MGE detailed information
MGE type: Conjugative plasmid MGE length: 114223 bp
Accession: NZ_CP076124 Location: 1..114223 Organism: Escherichia coli strain F11 Replicon: plasmid pF11A
Accession: NZ_CP076124 Location: 1..114223 Organism: Escherichia coli strain F11 Replicon: plasmid pF11A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F11EC_RS24105 (955) | 955..1473 | - | 519 | WP_000115885.1 | hypothetical protein | VF |
| F11EC_RS24110 (1608) | 1608..1856 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| F11EC_RS24115 (1853) | 1853..2290 | + | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| F11EC_RS24120 (2290) | 2290..3560 | + | 1271 | Protein_4 | translesion error-prone DNA polymerase V subunit UmuC | - |
| F11EC_RS24125 (3565) | 3565..3957 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| F11EC_RS24130 (3962) | 3962..4933 | - | 972 | WP_001103694.1 | plasmid segregation protein ParM | - |
| F11EC_RS24135 (5162) | 5162..5806 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| F11EC_RS24140 (5800) | 5800..6075 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| F11EC_RS24145 (6213) | 6213..7022 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| F11EC_RS24150 (7023) | 7023..7328 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| F11EC_RS24155 (7330) | 7330..7548 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| F11EC_RS24160 (9870) | 9870..10511 | + | 642 | WP_000990667.1 | hypothetical protein | - |
| F11EC_RS24165 (11686) | 11686..12663 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| F11EC_RS24170 (12906) | 12906..13646 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| F11EC_RS24175 (13767) | 13767..13955 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| F11EC_RS24180 (14322) | 14322..15491 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| F11EC_RS24185 (15717) | 15717..15892 | - | 176 | Protein_17 | IS3 family transposase | - |
| F11EC_RS24190 (16338) | 16338..16610 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| F11EC_RS24195 (17147) | 17147..17571 | - | 425 | Protein_19 | IS3 family transposase IS2 | Transposase |
| F11EC_RS24200 (17853) | 17853..19823 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| F11EC_RS24205 (19830) | 19830..20621 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| F11EC_RS24210 (20684) | 20684..21292 | - | 609 | Protein_22 | IS66 family transposase ISEc22 | Transposase |
| F11EC_RS24215 (21360) | 21360..22142 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| F11EC_RS24220 (22139) | 22139..23161 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| F11EC_RS24225 (23247) | 23247..24192 | - | 946 | Protein_25 | IS66 family transposase ISEc8 | Transposase |
| F11EC_RS24230 (24241) | 24241..24588 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| F11EC_RS24235 (24585) | 24585..24989 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| F11EC_RS24240 (25069) | 25069..25407 | - | 339 | Protein_28 | IS3 family transposase IS629 | Transposase |
| F11EC_RS24245 (25491) | 25491..26999 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| F11EC_RS24250 (27672) | 27672..28022 | - | 351 | Protein_30 | IS3 family transposase IS629 | Transposase |
| F11EC_RS24255 (28108) | 28108..29607 | + | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| F11EC_RS24260 (29604) | 29604..30359 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| F11EC_RS24265 (30424) | 30424..30827 | - | 404 | Protein_33 | IS3 family transposase IS629 | Transposase |
| F11EC_RS24270 (30853) | 30853..31158 | + | 306 | Protein_34 | IS91 family transposase ISSbo1 | Transposase |
| F11EC_RS24275 (31681) | 31681..32856 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| F11EC_RS24280 (32925) | 32925..35186 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| F11EC_RS24285 (35355) | 35355..36131 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| F11EC_RS24290 (36139) | 36139..37014 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| F11EC_RS24295 (37346) | 37346..38032 | - | 687 | Protein_39 | replication initiation protein | - |
| F11EC_RS24300 (39484) | 39484..39819 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| F11EC_RS24305 (39948) | 39948..40295 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| F11EC_RS24310 (40315) | 40315..40824 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| F11EC_RS24315 (40821) | 40821..41081 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| F11EC_RS24320 (41183) | 41183..41922 | + | 740 | Protein_44 | IS3 family transposase IS629 | Transposase |
| F11EC_RS24325 (42595) | 42595..42909 | + | 315 | Protein_45 | IS5 family transposase ISKpn26 | Transposase |
| F11EC_RS24330 (42910) | 42910..43083 | + | 174 | Protein_46 | IS5 family transposase ISKpn26 | Transposase |
| F11EC_RS24335 (43233) | 43233..43866 | - | 634 | Protein_47 | histidine-type phosphatase | - |
| F11EC_RS24340 (43988) | 43988..44473 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| F11EC_RS24345 (44498) | 44498..44983 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| F11EC_RS24350 (44970) | 44970..45665 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| F11EC_RS24355 (45670) | 45670..46800 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| F11EC_RS24360 (46790) | 46790..48073 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| F11EC_RS24365 (48076) | 48076..49455 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| F11EC_RS24370 (49559) | 49559..50086 | - | 528 | WP_000178050.1 | iron transporter | - |
| F11EC_RS24375 (50127) | 50127..52013 | - | 1887 | WP_001332815.1 | FTR1 family protein | - |
| F11EC_RS24380 (52360) | 52360..53121 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| F11EC_RS24385 (53358) | 53358..53864 | - | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| F11EC_RS24390 (53854) | 53854..54024 | - | 171 | Protein_58 | DsbA family protein | - |
| F11EC_RS24395 (54111) | 54111..54815 | - | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| F11EC_RS24400 (55871) | 55871..56728 | - | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| F11EC_RS24405 (56721) | 56721..56795 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| F11EC_RS24410 (57028) | 57028..57288 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| F11EC_RS24415 (57528) | 57528..58118 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| F11EC_RS24420 (58156) | 58156..58365 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| F11EC_RS24425 (58411) | 58411..58872 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| F11EC_RS24430 (59117) | 59117..59329 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| F11EC_RS24435 (59458) | 59458..60018 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| F11EC_RS24440 (60121) | 60121..60981 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| F11EC_RS24445 (61040) | 61040..61786 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| F11EC_RS24450 (61806) | 61806..67076 | - | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| F11EC_RS24455 (67076) | 67076..69220 | - | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| F11EC_RS24460 (69271) | 69271..70008 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| F11EC_RS24465 (70211) | 70211..70942 | - | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| F11EC_RS24470 (70991) | 70991..71476 | - | 486 | WP_000605869.1 | hypothetical protein | - |
| F11EC_RS24475 (71492) | 71492..74314 | - | 2823 | WP_001007080.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| F11EC_RS24480 (74311) | 74311..75684 | - | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| F11EC_RS24485 (75671) | 75671..76063 | - | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| F11EC_RS24490 (76044) | 76044..76391 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| F11EC_RS24495 (76321) | 76321..76866 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| F11EC_RS24500 (76853) | 76853..77137 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| F11EC_RS24505 (77218) | 77218..77553 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| F11EC_RS24510 (77534) | 77534..77875 | - | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| F11EC_RS24515 (77889) | 77889..78632 | - | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| F11EC_RS24520 (78625) | 78625..78882 | - | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| F11EC_RS24525 (78909) | 78909..80759 | - | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| F11EC_RS24530 (80756) | 80756..81394 | - | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| F11EC_RS24535 (81403) | 81403..81708 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| F11EC_RS24540 (81738) | 81738..82730 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| F11EC_RS24545 (82727) | 82727..83359 | - | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| F11EC_RS24550 (83356) | 83356..83742 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| F11EC_RS24555 (83739) | 83739..86369 | - | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| F11EC_RS24560 (86736) | 86736..86954 | - | 219 | WP_000556746.1 | hypothetical protein | - |
| F11EC_RS24565 (87034) | 87034..87507 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| F11EC_RS24570 (87500) | 87500..87721 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| F11EC_RS24575 (87856) | 87856..88371 | - | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| F11EC_RS24580 (88368) | 88368..88620 | - | 253 | Protein_96 | conjugal transfer protein TrbG | - |
| F11EC_RS24585 (88613) | 88613..88933 | - | 321 | WP_001057274.1 | conjugal transfer protein TrbD | - |
| F11EC_RS24590 (88920) | 88920..89510 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| F11EC_RS24595 (89500) | 89500..90927 | - | 1428 | WP_000146665.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| F11EC_RS24600 (90927) | 90927..91655 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| F11EC_RS24605 (91642) | 91642..92208 | - | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| F11EC_RS24610 (92230) | 92230..92541 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| F11EC_RS24615 (92556) | 92556..92915 | - | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| F11EC_RS24620 (92949) | 92949..93176 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| F11EC_RS24625 (93270) | 93270..93956 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| F11EC_RS24630 (94150) | 94150..94533 | - | 384 | WP_001151562.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| F11EC_RS24635 (94864) | 94864..95466 | + | 603 | WP_001323326.1 | hypothetical protein | VF |
| F11EC_RS24640 (95762) | 95762..96583 | - | 822 | WP_001234489.1 | DUF932 domain-containing protein | - |
| F11EC_RS24645 (96702) | 96702..96989 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| F11EC_RS24990 (97290) | 97290..97587 | + | 298 | Protein_110 | hypothetical protein | - |
| F11EC_RS24650 (97905) | 97905..98030 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| F11EC_RS24995 (97972) | 97972..98121 | - | 150 | Protein_112 | DUF5431 family protein | - |
| - (98128) | 98128..98327 | - | 200 | NuclAT_0 | - | - |
| - (98128) | 98128..98327 | - | 200 | NuclAT_0 | - | - |
| - (98128) | 98128..98327 | - | 200 | NuclAT_0 | - | - |
| - (98128) | 98128..98327 | - | 200 | NuclAT_0 | - | - |
| F11EC_RS24655 (98295) | 98295..99058 | - | 764 | Protein_113 | plasmid SOS inhibition protein A | - |
| F11EC_RS24660 (99055) | 99055..99489 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| F11EC_RS24665 (99544) | 99544..101502 | - | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| F11EC_RS24670 (101561) | 101561..101794 | - | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| F11EC_RS24675 (101851) | 101851..102378 | - | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| F11EC_RS24680 (102680) | 102680..103132 | + | 453 | WP_024185774.1 | hypothetical protein | - |
| F11EC_RS24685 (103218) | 103218..103781 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| F11EC_RS24690 (103828) | 103828..105189 | - | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| F11EC_RS24695 (105241) | 105241..105471 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| F11EC_RS24705 (106434) | 106434..106625 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| F11EC_RS24710 (106622) | 106622..107044 | - | 423 | WP_000271708.1 | DUF1380 family protein | - |
| F11EC_RS24715 (107091) | 107091..107516 | - | 426 | WP_001198903.1 | antirestriction protein | - |
| F11EC_RS24720 (107932) | 107932..108702 | - | 771 | WP_001004562.1 | hypothetical protein | - |
| F11EC_RS24725 (108747) | 108747..109265 | - | 519 | WP_223364201.1 | DUF1380 family protein | - |
| F11EC_RS24730 (109195) | 109195..109416 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| F11EC_RS24735 (109417) | 109417..110100 | - | 684 | WP_000086169.1 | DNA methylase | - |
| F11EC_RS24740 (110176) | 110176..110487 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| F11EC_RS24745 (110484) | 110484..110624 | - | 141 | Protein_130 | hypothetical protein | - |
| F11EC_RS24750 (110728) | 110728..111900 | + | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| F11EC_RS24755 (111900) | 111900..112697 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| F11EC_RS24760 (112691) | 112691..113521 | - | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|