MGE detailed information
MGE type: Conjugative plasmid MGE length: 89049 bp
Accession: NZ_CP076260 Location: 1..89049 Organism: Escherichia coli strain WY517-2 Replicon: plasmid pWY517IncF
Accession: NZ_CP076260 Location: 1..89049 Organism: Escherichia coli strain WY517-2 Replicon: plasmid pWY517IncF
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A20_RS23225 (736) | 736..6006 | - | 5271 | WP_097473863.1 | Multifunctional conjugation protein TraI | Relaxase |
| A7A20_RS23230 (6088) | 6088..6315 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| A7A20_RS23235 (6315) | 6315..6713 | + | 399 | WP_000911315.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A7A20_RS23240 (6722) | 6722..8929 | - | 2208 | WP_069901214.1 | type IV conjugative transfer system coupling protein TraD | - |
| A7A20_RS23245 (9182) | 9182..9892 | - | 711 | WP_042032882.1 | conjugal transfer complement resistance protein TraT | - |
| A7A20_RS23250 (9938) | 9938..10459 | - | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| A7A20_RS23255 (10492) | 10492..13308 | - | 2817 | WP_001007052.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| A7A20_RS23260 (13305) | 13305..14678 | - | 1374 | WP_170816519.1 | conjugal transfer pilus assembly protein TraH | - |
| A7A20_RS23265 (14678) | 14678..15058 | - | 381 | WP_024186094.1 | F-type conjugal transfer protein TrbF | - |
| A7A20_RS23270 (15045) | 15045..15386 | - | 342 | WP_072048572.1 | P-type conjugative transfer protein TrbJ | - |
| A7A20_RS23275 (15316) | 15316..15861 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A7A20_RS23280 (15848) | 15848..16132 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A7A20_RS23285 (16213) | 16213..16449 | + | 237 | WP_001352846.1 | hypothetical protein | - |
| A7A20_RS23290 (16529) | 16529..16876 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| A7A20_RS23295 (16892) | 16892..17635 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A7A20_RS23300 (17628) | 17628..17885 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| A7A20_RS23305 (17912) | 17912..19720 | - | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A7A20_RS23310 (19717) | 19717..20355 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A7A20_RS23315 (20364) | 20364..21356 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| A7A20_RS23320 (21353) | 21353..21985 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| A7A20_RS23325 (21982) | 21982..22368 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| A7A20_RS23330 (22365) | 22365..24992 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| A7A20_RS23335 (25152) | 25152..25373 | - | 222 | WP_163406566.1 | conjugal transfer protein TraR | - |
| A7A20_RS23340 (25508) | 25508..26023 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A7A20_RS23345 (26020) | 26020..26271 | - | 252 | WP_001038349.1 | conjugal transfer protein TrbG | - |
| A7A20_RS23350 (26283) | 26283..26480 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| A7A20_RS23355 (26467) | 26467..27056 | - | 590 | Protein_27 | conjugal transfer protein TraP | - |
| A7A20_RS23360 (27046) | 27046..28473 | - | 1428 | WP_000146676.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| A7A20_RS23365 (28473) | 28473..29201 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| A7A20_RS23370 (29188) | 29188..29754 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| A7A20_RS23375 (29776) | 29776..30087 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| A7A20_RS23380 (30102) | 30102..30467 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| A7A20_RS23385 (30510) | 30510..30725 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| A7A20_RS23390 (30861) | 30861..31508 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| A7A20_RS23395 (31700) | 31700..32083 | - | 384 | WP_001063020.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| A7A20_RS23400 (32435) | 32435..33025 | + | 591 | WP_001375132.1 | hypothetical protein | VF |
| A7A20_RS23405 (33321) | 33321..34142 | - | 822 | Protein_37 | DUF945 domain-containing protein | - |
| A7A20_RS23410 (34261) | 34261..34547 | - | 287 | Protein_38 | hypothetical protein | - |
| A7A20_RS23415 (34572) | 34572..34778 | - | 207 | WP_040101106.1 | hypothetical protein | - |
| A7A20_RS23420 (34848) | 34848..35145 | + | 298 | Protein_40 | hypothetical protein | - |
| A7A20_RS23425 (35446) | 35446..35571 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| A7A20_RS23430 (35513) | 35513..35662 | - | 150 | Protein_42 | DUF5431 family protein | - |
| - (35669) | 35669..35867 | - | 199 | NuclAT_0 | - | - |
| - (35669) | 35669..35867 | - | 199 | NuclAT_0 | - | - |
| - (35669) | 35669..35867 | - | 199 | NuclAT_0 | - | - |
| - (35669) | 35669..35867 | - | 199 | NuclAT_0 | - | - |
| A7A20_RS23435 (35836) | 35836..36598 | - | 763 | Protein_43 | plasmid SOS inhibition protein A | - |
| A7A20_RS23440 (36595) | 36595..37029 | - | 435 | WP_000845926.1 | conjugation system SOS inhibitor PsiB | - |
| A7A20_RS23445 (37084) | 37084..39042 | - | 1959 | WP_032219150.1 | ParB/RepB/Spo0J family partition protein | - |
| A7A20_RS23450 (39106) | 39106..39339 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| A7A20_RS23455 (39402) | 39402..39941 | - | 540 | WP_032219151.1 | single-stranded DNA-binding protein | - |
| A7A20_RS23460 (40744) | 40744..40935 | - | 192 | WP_001027497.1 | hypothetical protein | - |
| A7A20_RS23465 (40935) | 40935..41354 | - | 420 | WP_000271711.1 | DUF1380 family protein | - |
| A7A20_RS23470 (41401) | 41401..41826 | - | 426 | WP_001198954.1 | antirestriction protein | - |
| A7A20_RS23475 (42243) | 42243..43013 | - | 771 | WP_205744322.1 | hypothetical protein | - |
| A7A20_RS23480 (43058) | 43058..43525 | - | 468 | WP_225567118.1 | DUF1380 family protein | - |
| A7A20_RS23485 (43506) | 43506..43727 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| A7A20_RS23490 (43728) | 43728..44411 | - | 684 | WP_032219114.1 | DNA methylase | - |
| A7A20_RS23495 (44488) | 44488..44799 | - | 312 | WP_032219116.1 | hypothetical protein | - |
| A7A20_RS23500 (44796) | 44796..45698 | - | 903 | WP_124062600.1 | DUF1281 domain-containing protein | - |
| A7A20_RS23505 (46116) | 46116..46364 | + | 249 | WP_019842136.1 | DinI-like family protein | - |
| A7A20_RS23510 (46361) | 46361..46798 | + | 438 | WP_032219119.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A7A20_RS23515 (46798) | 46798..48068 | + | 1271 | Protein_59 | translesion error-prone DNA polymerase V subunit UmuC | - |
| A7A20_RS23520 (48073) | 48073..48465 | - | 393 | WP_000340833.1 | plasmid partitioning/stability family protein | - |
| A7A20_RS23525 (48470) | 48470..49441 | - | 972 | WP_001103694.1 | plasmid segregation protein ParM | - |
| A7A20_RS23530 (49670) | 49670..50314 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| A7A20_RS23535 (50308) | 50308..50583 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| A7A20_RS23540 (50721) | 50721..51530 | - | 810 | WP_032219120.1 | site-specific integrase | - |
| A7A20_RS23545 (51531) | 51531..51836 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A7A20_RS23550 (51838) | 51838..52056 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A7A20_RS23555 (52610) | 52610..55216 | - | 2607 | WP_257120090.1 | hypothetical protein | - |
| A7A20_RS23560 (55335) | 55335..56563 | + | 1229 | WP_102384962.1 | IS3 family transposase IS2 | Transposase |
| A7A20_RS23565 (56574) | 56574..57077 | - | 504 | Protein_69 | hypothetical protein | - |
| A7A20_RS23570 (57757) | 57757..58961 | + | 1205 | Protein_70 | ISL3 family transposase | - |
| A7A20_RS23575 (59829) | 59829..60806 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| A7A20_RS23580 (61091) | 61091..61831 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| A7A20_RS23585 (61952) | 61952..62086 | - | 135 | Protein_73 | serine/threonine protein kinase | - |
| A7A20_RS23590 (62583) | 62583..64082 | - | 1500 | WP_012775847.1 | alpha/beta hydrolase | - |
| A7A20_RS23595 (64175) | 64175..65122 | - | 948 | WP_001407138.1 | Outer membrane protease OmpP | VF |
| A7A20_RS23600 (66533) | 66533..67753 | + | 1221 | WP_257120091.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| A7A20_RS23605 (67746) | 67746..72503 | + | 4758 | WP_158128338.1 | putative autotransporter | VF |
| A7A20_RS23610 (72802) | 72802..73080 | + | 279 | WP_042054335.1 | hypothetical protein | - |
| A7A20_RS23615 (73254) | 73254..73530 | - | 277 | Protein_79 | IS3 family transposase IS1351 | Transposase |
| A7A20_RS23620 (73928) | 73928..74764 | - | 837 | WP_163406570.1 | Right origin-binding protein | VF |
| A7A20_RS23625 (75106) | 75106..76109 | - | 1004 | Protein_81 | IS3 family transposase | - |
| A7A20_RS23630 (76510) | 76510..77524 | + | 1015 | Protein_82 | integrase core domain-containing protein | - |
| A7A20_RS23640 (78327) | 78327..79274 | + | 948 | WP_001253824.1 | DMT family transporter | - |
| A7A20_RS23645 (79712) | 79712..81253 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| A7A20_RS23650 (81268) | 81268..82014 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| A7A20_RS23655 (82201) | 82201..82356 | + | 156 | Protein_86 | IS110 family transposase | - |
| A7A20_RS23660 (82752) | 82752..83003 | - | 252 | WP_001315600.1 | HTH domain-containing protein | - |
| A7A20_RS23665 (84355) | 84355..85377 | - | 1023 | WP_032219133.1 | plasmid replication initiator RepA | - |
| A7A20_RS23670 (85367) | 85367..85894 | - | 528 | WP_257120092.1 | plasmid replication initiator RepA | - |
| A7A20_RS23675 (85887) | 85887..85961 | - | 75 | WP_059340318.1 | RepA leader peptide Tap | - |
| A7A20_RS23680 (86195) | 86195..86450 | - | 256 | Protein_91 | replication regulatory protein RepA | - |
| A7A20_RS23685 (87099) | 87099..87314 | - | 216 | WP_032219135.1 | hypothetical protein | - |
| A7A20_RS23690 (87443) | 87443..88003 | - | 561 | WP_032219136.1 | fertility inhibition protein FinO | - |
| A7A20_RS23695 (88106) | 88106..88966 | - | 861 | WP_032219137.1 | putative protein YcjY | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|