MGE detailed information
MGE type: Prophage MGE length: 47808 bp
Accession: NZ_CP076115 Location: 1393680..1441487 Organism: Ralstonia solanacearum strain Rs-SY1 Replicon: chromosome
Accession: NZ_CP076115 Location: 1393680..1441487 Organism: Ralstonia solanacearum strain Rs-SY1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KME70_RS06530 (KME70_06530) | 1389046..1390254 | + | 1209 | WP_064477835.1 | efflux RND transporter periplasmic adaptor subunit | - |
| KME70_RS06535 (KME70_06535) | 1390321..1393440 | + | 3120 | WP_019718736.1 | efflux RND transporter permease subunit | - |
| KME70_RS06545 (KME70_06545) | 1393680..1394906 | - | 1227 | WP_167801067.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KME70_RS25310 | 1395078..1397174 | - | 2097 | WP_230076474.1 | DNA cytosine methyltransferase | - |
| KME70_RS06565 (KME70_06565) | 1397171..1397413 | - | 243 | WP_069079033.1 | hypothetical protein | - |
| KME70_RS06570 (KME70_06570) | 1397407..1397934 | - | 528 | WP_064047750.1 | hypothetical protein | - |
| KME70_RS06575 (KME70_06575) | 1397931..1398407 | - | 477 | WP_167801068.1 | hypothetical protein | - |
| KME70_RS06580 (KME70_06580) | 1398404..1398958 | - | 555 | WP_069079031.1 | deoxynucleotide monophosphate kinase | - |
| KME70_RS06585 (KME70_06585) | 1399011..1399862 | - | 852 | WP_069079030.1 | DUF2303 family protein | - |
| KME70_RS06590 (KME70_06590) | 1399895..1400239 | - | 345 | WP_069079320.1 | hypothetical protein | - |
| KME70_RS06595 (KME70_06595) | 1400289..1400495 | - | 207 | WP_069079029.1 | hypothetical protein | - |
| KME70_RS06600 (KME70_06600) | 1400497..1400661 | - | 165 | WP_155738973.1 | hypothetical protein | - |
| KME70_RS06605 (KME70_06605) | 1400668..1401069 | - | 402 | WP_049832807.1 | hypothetical protein | - |
| KME70_RS25785 | 1401069..1401197 | - | 129 | WP_257785627.1 | hypothetical protein | - |
| KME70_RS06610 (KME70_06610) | 1401273..1401677 | + | 405 | WP_167801066.1 | hypothetical protein | - |
| KME70_RS06615 (KME70_06615) | 1401740..1401895 | - | 156 | WP_167801069.1 | hypothetical protein | - |
| KME70_RS06620 (KME70_06620) | 1402211..1402420 | - | 210 | WP_064048040.1 | hypothetical protein | - |
| KME70_RS06625 (KME70_06625) | 1402503..1402811 | - | 309 | WP_167801071.1 | hypothetical protein | - |
| KME70_RS06630 (KME70_06630) | 1402815..1403510 | - | 696 | WP_167801072.1 | S24 family peptidase | - |
| KME70_RS06635 (KME70_06635) | 1403615..1403899 | + | 285 | WP_167801073.1 | YdaS family helix-turn-helix protein | - |
| KME70_RS06640 (KME70_06640) | 1404072..1404581 | + | 510 | WP_167801074.1 | hypothetical protein | - |
| KME70_RS06645 (KME70_06645) | 1404574..1404798 | + | 225 | WP_167801075.1 | hypothetical protein | - |
| KME70_RS06650 (KME70_06650) | 1404795..1405079 | + | 285 | WP_167801076.1 | hypothetical protein | - |
| KME70_RS06655 (KME70_06655) | 1405076..1407496 | + | 2421 | WP_167801077.1 | VapE family protein | - |
| KME70_RS06660 (KME70_06660) | 1408567..1408974 | + | 408 | WP_167801078.1 | hypothetical protein | - |
| KME70_RS06665 (KME70_06665) | 1409021..1409665 | + | 645 | WP_167801079.1 | hypothetical protein | - |
| KME70_RS06670 (KME70_06670) | 1409848..1410354 | + | 507 | WP_069079018.1 | terminase small subunit | - |
| KME70_RS06675 (KME70_06675) | 1410377..1412335 | + | 1959 | WP_167801044.1 | phage terminase large subunit family protein | - |
| KME70_RS06680 (KME70_06680) | 1412348..1412569 | + | 222 | WP_167801030.1 | hypothetical protein | - |
| KME70_RS06685 (KME70_06685) | 1412571..1414016 | + | 1446 | WP_167801043.1 | phage portal protein | - |
| KME70_RS06690 (KME70_06690) | 1414091..1416163 | + | 2073 | WP_167801042.1 | Mu-like prophage major head subunit gpT family protein | - |
| KME70_RS06695 (KME70_06695) | 1416247..1416579 | + | 333 | WP_167801041.1 | DUF2190 family protein | - |
| KME70_RS06700 (KME70_06700) | 1416579..1416887 | + | 309 | WP_064048053.1 | hypothetical protein | - |
| KME70_RS06705 (KME70_06705) | 1416884..1417465 | + | 582 | WP_167801040.1 | hypothetical protein | - |
| KME70_RS06710 (KME70_06710) | 1417486..1417716 | + | 231 | WP_064048055.1 | DUF2635 domain-containing protein | - |
| KME70_RS06715 (KME70_06715) | 1417716..1419197 | + | 1482 | WP_167801039.1 | phage tail sheath C-terminal domain-containing protein | - |
| KME70_RS06720 (KME70_06720) | 1419246..1419608 | + | 363 | WP_020371381.1 | phage tail tube protein | - |
| KME70_RS06725 (KME70_06725) | 1419608..1419937 | + | 330 | WP_064048057.1 | phage tail assembly protein | - |
| KME70_RS06730 (KME70_06730) | 1420017..1421738 | + | 1722 | WP_167801038.1 | hypothetical protein | - |
| KME70_RS06735 (KME70_06735) | 1421875..1422102 | - | 228 | WP_215521618.1 | hypothetical protein | - |
| KME70_RS06740 (KME70_06740) | 1422368..1423546 | + | 1179 | WP_167801037.1 | DNA circularization N-terminal domain-containing protein | - |
| KME70_RS06745 (KME70_06745) | 1423543..1424727 | + | 1185 | WP_167801036.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| KME70_RS06750 (KME70_06750) | 1424727..1425299 | + | 573 | WP_167801035.1 | phage baseplate assembly protein V | - |
| KME70_RS06755 (KME70_06755) | 1425299..1425757 | + | 459 | WP_167801034.1 | phage GP46 family protein | - |
| KME70_RS06760 (KME70_06760) | 1425759..1426853 | + | 1095 | WP_215521619.1 | baseplate J/gp47 family protein | - |
| KME70_RS06765 (KME70_06765) | 1426834..1427397 | + | 564 | WP_209317459.1 | DUF2313 domain-containing protein | - |
| KME70_RS06770 (KME70_06770) | 1427421..1428593 | + | 1173 | WP_210148182.1 | hypothetical protein | - |
| KME70_RS06775 (KME70_06775) | 1428597..1429082 | + | 486 | WP_118891129.1 | DUF4376 domain-containing protein | - |
| KME70_RS06780 (KME70_06780) | 1429206..1429697 | + | 492 | WP_071508340.1 | glycoside hydrolase family protein | - |
| KME70_RS06785 (KME70_06785) | 1429698..1430006 | + | 309 | WP_071508341.1 | hypothetical protein | - |
| KME70_RS06790 (KME70_06790) | 1430012..1430281 | + | 270 | WP_118891130.1 | hypothetical protein | - |
| KME70_RS06795 (KME70_06795) | 1430278..1430637 | + | 360 | WP_118891131.1 | hypothetical protein | - |
| KME70_RS06800 (KME70_06800) | 1431179..1431757 | + | 579 | WP_162904219.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| KME70_RS06805 (KME70_06805) | 1431770..1432648 | + | 879 | WP_167801032.1 | hypothetical protein | - |
| KME70_RS06810 (KME70_06810) | 1433132..1434172 | - | 1041 | WP_167801031.1 | LysM domain-containing protein | - |
| KME70_RS06815 (KME70_06815) | 1434424..1434825 | - | 402 | WP_028853163.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| KME70_RS06820 (KME70_06820) | 1434895..1435080 | - | 186 | WP_082240000.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KME70_RS06825 (KME70_06825) | 1435521..1435715 | + | 195 | WP_011001649.1 | hypothetical protein | - |
| KME70_RS06830 (KME70_06830) | 1435787..1437760 | + | 1974 | WP_071623776.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| KME70_RS06835 (KME70_06835) | 1438015..1439364 | + | 1350 | WP_011001651.1 | trigger factor | - |
| KME70_RS06840 (KME70_06840) | 1439394..1440047 | + | 654 | WP_003267806.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| KME70_RS06845 (KME70_06845) | 1440213..1441487 | + | 1275 | WP_011001652.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| KME70_RS06850 (KME70_06850) | 1441658..1444078 | + | 2421 | WP_011001653.1 | endopeptidase La | - |
| KME70_RS06855 (KME70_06855) | 1444252..1444524 | + | 273 | WP_003267811.1 | HU family DNA-binding protein | - |
| KME70_RS25790 | 1444798..1444923 | - | 126 | WP_255322135.1 | hypothetical protein | - |
| KME70_RS25315 | 1444980..1446068 | + | 1089 | WP_237177351.1 | SurA N-terminal domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|