MGE detailed information
MGE type: Prophage MGE length: 50672 bp
Accession: NZ_CP076262 Location: 1504346..1555017 Organism: Escherichia coli strain 0-4 Replicon: chromosome
Accession: NZ_CP076262 Location: 1504346..1555017 Organism: Escherichia coli strain 0-4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A18_RS07255 (1500335) | 1500335..1500382 | + | 48 | WP_211180494.1 | protein YnaN | - |
| A7A18_RS07260 (1500396) | 1500396..1501379 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| A7A18_RS07265 (1501857) | 1501857..1503230 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| A7A18_RS07270 (1503359) | 1503359..1504294 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| A7A18_RS07275 (1504346) | 1504346..1505581 | - | 1236 | WP_000040843.1 | 1-phosphatidylinositol phosphodiesterase ; Integrase | Integrase |
| A7A18_RS07280 (1505583) | 1505583..1505798 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1505902) | 1505902..1506080 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1505902) | 1505902..1506080 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1505902) | 1505902..1506080 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1505902) | 1505902..1506080 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| A7A18_RS07285 (1505898) | 1505898..1506086 | - | 189 | WP_001406908.1 | DUF1187 family protein | - |
| A7A18_RS07290 (1506079) | 1506079..1506273 | - | 195 | WP_001406909.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| A7A18_RS07295 (1506336) | 1506336..1507388 | - | 1053 | WP_001406910.1 | RecT family recombinase | - |
| A7A18_RS07300 (1507400) | 1507400..1510522 | - | 3123 | WP_096974680.1 | exodeoxyribonuclease VIII | - |
| A7A18_RS07305 (1510624) | 1510624..1510899 | - | 276 | WP_032218014.1 | hypothetical protein | - |
| A7A18_RS07310 (1510974) | 1510974..1511150 | - | 177 | WP_032218016.1 | YdaE family protein | - |
| A7A18_RS07315 (1511144) | 1511144..1511365 | - | 222 | WP_000560226.1 | killing protein KilR | - |
| A7A18_RS07320 (1511804) | 1511804..1512293 | + | 490 | Protein_1430 | superinfection exclusion B family protein | - |
| A7A18_RS07325 (1512290) | 1512290..1512445 | - | 156 | WP_052318727.1 | DUF1391 family protein | - |
| A7A18_RS07330 (1512577) | 1512577..1512855 | - | 279 | WP_047671515.1 | hypothetical protein | - |
| A7A18_RS07335 (1513017) | 1513017..1513424 | - | 408 | WP_047662223.1 | helix-turn-helix domain-containing protein | - |
| A7A18_RS07340 (1513504) | 1513504..1513731 | + | 228 | WP_047662222.1 | Cro/CI family transcriptional regulator | - |
| A7A18_RS07345 (1513715) | 1513715..1514137 | + | 423 | WP_089537809.1 | toxin YdaT family protein | - |
| A7A18_RS07350 (1514201) | 1514201..1515439 | + | 1239 | WP_226397322.1 | DUF1376 domain-containing protein | - |
| A7A18_RS07355 (1515432) | 1515432..1515893 | + | 462 | WP_230989303.1 | replication protein P | - |
| A7A18_RS07360 (1515928) | 1515928..1516653 | + | 726 | WP_096974679.1 | DUF1627 domain-containing protein | - |
| A7A18_RS07365 (1516670) | 1516670..1517092 | + | 423 | WP_096974678.1 | DUF977 family protein | - |
| A7A18_RS07370 (1517150) | 1517150..1517506 | + | 357 | WP_096974677.1 | hypothetical protein | - |
| A7A18_RS07375 (1517636) | 1517636..1517809 | + | 174 | WP_157915273.1 | hypothetical protein | - |
| A7A18_RS07380 (1517839) | 1517839..1518057 | + | 219 | WP_257119662.1 | DUF4014 family protein | - |
| A7A18_RS07385 (1518059) | 1518059..1518424 | + | 366 | WP_001229296.1 | HNH endonuclease signature motif containing protein | - |
| A7A18_RS07390 (1518421) | 1518421..1518765 | + | 345 | WP_000206826.1 | hypothetical protein | - |
| A7A18_RS07395 (1518962) | 1518962..1519258 | + | 297 | WP_235165768.1 | hypothetical protein | - |
| A7A18_RS07400 (1519565) | 1519565..1519747 | + | 183 | WP_249545314.1 | hypothetical protein | - |
| A7A18_RS07405 (1519798) | 1519798..1520495 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| A7A18_RS07410 (1520651) | 1520651..1520968 | + | 318 | WP_249545310.1 | hypothetical protein | - |
| A7A18_RS07415 (1521229) | 1521229..1521384 | + | 156 | WP_001406927.1 | type I toxin-antitoxin system toxin HokD | - |
| A7A18_RS07420 (1521629) | 1521629..1521889 | + | 261 | WP_096974725.1 | hypothetical protein | - |
| A7A18_RS07425 (1521957) | 1521957..1522556 | + | 600 | WP_096974724.1 | DUF1367 family protein | - |
| A7A18_RS07430 (1522556) | 1522556..1522846 | + | 291 | WP_001406930.1 | DUF1364 domain-containing protein | - |
| A7A18_RS07435 (1522843) | 1522843..1523379 | + | 537 | WP_032218046.1 | DUF1133 family protein | - |
| A7A18_RS07440 (1523833) | 1523833..1524375 | + | 543 | WP_249545309.1 | subtilase family AB5 toxin binding subunit | - |
| A7A18_RS07445 (1524393) | 1524393..1525136 | + | 744 | WP_089537915.1 | Quinolone resistance protein NorB | VF |
| A7A18_RS07450 (1525630) | 1525630..1526022 | + | 393 | WP_032218714.1 | putative holin | - |
| A7A18_RS07455 (1526012) | 1526012..1526290 | + | 279 | WP_032218047.1 | phage holin family protein | - |
| A7A18_RS07460 (1526292) | 1526292..1526837 | + | 546 | WP_032218049.1 | putative peptidoglycan-binding domain-containing protein | - |
| A7A18_RS07465 (1526913) | 1526913..1527692 | + | 780 | WP_032218051.1 | Phosphate-import permease protein PhnE | VF |
| A7A18_RS07470 (1527682) | 1527682..1528050 | + | 369 | WP_032218056.1 | enterotoxin | - |
| A7A18_RS07475 (1528296) | 1528296..1528505 | + | 210 | Protein_1461 | hypothetical protein | - |
| A7A18_RS07480 (1528628) | 1528628..1528741 | + | 114 | WP_032218717.1 | hypothetical protein | - |
| A7A18_RS07485 (1529040) | 1529040..1529252 | - | 213 | WP_071702711.1 | KTSC domain-containing protein | - |
| A7A18_RS07490 (1529228) | 1529228..1529407 | + | 180 | WP_032218059.1 | hypothetical protein | - |
| A7A18_RS07495 (1529526) | 1529526..1530314 | + | 789 | WP_032218061.1 | ParB/Srx family N-terminal domain-containing protein | - |
| A7A18_RS07500 (1530307) | 1530307..1531239 | + | 933 | WP_001406941.1 | hypothetical protein | - |
| A7A18_RS07505 (1531217) | 1531217..1531426 | + | 210 | WP_000126790.1 | hypothetical protein | - |
| A7A18_RS07510 (1531430) | 1531430..1532524 | + | 1095 | WP_096974722.1 | terminase small subunit | - |
| A7A18_RS07515 (1532505) | 1532505..1533806 | + | 1302 | WP_001406943.1 | terminase family protein | - |
| A7A18_RS07520 (1533809) | 1533809..1535215 | + | 1407 | WP_001406944.1 | DUF4055 domain-containing protein | - |
| A7A18_RS07525 (1535199) | 1535199..1536311 | + | 1113 | WP_001406945.1 | phage minor head protein | - |
| A7A18_RS07530 (1536415) | 1536415..1537179 | + | 765 | WP_032218069.1 | hypothetical protein | - |
| A7A18_RS07535 (1537279) | 1537279..1538418 | + | 1140 | WP_001406946.1 | P22 phage major capsid protein family protein | - |
| A7A18_RS07540 (1538462) | 1538462..1538686 | + | 225 | WP_001406947.1 | hypothetical protein | - |
| A7A18_RS07545 (1538690) | 1538690..1539085 | + | 396 | WP_001406948.1 | hypothetical protein | - |
| A7A18_RS07550 (1539085) | 1539085..1539468 | + | 384 | WP_001406949.1 | hypothetical protein | - |
| A7A18_RS07555 (1539469) | 1539469..1539849 | + | 381 | WP_001406950.1 | hypothetical protein | - |
| A7A18_RS07560 (1539846) | 1539846..1540238 | + | 393 | WP_047662219.1 | phage tail terminator-like protein | - |
| A7A18_RS07565 (1540265) | 1540265..1541227 | + | 963 | WP_001406952.1 | phage tail tube protein | - |
| A7A18_RS07570 (1541376) | 1541376..1541735 | + | 360 | WP_122985745.1 | hypothetical protein | - |
| A7A18_RS07575 (1542222) | 1542222..1542758 | + | 537 | WP_001406955.1 | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase | VF |
| A7A18_RS07580 (1542828) | 1542828..1546061 | + | 3234 | WP_096974721.1 | phage tail tape measure protein | - |
| A7A18_RS07585 (1546054) | 1546054..1546392 | + | 339 | WP_047662217.1 | phage tail protein | - |
| A7A18_RS07590 (1546392) | 1546392..1547090 | + | 699 | WP_089537788.1 | phage minor tail protein L | - |
| A7A18_RS07595 (1547095) | 1547095..1547838 | + | 744 | Protein_1485 | C40 family peptidase | - |
| A7A18_RS07600 (1547775) | 1547775..1548383 | + | 609 | WP_257119663.1 | tail assembly protein | - |
| A7A18_RS07605 (1548444) | 1548444..1551839 | + | 3396 | WP_257117599.1 | host specificity protein J | - |
| A7A18_RS07610 (1551898) | 1551898..1553433 | + | 1536 | Protein_1488 | prophage tail fiber N-terminal domain-containing protein | - |
| A7A18_RS07615 (1554487) | 1554487..1555017 | + | 531 | WP_001164143.1 | tail fiber assembly protein | - |
| A7A18_RS07620 (1555587) | 1555587..1556021 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| A7A18_RS07625 (1556162) | 1556162..1557295 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|