MGE detailed information
MGE type: Genomic_island MGE length: 21210 bp
Accession: NZ_CP076241 Location: 4744003..4765212 Organism: Escherichia coli O157:H7 strain Vac_07.1 Replicon: chromosome
Accession: NZ_CP076241 Location: 4744003..4765212 Organism: Escherichia coli O157:H7 strain Vac_07.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JKN65_RS23930 (4739729) | 4739729..4740271 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| JKN65_RS23935 (4740564) | 4740564..4742714 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| JKN65_RS23940 (4742764) | 4742764..4742967 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| JKN65_RS23945 (4742978) | 4742978..4743934 | + | 957 | WP_001297640.1 | GTPase | - |
| JKN65_RS23950 (4744003) | 4744003..4745361 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| JKN65_RS27650 (4745370) | 4745370..4745654 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| JKN65_RS23955 (4745932) | 4745932..4748364 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| JKN65_RS23960 (4748431) | 4748431..4749900 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| JKN65_RS23965 (4749900) | 4749900..4751654 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - (4751804) | 4751804..4751880 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (4751804) | 4751804..4751880 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (4751804) | 4751804..4751880 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (4751804) | 4751804..4751880 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (4751804) | 4751804..4751880 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4751804) | 4751804..4751880 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4751804) | 4751804..4751880 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4751804) | 4751804..4751880 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| JKN65_RS23970 (4751875) | 4751875..4752216 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| JKN65_RS23975 (4752263) | 4752263..4753426 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| JKN65_RS23980 (4753474) | 4753474..4754355 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| JKN65_RS23985 (4754498) | 4754498..4754650 | - | 153 | WP_001418365.1 | hypothetical protein | - |
| JKN65_RS23990 (4754793) | 4754793..4756205 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| JKN65_RS23995 (4756565) | 4756565..4757405 | - | 841 | Protein_4697 | hypothetical protein | VF |
| JKN65_RS24000 (4757872) | 4757872..4759104 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| JKN65_RS24005 (4759145) | 4759145..4760416 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| JKN65_RS24010 (4760532) | 4760532..4761683 | + | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| JKN65_RS24015 (4761693) | 4761693..4762460 | + | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| JKN65_RS24020 (4762457) | 4762457..4762723 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| JKN65_RS24025 (4763035) | 4763035..4765212 | + | 2178 | WP_000535057.1 | hypothetical protein | VF |
| JKN65_RS24030 (4765478) | 4765478..4766320 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| JKN65_RS24035 (4766388) | 4766388..4767566 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |