MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP076262 Location: 4716979..4726330 Organism: Escherichia coli strain 0-4 Replicon: chromosome
Accession: NZ_CP076262 Location: 4716979..4726330 Organism: Escherichia coli strain 0-4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A18_RS23085 (4713710) | 4713710..4714429 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| A7A18_RS23090 (4714426) | 4714426..4716057 | - | 1632 | WP_001216460.1 | sensor histidine kinase | - |
| A7A18_RS23095 (4716238) | 4716238..4716468 | + | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| A7A18_RS23100 (4716480) | 4716480..4716752 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| A7A18_RS23105 (4716979) | 4716979..4717275 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| A7A18_RS23110 (4717303) | 4717303..4717476 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| A7A18_RS23115 (4717595) | 4717595..4719112 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| A7A18_RS23120 (4719349) | 4719349..4720806 | - | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| A7A18_RS23125 (4720865) | 4720865..4723012 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| A7A18_RS23130 (4723092) | 4723092..4724426 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| A7A18_RS23135 (4724792) | 4724792..4726330 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| A7A18_RS23145 (4727129) | 4727129..4727704 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| A7A18_RS23150 (4727741) | 4727741..4729438 | - | 1698 | WP_000068907.1 | protein-disulfide reductase DsbD | - |
| A7A18_RS23155 (4729414) | 4729414..4729752 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| A7A18_RS23160 (4729868) | 4729868..4731169 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |