - | 270 | WP_000976359.1 | hypothetical protein | - |
| A7A16_RS23500 (65056) | 65056..69756 | - | 4701 | WP_257109142.1 | putative autotransporter | VF |
| A7A16_RS23505 (69749) | 69749..70969 | - | 1221 | WP_000040078.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| A7A16_RS23510 (72223) | 72223..73170 | + | 948 | WP_049032451.1 | Outer membrane protease OmpP | VF |
| A7A16_RS23515 (73263) | 73263..74762 | + | 1500 | WP_049032449.1 | alpha/beta hydrolase | - |
| A7A16_RS23520 (75259) | 75259..75393 | + | 135 | Protein_81 | serine/threonine protein kinase | - |
| A7A16_RS23525 (75514) | 75514..76254 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| A7A16_RS23530 (76539) | 76539..77516 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| A7A16_RS23535 (78356) | 78356..78997 | - | 642 | WP_000990665.1 | hypothetical protein | - |
| A7A16_RS23540 (81113) | 81113..81403 | + | 291 | WP_000538310.1 | hypothetical protein | - |
| A7A16_RS23545 (81393) | 81393..82292 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| A7A16_RS23550 (82342) | 82342..84567 | - | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| A7A16_RS23555 (84569) | 84569..85657 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| A7A16_RS23560 (86237) | 86237..86455 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| A7A16_RS23565 (86457) | 86457..86762 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| A7A16_RS23570 (86763) | 86763..87569 | + | 807 | WP_000016982.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|