MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 65221 bp
Accession: NZ_CP076026 Location: 1866178..1931398 Organism: Staphylococcus sp. MZ3 Replicon: chromosome
Accession: NZ_CP076026 Location: 1866178..1931398 Organism: Staphylococcus sp. MZ3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KI230_RS08905 (KI230_08905) | 1861656..1862120 | - | 465 | WP_001008549.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| KI230_RS08910 (KI230_08910) | 1862133..1863314 | - | 1182 | WP_001159035.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| KI230_RS08915 (KI230_08915) | 1863325..1863957 | - | 633 | WP_000493888.1 | riboflavin synthase | - |
| KI230_RS08920 (KI230_08920) | 1863964..1865007 | - | 1044 | WP_045177230.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| KI230_RS08925 (KI230_08925) | 1865488..1866990 | - | 1503 | WP_045177232.1 | FAD/NAD(P)-binding protein | - |
| KI230_RS08930 (KI230_08930) | 1867513..1867827 | + | 315 | WP_000221179.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| KI230_RS08935 (KI230_08935) | 1867827..1869119 | + | 1293 | WP_000989117.1 | arsenite efflux transporter membrane subunit ArsB | - |
| KI230_RS08940 (KI230_08940) | 1869137..1869532 | + | 396 | WP_000163235.1 | arsenate reductase (thioredoxin) | - |
| KI230_RS08945 (KI230_08945) | 1869827..1870681 | - | 855 | WP_001032833.1 | N-acetylglucosaminidase | - |
| KI230_RS08950 (KI230_08950) | 1870957..1871181 | - | 225 | WP_000384171.1 | hypothetical protein | - |
| KI230_RS08955 (KI230_08955) | 1871380..1871850 | + | 471 | WP_000671052.1 | RNA polymerase sigma factor SigS | - |
| KI230_RS08960 (KI230_08960) | 1871963..1872406 | + | 444 | WP_001153742.1 | competence protein ComK | - |
| KI230_RS08965 (KI230_08965) | 1872393..1872836 | - | 444 | WP_001030463.1 | hypothetical protein | - |
| KI230_RS08970 (KI230_08970) | 1873132..1873767 | + | 636 | WP_001168908.1 | CPBP family intramembrane metalloprotease SdpA | - |
| KI230_RS08975 (KI230_08975) | 1874208..1874921 | - | 714 | WP_001096494.1 | transaldolase | - |
| KI230_RS08980 (KI230_08980) | 1875181..1875483 | + | 303 | WP_000091445.1 | hypothetical protein | - |
| KI230_RS08985 (KI230_08985) | 1875739..1876104 | + | 366 | WP_001200542.1 | fluoride efflux transporter CrcB | - |
| KI230_RS08990 (KI230_08990) | 1876101..1876454 | + | 354 | WP_000623478.1 | CrcB family protein | - |
| KI230_RS08995 (KI230_08995) | 1876881..1878080 | + | 1200 | WP_276392259.1 | IS110 family transposase | - |
| KI230_RS09000 (KI230_09000) | 1878397..1879230 | - | 834 | WP_000453314.1 | aldo/keto reductase | - |
| KI230_RS09005 (KI230_09005) | 1879442..1880350 | - | 909 | WP_000366163.1 | nuclease-related domain-containing protein | - |
| KI230_RS09010 (KI230_09010) | 1880475..1881668 | - | 1194 | WP_000933822.1 | methionine adenosyltransferase | - |
| KI230_RS09015 (KI230_09015) | 1882040..1883632 | + | 1593 | WP_000109906.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| KI230_RS09020 (KI230_09020) | 1883885..1884631 | - | 747 | WP_072384924.1 | prolyl oligopeptidase family serine peptidase | - |
| KI230_RS09025 (KI230_09025) | 1884636..1885109 | - | 474 | WP_078161169.1 | nucleoside triphosphatase YtkD | - |
| KI230_RS09030 (KI230_09030) | 1885175..1885432 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| KI230_RS09035 (KI230_09035) | 1885429..1886430 | - | 1002 | WP_045177246.1 | o-succinylbenzoate synthase | - |
| KI230_RS09040 (KI230_09040) | 1886435..1887913 | - | 1479 | WP_000348379.1 | o-succinylbenzoate--CoA ligase | - |
| KI230_RS09045 (KI230_09045) | 1888072..1888527 | - | 456 | WP_072384923.1 | DUF4909 domain-containing protein | - |
| KI230_RS09050 (KI230_09050) | 1888830..1889480 | + | 651 | WP_072384920.1 | excalibur calcium-binding domain-containing protein | - |
| KI230_RS09055 (KI230_09055) | 1889561..1890555 | + | 995 | Protein_1791 | DUF4352 domain-containing protein | - |
| KI230_RS09060 (KI230_09060) | 1890631..1891257 | + | 627 | WP_045177256.1 | hypothetical protein | - |
| KI230_RS09065 (KI230_09065) | 1891298..1891639 | + | 342 | WP_045177258.1 | DUF3969 family protein | - |
| KI230_RS09070 (KI230_09070) | 1891740..1892312 | + | 573 | WP_045177260.1 | hypothetical protein | - |
| KI230_RS09075 (KI230_09075) | 1892510..1892923 | - | 414 | Protein_1795 | ImmA/IrrE family metallo-endopeptidase | - |
| KI230_RS13780 | 1892974..1893258 | + | 285 | WP_204177234.1 | hypothetical protein | - |
| KI230_RS09080 (KI230_09080) | 1893415..1893717 | + | 303 | WP_204177232.1 | transposase | - |
| KI230_RS09085 (KI230_09085) | 1893762..1894097 | + | 336 | WP_214958253.1 | DUF961 family protein | - |
| KI230_RS09090 (KI230_09090) | 1894101..1894403 | + | 303 | WP_204177230.1 | hypothetical protein | - |
| KI230_RS09095 (KI230_09095) | 1894583..1895659 | + | 1077 | WP_214958254.1 | replication initiation factor domain-containing protein | - |
| KI230_RS09100 (KI230_09100) | 1895745..1896806 | + | 1062 | WP_117196849.1 | conjugal transfer protein | - |
| KI230_RS09105 (KI230_09105) | 1896811..1897071 | + | 261 | WP_001553885.1 | TcpD family membrane protein | - |
| KI230_RS09110 (KI230_09110) | 1897077..1897466 | + | 390 | WP_031904063.1 | TcpE family conjugal transfer membrane protein | - |
| KI230_RS09115 (KI230_09115) | 1897501..1899996 | + | 2496 | WP_001553882.1 | ATP-binding protein | - |
| KI230_RS09120 (KI230_09120) | 1900229..1901587 | + | 1359 | WP_001553878.1 | FtsK/SpoIIIE domain-containing protein | - |
| KI230_RS09125 (KI230_09125) | 1901594..1901761 | + | 168 | WP_001553877.1 | hypothetical protein | - |
| KI230_RS09130 (KI230_09130) | 1901777..1903690 | + | 1914 | WP_214958255.1 | hypothetical protein | - |
| KI230_RS09135 (KI230_09135) | 1903680..1904717 | + | 1038 | WP_214958256.1 | CHAP domain-containing protein | - |
| KI230_RS09140 (KI230_09140) | 1904724..1905317 | + | 594 | WP_000768323.1 | hypothetical protein | - |
| KI230_RS09145 (KI230_09145) | 1905365..1905718 | + | 354 | WP_214958257.1 | cystatin-like fold lipoprotein | - |
| KI230_RS09150 (KI230_09150) | 1905831..1906337 | + | 507 | WP_204177705.1 | helix-turn-helix domain-containing protein | - |
| KI230_RS09155 (KI230_09155) | 1906303..1906794 | + | 492 | WP_204177707.1 | IS30 family transposase | - |
| KI230_RS09160 (KI230_09160) | 1907067..1907287 | - | 221 | Protein_1813 | hypothetical protein | - |
| KI230_RS09165 (KI230_09165) | 1907590..1907766 | - | 177 | WP_000375477.1 | hypothetical protein | - |
| KI230_RS09170 (KI230_09170) | 1907777..1908160 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| KI230_RS09175 (KI230_09175) | 1908764..1908907 | - | 144 | WP_001549059.1 | transposase | - |
| KI230_RS09180 (KI230_09180) | 1909110..1909205 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - | 1909233..1909292 | - | 60 | - | - | Antitoxin Detail |
| KI230_RS09185 (KI230_09185) | 1909328..1909429 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| KI230_RS09190 (KI230_09190) | 1909407..1909583 | - | 177 | Protein_1819 | transposase | - |
| KI230_RS09195 (KI230_09195) | 1909777..1910154 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| KI230_RS09200 (KI230_09200) | 1910675..1914787 | - | 4113 | WP_000831218.1 | SMEK domain-containing protein | - |
| KI230_RS09205 (KI230_09205) | 1915637..1916836 | - | 1200 | WP_000072624.1 | restriction endonuclease subunit S | - |
| KI230_RS09210 (KI230_09210) | 1916829..1918385 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| KI230_RS09215 (KI230_09215) | 1918549..1918683 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| KI230_RS09220 (KI230_09220) | 1918748..1919467 | - | 720 | WP_214958258.1 | serine protease SplF | - |
| KI230_RS09225 (KI230_09225) | 1919618..1920334 | - | 717 | WP_001038759.1 | serine protease SplE | - |
| KI230_RS09230 (KI230_09230) | 1920455..1921174 | - | 720 | WP_001038865.1 | serine protease SplC | - |
| KI230_RS09235 (KI230_09235) | 1921232..1921954 | - | 723 | WP_001039444.1 | serine protease SplB | - |
| KI230_RS09240 (KI230_09240) | 1922079..1922786 | - | 708 | WP_001039435.1 | serine protease SplA | - |
| KI230_RS09245 (KI230_09245) | 1923750..1924316 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| KI230_RS09250 (KI230_09250) | 1924790..1925488 | - | 699 | WP_072384919.1 | BsaG protein | - |
| KI230_RS09255 (KI230_09255) | 1925485..1926246 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| KI230_RS09260 (KI230_09260) | 1926243..1926935 | - | 693 | WP_001096791.1 | lantibiotic protection ABC transporter ATP-binding subunit | - |
| KI230_RS09265 (KI230_09265) | 1926958..1928331 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| KI230_RS09270 (KI230_09270) | 1928341..1928859 | - | 519 | WP_000504439.1 | phosphopantothenate--cysteine ligase family flavoprotein | - |
| KI230_RS09275 (KI230_09275) | 1928875..1930119 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| KI230_RS09280 (KI230_09280) | 1930112..1933105 | - | 2994 | WP_045176870.1 | lantibiotic dehydratase | - |
| KI230_RS09285 (KI230_09285) | 1933170..1933313 | - | 144 | WP_000432510.1 | gallidermin/nisin family lantibiotic | - |
| KI230_RS09290 (KI230_09290) | 1934175..1935158 | - | 984 | WP_045176869.1 | leukocidin/hemolysin toxin family protein | - |
| KI230_RS09295 (KI230_09295) | 1935160..1936095 | - | 936 | WP_000473596.1 | bi-component leukocidin LukED subunit E | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|