MGE detailed information
MGE type: Prophage MGE length: 48712 bp
Accession: NZ_CP076262 Location: 1790588..1839299 Organism: Escherichia coli strain 0-4 Replicon: chromosome
Accession: NZ_CP076262 Location: 1790588..1839299 Organism: Escherichia coli strain 0-4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A18_RS08615 (1787101) | 1787101..1787847 | + | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| A7A18_RS08620 (1787936) | 1787936..1788622 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| A7A18_RS08625 (1788800) | 1788800..1789003 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| A7A18_RS08630 (1789039) | 1789039..1790499 | - | 1461 | WP_000527751.1 | mannitol dehydrogenase family protein | - |
| A7A18_RS08635 (1790588) | 1790588..1791871 | - | 1284 | Protein_1693 | MHS family MFS transporter YdfJ | - |
| A7A18_RS08640 (1792473) | 1792473..1792586 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| A7A18_RS08645 (1792655) | 1792655..1792888 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| A7A18_RS08650 (1793205) | 1793205..1793795 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| A7A18_RS08655 (1793893) | 1793893..1794468 | - | 576 | WP_096974698.1 | tail fiber assembly protein | - |
| A7A18_RS08660 (1794468) | 1794468..1797866 | - | 3399 | WP_096979011.1 | prophage tail fiber N-terminal domain-containing protein | - |
| A7A18_RS08665 (1797931) | 1797931..1798530 | - | 600 | WP_096129297.1 | L-cystine uptake protein TcyP | VF |
| A7A18_RS08670 (1798598) | 1798598..1801993 | - | 3396 | WP_000515501.1 | host specificity protein J | - |
| A7A18_RS08675 (1802054) | 1802054..1802701 | - | 648 | WP_000741589.1 | tail assembly protein | - |
| A7A18_RS08680 (1802599) | 1802599..1803342 | - | 744 | WP_000140707.1 | C40 family peptidase | - |
| A7A18_RS08685 (1803347) | 1803347..1804045 | - | 699 | WP_001152371.1 | phage minor tail protein L | - |
| A7A18_RS08690 (1804055) | 1804055..1804384 | - | 330 | WP_000447251.1 | phage tail protein | - |
| A7A18_RS08695 (1804384) | 1804384..1807449 | - | 3066 | WP_087651122.1 | phage tail tape measure protein | - |
| A7A18_RS08700 (1807421) | 1807421..1807750 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| A7A18_RS08705 (1807759) | 1807759..1808145 | - | 387 | WP_001297778.1 | phage minor tail protein G | - |
| A7A18_RS08710 (1808206) | 1808206..1808949 | - | 744 | WP_257119664.1 | phage tail protein | - |
| A7A18_RS08715 (1808960) | 1808960..1809361 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| A7A18_RS08720 (1809358) | 1809358..1809936 | - | 579 | WP_087651123.1 | phage tail protein | - |
| A7A18_RS08725 (1809948) | 1809948..1810223 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| A7A18_RS08730 (1810216) | 1810216..1810539 | - | 324 | WP_001097041.1 | DUF2190 family protein | - |
| A7A18_RS08735 (1810626) | 1810626..1812653 | - | 2028 | WP_087651125.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| A7A18_RS08740 (1812598) | 1812598..1814178 | - | 1581 | WP_087651126.1 | phage portal protein | - |
| A7A18_RS08745 (1814106) | 1814106..1814318 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| A7A18_RS08750 (1814315) | 1814315..1816417 | - | 2103 | WP_033802810.1 | phage terminase large subunit family protein | - |
| A7A18_RS08755 (1816417) | 1816417..1816911 | - | 495 | WP_000373425.1 | DUF1441 family protein | - |
| A7A18_RS08760 (1817482) | 1817482..1817688 | - | 207 | WP_001031431.1 | hypothetical protein | - |
| A7A18_RS08765 (1817989) | 1817989..1818399 | + | 411 | WP_000035574.1 | DUF1398 domain-containing protein | - |
| A7A18_RS08770 (1818551) | 1818551..1818724 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| A7A18_RS08775 (1818896) | 1818896..1819051 | - | 156 | WP_001309517.1 | protein YnfN | - |
| A7A18_RS08780 (1819131) | 1819131..1819196 | - | 66 | WP_122134696.1 | small protein YnfR | - |
| A7A18_RS08785 (1819199) | 1819199..1819387 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| A7A18_RS08790 (1819398) | 1819398..1819610 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| A7A18_RS08795 (1819974) | 1819974..1820471 | - | 498 | WP_001071766.1 | DUF2514 domain-containing protein | - |
| A7A18_RS08800 (1820468) | 1820468..1821001 | - | 534 | WP_001092971.1 | lysozyme | - |
| A7A18_RS08805 (1820998) | 1820998..1821309 | - | 312 | WP_000189915.1 | YdfR family protein | - |
| A7A18_RS08810 (1821314) | 1821314..1821529 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| A7A18_RS08815 (1821749) | 1821749..1821919 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| A7A18_RS08820 (1822283) | 1822283..1822498 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| A7A18_RS08825 (1822799) | 1822799..1823011 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| A7A18_RS08830 (1823066) | 1823066..1823155 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| A7A18_RS08835 (1823433) | 1823433..1824185 | - | 753 | WP_001047135.1 | antitermination protein | - |
| A7A18_RS08840 (1824199) | 1824199..1825248 | - | 1050 | WP_063087587.1 | DUF968 domain-containing protein | - |
| A7A18_RS08845 (1825250) | 1825250..1825528 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| A7A18_RS08850 (1825595) | 1825595..1825846 | - | 252 | WP_000980994.1 | protein Rem | - |
| A7A18_RS08855 (1826063) | 1826063..1826218 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| A7A18_RS08860 (1826291) | 1826291..1826578 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| A7A18_RS08865 (1826578) | 1826578..1826817 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| A7A18_RS08870 (1826842) | 1826842..1827147 | + | 306 | WP_001326990.1 | protein YdfV | - |
| A7A18_RS08875 (1827350) | 1827350..1827682 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| A7A18_RS08880 (1828119) | 1828119..1828268 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| A7A18_RS08885 (1828341) | 1828341..1829438 | - | 1098 | Protein_1743 | ISNCY family transposase ISCARN112 | Transposase |
| A7A18_RS08890 (1829493) | 1829493..1829912 | - | 420 | WP_071666191.1 | DUF977 family protein | - |
| A7A18_RS08895 (1829953) | 1829953..1830918 | - | 966 | WP_000054506.1 | hypothetical protein | - |
| A7A18_RS08900 (1830899) | 1830899..1831420 | - | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| A7A18_RS08905 (1831404) | 1831404..1831634 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| A7A18_RS08910 (1831718) | 1831718..1832125 | + | 408 | WP_063087585.1 | DNA-binding transcriptional dual regulator DicA | - |
| A7A18_RS08915 (1832292) | 1832292..1832447 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| A7A18_RS08920 (1832449) | 1832449..1833024 | + | 576 | WP_000344953.1 | hypothetical protein | - |
| A7A18_RS08925 (1833512) | 1833512..1833700 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| A7A18_RS08930 (1833697) | 1833697..1833888 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| A7A18_RS08935 (1833982) | 1833982..1836453 | + | 2472 | WP_000048324.1 | exonuclease | - |
| A7A18_RS08940 (1836526) | 1836526..1836777 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| A7A18_RS08945 (1836812) | 1836812..1838092 | + | 1281 | WP_000877001.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| A7A18_RS08950 (1838280) | 1838280..1839299 | - | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| A7A18_RS08955 (1839311) | 1839311..1840525 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| A7A18_RS08960 (1840731) | 1840731..1841057 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| A7A18_RS08965 (1841192) | 1841192..1841533 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| A7A18_RS08970 (1841568) | 1841568..1842128 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| A7A18_RS08975 (1842131) | 1842131..1842841 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| A7A18_RS08980 (1842949) | 1842949..1843254 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|