MGE detailed information
MGE type: Genomic_island MGE length: 22118 bp
Accession: NZ_CP076123 Location: 263894..286011 Organism: Escherichia coli strain F11 Replicon: chromosome
Accession: NZ_CP076123 Location: 263894..286011 Organism: Escherichia coli strain F11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F11EC_RS01185 (260009) | 260009..260434 | - | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
| F11EC_RS01190 (260439) | 260439..261923 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| F11EC_RS01195 (261946) | 261946..262449 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| F11EC_RS01200 (263155) | 263155..263673 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| F11EC_RS01205 (263894) | 263894..265876 | + | 1983 | WP_000053627.1 | hypothetical protein | VF |
| F11EC_RS01210 (265983) | 265983..267029 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| F11EC_RS01215 (267022) | 267022..268461 | + | 1440 | WP_000528851.1 | DUF4150 domain-containing protein | - |
| F11EC_RS01220 (268436) | 268436..268726 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| F11EC_RS01225 (268984) | 268984..269748 | + | 765 | Protein_240 | ISAs1 family transposase | - |
| F11EC_RS01230 (269977) | 269977..270480 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| F11EC_RS01235 (270574) | 270574..271062 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| F11EC_RS01240 (271088) | 271088..271282 | + | 195 | Protein_243 | ISAs1 family transposase | - |
| F11EC_RS01245 (271333) | 271333..272103 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| F11EC_RS01250 (272284) | 272284..272730 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| F11EC_RS01255 (272773) | 272773..275217 | - | 2445 | WP_000973131.1 | hypothetical protein | VF |
| F11EC_RS01260 (275457) | 275457..276035 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| F11EC_RS01265 (276240) | 276240..277007 | + | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| F11EC_RS01270 (276978) | 276978..277718 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| F11EC_RS01275 (278030) | 278030..278779 | + | 750 | WP_000093934.1 | hypothetical protein | VF |
| F11EC_RS01280 (278955) | 278955..279452 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| F11EC_RS01285 (279787) | 279787..281135 | + | 1349 | WP_099156434.1 | IS3-like element IS1397 family transposase | - |
| F11EC_RS01290 (281208) | 281208..282920 | - | 1713 | Protein_253 | hypothetical protein | VF |
| F11EC_RS01295 (282892) | 282892..283677 | + | 786 | WP_000207578.1 | hypothetical protein | VF |
| F11EC_RS01300 (283748) | 283748..284803 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| F11EC_RS01305 (284855) | 284855..285148 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| F11EC_RS01310 (285151) | 285151..285549 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| F11EC_RS01315 (285559) | 285559..286011 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| F11EC_RS01320 (286201) | 286201..287340 | + | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| F11EC_RS01325 (287337) | 287337..287951 | + | 615 | WP_000602124.1 | peptide chain release factor H | - |
| F11EC_RS01330 (288008) | 288008..289465 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| F11EC_RS01335 (289726) | 289726..290184 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - (290780) | 290780..290860 | + | 81 | NuclAT_4 | - | - |
| - (290780) | 290780..290860 | + | 81 | NuclAT_4 | - | - |
| - (290780) | 290780..290860 | + | 81 | NuclAT_4 | - | - |
| - (290780) | 290780..290860 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|