MGE detailed information
MGE type: Mobilizable plasmid MGE length: 59820 bp
Accession: NZ_CP075701 Location: 1..59820 Organism: Escherichia coli strain STEC2018-607 Replicon: plasmid pSTEC2018_607-d
Accession: NZ_CP075701 Location: 1..59820 Organism: Escherichia coli strain STEC2018-607 Replicon: plasmid pSTEC2018_607-d
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX52_RS27045 (JFX52_27045) | 1..1029 | + | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| JFX52_RS27050 (JFX52_27050) | 2298..3506 | - | 1209 | WP_044722415.1 | IS200-IS605 family transposase IS609 | Transposase |
| JFX52_RS28470 | 3907..4059 | + | 153 | Protein_2 | DUF5431 family protein | - |
| JFX52_RS27055 (JFX52_27055) | 4004..4126 | + | 123 | WP_223685802.1 | Hok/Gef family protein | - |
| JFX52_RS27060 (JFX52_27060) | 4276..4872 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| JFX52_RS27065 (JFX52_27065) | 4890..5174 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| JFX52_RS27070 (JFX52_27070) | 5248..5913 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| JFX52_RS27075 (JFX52_27075) | 6511..6840 | + | 330 | WP_000855121.1 | hypothetical protein | - |
| JFX52_RS27080 (JFX52_27080) | 7421..7744 | + | 324 | WP_000427402.1 | hypothetical protein | - |
| JFX52_RS27085 (JFX52_27085) | 7785..7994 | + | 210 | WP_000866037.1 | hypothetical protein | - |
| JFX52_RS27090 (JFX52_27090) | 8092..8316 | + | 225 | WP_000814383.1 | hypothetical protein | - |
| JFX52_RS27095 (JFX52_27095) | 8368..8628 | + | 261 | WP_000702245.1 | hypothetical protein | Toxin Detail |
| JFX52_RS27100 (JFX52_27100) | 8618..8869 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| JFX52_RS27105 (JFX52_27105) | 9419..9697 | + | 279 | WP_000545937.1 | hypothetical protein | - |
| JFX52_RS28475 | 10085..10528 | - | 444 | WP_000192626.1 | hypothetical protein | - |
| JFX52_RS27115 (JFX52_27115) | 10825..11007 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| JFX52_RS27120 (JFX52_27120) | 11032..11469 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| JFX52_RS27125 (JFX52_27125) | 11600..11920 | - | 321 | WP_001310435.1 | hypothetical protein | - |
| JFX52_RS27130 (JFX52_27130) | 12254..12432 | - | 179 | Protein_18 | hypothetical protein | - |
| JFX52_RS28480 | 12767..12886 | - | 120 | Protein_19 | hypothetical protein | - |
| JFX52_RS27140 (JFX52_27140) | 12906..13505 | - | 600 | WP_000091423.1 | hypothetical protein | - |
| JFX52_RS27145 (JFX52_27145) | 13552..14253 | - | 702 | WP_000280996.1 | StbB family protein | - |
| JFX52_RS27150 (JFX52_27150) | 14259..14738 | - | 480 | WP_001058980.1 | hypothetical protein | - |
| JFX52_RS27155 (JFX52_27155) | 15068..15409 | + | 342 | WP_000725934.1 | hypothetical protein | Relaxase |
| JFX52_RS27160 (JFX52_27160) | 15406..19608 | + | 4203 | WP_044722400.1 | relaxase | - |
| JFX52_RS27165 (JFX52_27165) | 19651..20091 | - | 441 | WP_000666082.1 | hypothetical protein | - |
| JFX52_RS27170 (JFX52_27170) | 20663..20869 | - | 207 | WP_000850853.1 | hemolysin expression modulator Hha | - |
| JFX52_RS27175 (JFX52_27175) | 20988..21326 | - | 339 | WP_021575835.1 | hypothetical protein | - |
| JFX52_RS27185 (JFX52_27185) | 21801..23957 | - | 2157 | WP_053001742.1 | type IA DNA topoisomerase | - |
| JFX52_RS27190 (JFX52_27190) | 23962..24537 | - | 576 | WP_044704780.1 | hypothetical protein | - |
| JFX52_RS27195 (JFX52_27195) | 24707..26383 | - | 1677 | WP_044704775.1 | PcfJ domain-containing protein | - |
| JFX52_RS27200 (JFX52_27200) | 26656..27188 | - | 533 | Protein_31 | thermonuclease family protein | - |
| JFX52_RS27205 (JFX52_27205) | 27218..27871 | - | 654 | WP_000572553.1 | hypothetical protein | - |
| JFX52_RS27210 (JFX52_27210) | 27883..29007 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| JFX52_RS27215 (JFX52_27215) | 29373..30659 | - | 1287 | WP_015057162.1 | hypothetical protein | VF |
| JFX52_RS27220 (JFX52_27220) | 30672..31307 | - | 636 | WP_044704741.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JFX52_RS27225 (JFX52_27225) | 31311..31793 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| JFX52_RS27230 (JFX52_27230) | 31860..32417 | - | 558 | WP_000095047.1 | type 4 pilus major pilin | - |
| JFX52_RS27235 (JFX52_27235) | 32462..33571 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JFX52_RS27240 (JFX52_27240) | 33562..35100 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| JFX52_RS27245 (JFX52_27245) | 35125..35619 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| JFX52_RS27250 (JFX52_27250) | 35603..36913 | - | 1311 | WP_225088990.1 | type 4b pilus protein PilO2 | - |
| JFX52_RS27255 (JFX52_27255) | 36964..38607 | - | 1644 | WP_001035589.1 | Outer membrane lipoprotein BfpB | VF |
| JFX52_RS27260 (JFX52_27260) | 38600..39118 | - | 519 | WP_001220540.1 | sigma 54-interacting transcriptional regulator | - |
| JFX52_RS27265 (JFX52_27265) | 39165..41123 | - | 1959 | WP_044722407.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JFX52_RS27270 (JFX52_27270) | 41139..42194 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| JFX52_RS27275 (JFX52_27275) | 42213..43352 | - | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| JFX52_RS27280 (JFX52_27280) | 43342..44112 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| JFX52_RS27285 (JFX52_27285) | 44109..44843 | - | 735 | WP_023155253.1 | Type IV secretion system protein virB8 | VF |
| JFX52_RS27290 (JFX52_27290) | 45009..47366 | - | 2358 | WP_000548953.1 | VirB4 family type IV secretion system protein | - |
| JFX52_RS27295 (JFX52_27295) | 47372..47692 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| JFX52_RS28485 | 47763..48053 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| JFX52_RS27305 (JFX52_27305) | 48053..48637 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| JFX52_RS27310 (JFX52_27310) | 48658..49056 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| JFX52_RS27315 (JFX52_27315) | 49396..49833 | - | 438 | WP_044722409.1 | type IV pilus biogenesis protein PilM | - |
| JFX52_RS27320 (JFX52_27320) | 49839..51074 | - | 1236 | WP_044722410.1 | hypothetical protein | VF |
| JFX52_RS27325 (JFX52_27325) | 51077..51364 | - | 288 | WP_001326593.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| JFX52_RS27330 (JFX52_27330) | 51536..52171 | - | 636 | WP_000835773.1 | hypothetical protein | - |
| JFX52_RS27335 (JFX52_27335) | 52244..52531 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| JFX52_RS27340 (JFX52_27340) | 52544..52798 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| JFX52_RS27345 (JFX52_27345) | 52800..53441 | - | 642 | WP_001425343.1 | hypothetical protein | VF |
| JFX52_RS27350 (JFX52_27350) | 53447..54442 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| JFX52_RS27355 (JFX52_27355) | 54446..54703 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| JFX52_RS27360 (JFX52_27360) | 54700..55002 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| JFX52_RS27365 (JFX52_27365) | 55018..55233 | - | 216 | WP_001360344.1 | hypothetical protein | - |
| JFX52_RS27370 (JFX52_27370) | 55417..55878 | - | 462 | WP_001243166.1 | hypothetical protein | - |
| JFX52_RS27375 (JFX52_27375) | 55889..56059 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| JFX52_RS27380 (JFX52_27380) | 56063..56506 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| JFX52_RS27385 (JFX52_27385) | 56880..57833 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| JFX52_RS27390 (JFX52_27390) | 57860..58036 | - | 177 | WP_000753049.1 | hypothetical protein | - |
| JFX52_RS27395 (JFX52_27395) | 58029..58244 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| JFX52_RS27400 (JFX52_27400) | 58237..58689 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|