MGE detailed information
MGE type: Prophage MGE length: 50240 bp
Accession: NZ_CP076264 Location: 1739460..1789699 Organism: Escherichia coli strain NADC1036 Replicon: chromosome
Accession: NZ_CP076264 Location: 1739460..1789699 Organism: Escherichia coli strain NADC1036 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A17_RS08415 (1735973) | 1735973..1736719 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| A7A17_RS08420 (1736808) | 1736808..1737494 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| A7A17_RS08425 (1737672) | 1737672..1737875 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| A7A17_RS08430 (1737911) | 1737911..1739371 | - | 1461 | WP_000527759.1 | mannitol dehydrogenase family protein | - |
| A7A17_RS08435 (1739460) | 1739460..1740743 | - | 1284 | Protein_1655 | MHS family MFS transporter YdfJ | - |
| A7A17_RS08440 (1741347) | 1741347..1741460 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| A7A17_RS08445 (1741529) | 1741529..1741762 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| A7A17_RS08450 (1742079) | 1742079..1742669 | + | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| A7A17_RS08455 (1742767) | 1742767..1743342 | - | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| A7A17_RS08460 (1743342) | 1743342..1746302 | - | 2961 | WP_072320446.1 | phage tail protein | - |
| A7A17_RS08465 (1746367) | 1746367..1746966 | - | 600 | WP_040075703.1 | Outer membrane protein X | VF |
| A7A17_RS08470 (1747034) | 1747034..1750513 | - | 3480 | WP_061359409.1 | host specificity protein J | - |
| A7A17_RS08475 (1750574) | 1750574..1751146 | - | 573 | WP_000847666.1 | tail assembly protein | - |
| A7A17_RS08480 (1751143) | 1751143..1751886 | - | 744 | WP_000194780.1 | C40 family peptidase | - |
| A7A17_RS08485 (1751892) | 1751892..1752590 | - | 699 | WP_001152624.1 | phage minor tail protein L | - |
| A7A17_RS08490 (1752590) | 1752590..1752919 | - | 330 | WP_000847331.1 | phage tail protein | - |
| A7A17_RS08495 (1752916) | 1752916..1755495 | - | 2580 | WP_042972482.1 | phage tail tape measure protein | - |
| A7A17_RS08500 (1755488) | 1755488..1755922 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| A7A17_RS08505 (1755904) | 1755904..1756326 | - | 423 | WP_000479135.1 | phage minor tail protein G | - |
| A7A17_RS08510 (1756342) | 1756342..1757082 | - | 741 | WP_001543784.1 | phage tail protein | - |
| A7A17_RS08515 (1757090) | 1757090..1757485 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| A7A17_RS08520 (1757482) | 1757482..1758060 | - | 579 | WP_032161819.1 | phage tail protein | - |
| A7A17_RS08525 (1758072) | 1758072..1758425 | - | 354 | WP_000785282.1 | head-tail joining protein | - |
| A7A17_RS08530 (1758437) | 1758437..1758832 | - | 396 | WP_000158875.1 | DNA-packaging protein FI | - |
| A7A17_RS08535 (1758874) | 1758874..1759899 | - | 1026 | WP_000063254.1 | major capsid protein | - |
| A7A17_RS08540 (1759955) | 1759955..1760287 | - | 333 | WP_001358225.1 | head decoration protein | - |
| A7A17_RS08545 (1760297) | 1760297..1761616 | - | 1320 | WP_000123317.1 | S49 family peptidase | - |
| A7A17_RS08550 (1761597) | 1761597..1763198 | - | 1602 | WP_001345555.1 | phage portal protein | - |
| A7A17_RS08555 (1763195) | 1763195..1763401 | - | 207 | WP_000198149.1 | gpW family protein | - |
| A7A17_RS08560 (1763398) | 1763398..1765323 | - | 1926 | WP_222692282.1 | phage terminase large subunit family protein | - |
| A7A17_RS08565 (1765298) | 1765298..1765843 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| A7A17_RS08570 (1766232) | 1766232..1766465 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| A7A17_RS08575 (1766523) | 1766523..1766933 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| A7A17_RS08580 (1767085) | 1767085..1767258 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| A7A17_RS08585 (1767430) | 1767430..1767585 | - | 156 | WP_001309517.1 | protein YnfN | - |
| A7A17_RS08590 (1767665) | 1767665..1767730 | - | 66 | WP_122134696.1 | small protein YnfR | - |
| A7A17_RS08595 (1767733) | 1767733..1767921 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| A7A17_RS08600 (1767932) | 1767932..1768144 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| A7A17_RS08605 (1768508) | 1768508..1769005 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| A7A17_RS08610 (1769002) | 1769002..1769535 | - | 534 | WP_001092971.1 | lysozyme | - |
| A7A17_RS08615 (1769532) | 1769532..1769843 | - | 312 | WP_000189915.1 | YdfR family protein | - |
| A7A17_RS08620 (1769848) | 1769848..1770063 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| A7A17_RS08625 (1770283) | 1770283..1770453 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| A7A17_RS08630 (1770817) | 1770817..1771032 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| A7A17_RS08635 (1771333) | 1771333..1771545 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| A7A17_RS08640 (1771600) | 1771600..1771689 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| A7A17_RS08645 (1771967) | 1771967..1772719 | - | 753 | WP_001047135.1 | antitermination protein | - |
| A7A17_RS08650 (1772733) | 1772733..1773782 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| A7A17_RS08655 (1773784) | 1773784..1774062 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| A7A17_RS08660 (1774129) | 1774129..1774380 | - | 252 | WP_000980994.1 | protein Rem | - |
| A7A17_RS08665 (1774597) | 1774597..1774752 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| A7A17_RS08670 (1774824) | 1774824..1775111 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| A7A17_RS08675 (1775111) | 1775111..1775350 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| A7A17_RS08680 (1775375) | 1775375..1775680 | + | 306 | WP_001326990.1 | protein YdfV | - |
| A7A17_RS08685 (1775883) | 1775883..1776215 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| A7A17_RS08690 (1776652) | 1776652..1776801 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| A7A17_RS08695 (1776922) | 1776922..1777584 | - | 663 | Protein_1707 | ISNCY family transposase ISCARN112 | Transposase |
| A7A17_RS08700 (1777622) | 1777622..1777993 | - | 372 | WP_244570023.1 | ISNCY family transposase ISRel10 | Transposase |
| A7A17_RS08705 (1778762) | 1778762..1779049 | - | 288 | Protein_1709 | hypothetical protein | - |
| A7A17_RS08710 (1779527) | 1779527..1780016 | - | 490 | Protein_1710 | class I SAM-dependent methyltransferase | - |
| A7A17_RS08715 (1780013) | 1780013..1780435 | - | 423 | WP_032201175.1 | DUF977 family protein | - |
| A7A17_RS08720 (1780476) | 1780476..1781441 | - | 966 | WP_000054509.1 | hypothetical protein | - |
| A7A17_RS08725 (1781422) | 1781422..1781943 | - | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| A7A17_RS08730 (1781927) | 1781927..1782154 | - | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| A7A17_RS08735 (1782235) | 1782235..1782642 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| A7A17_RS08740 (1782811) | 1782811..1782966 | + | 156 | WP_000379578.1 | DUF1391 family protein | - |
| A7A17_RS08745 (1782968) | 1782968..1783096 | + | 129 | WP_000344964.1 | protein YdfB | - |
| A7A17_RS08750 (1783126) | 1783126..1783344 | + | 219 | WP_001171925.1 | protein YdfC | - |
| A7A17_RS08755 (1783912) | 1783912..1784100 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| A7A17_RS08760 (1784097) | 1784097..1784288 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| A7A17_RS08765 (1784382) | 1784382..1786853 | + | 2472 | WP_021511903.1 | exonuclease | - |
| A7A17_RS08770 (1786926) | 1786926..1787177 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| A7A17_RS08775 (1787212) | 1787212..1788492 | + | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| A7A17_RS08780 (1788680) | 1788680..1789699 | - | 1020 | WP_000836072.1 | Zn-dependent oxidoreductase | - |
| A7A17_RS08785 (1789711) | 1789711..1790925 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| A7A17_RS08790 (1791131) | 1791131..1791457 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| A7A17_RS08795 (1791592) | 1791592..1791933 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| A7A17_RS08800 (1791968) | 1791968..1792528 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| A7A17_RS08805 (1792531) | 1792531..1793241 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| A7A17_RS08810 (1793349) | 1793349..1793654 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|