MGE detailed information
MGE type: Mobilizable plasmid MGE length: 106835 bp
Accession: NZ_CP075698 Location: 1..106835 Organism: Escherichia coli strain STEC2018-607 Replicon: plasmid pSTEC2018_607-a
Accession: NZ_CP075698 Location: 1..106835 Organism: Escherichia coli strain STEC2018-607 Replicon: plasmid pSTEC2018_607-a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX52_RS25470 () | 1..858 | + | 858 | WP_001425616.1 | incFII family plasmid replication initiator RepA | - |
| JFX52_RS25475 () | 1773..2042 | + | 270 | WP_000079942.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| JFX52_RS25480 () | 2042..2320 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| JFX52_RS25485 () | 2576..3761 | - | 1186 | Protein_4 | IS91 family transposase ISEc37 | Transposase |
| JFX52_RS25490 () | 3761..4126 | - | 366 | WP_033804494.1 | hypothetical protein | - |
| JFX52_RS25495 () | 4462..5070 | - | 609 | WP_032331867.1 | ProQ/FINO family protein | - |
| JFX52_RS25500 () | 5624..6091 | + | 468 | Protein_7 | IS66 family transposase ISSfl3 | Transposase |
| JFX52_RS25505 () | 6820..11148 | + | 4329 | WP_089563312.1 | Autotransporter adhesin SadA | VF |
| JFX52_RS25510 () | 11173..11946 | + | 774 | WP_062859200.1 | Outer membrane protein A | VF |
| JFX52_RS25515 () | 12092..12517 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| JFX52_RS25520 () | 12514..12864 | + | 351 | WP_033804501.1 | IS66 family transposase ISEc47 | Transposase |
| JFX52_RS25525 () | 12895..13440 | + | 546 | Protein_12 | IS66 family transposase ISEc23 | Transposase |
| JFX52_RS25530 () | 13542..14714 | + | 1173 | WP_000952373.1 | IS21 family transposase IS21 | Transposase |
| JFX52_RS25535 () | 14714..15511 | + | 798 | WP_052078243.1 | IS21 family transposase IS21 | Transposase |
| JFX52_RS25540 () | 15573..16319 | + | 747 | Protein_15 | IS66 family transposase ISEc23 | Transposase |
| JFX52_RS25545 () | 16614..17129 | + | 516 | WP_000839945.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| JFX52_RS25550 () | 17131..20127 | + | 2997 | WP_033804503.1 | Hemolysin, chromosomal | VF |
| JFX52_RS25555 () | 20177..22297 | + | 2121 | WP_073972878.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| JFX52_RS25560 () | 22301..23740 | + | 1440 | WP_033804505.1 | Hemolysin secretion protein D, chromosomal | VF |
| JFX52_RS25565 () | 24023..24766 | + | 744 | Protein_20 | IS91 family transposase ISSod25 | Transposase |
| JFX52_RS25570 () | 24904..25179 | - | 276 | WP_001536593.1 | hypothetical protein | - |
| JFX52_RS25575 () | 25173..25817 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| JFX52_RS25580 () | 26046..27017 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| JFX52_RS25585 () | 27022..27414 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| JFX52_RS25590 () | 27419..28690 | - | 1272 | WP_062859199.1 | Y-family DNA polymerase | - |
| JFX52_RS25595 () | 28690..29127 | - | 438 | WP_062859198.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JFX52_RS25600 () | 29124..29372 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| JFX52_RS25605 () | 29828..31282 | - | 1455 | WP_251134711.1 | group II intron reverse transcriptase/maturase | - |
| JFX52_RS25610 () | 31456..32982 | + | 1527 | WP_062859196.1 | IS21 family transposase ISSso4 | Transposase |
| JFX52_RS25615 () | 33008..33763 | + | 756 | WP_033804511.1 | IS21 family transposase ISSso4 | Transposase |
| JFX52_RS25620 () | 33867..34073 | + | 207 | Protein_31 | cobalamin biosynthesis protein CbiX | - |
| JFX52_RS25625 () | 34070..35008 | + | 939 | WP_062859194.1 | Recombination-promoting nuclease RpnA | VF |
| JFX52_RS25630 () | 35008..35265 | + | 258 | WP_167851754.1 | hypothetical protein | - |
| JFX52_RS25635 () | 35296..35547 | - | 252 | WP_062859192.1 | hypothetical protein | - |
| JFX52_RS25640 () | 36138..36986 | + | 849 | WP_001077034.1 | DUF4942 domain-containing protein | - |
| JFX52_RS25645 () | 37072..37407 | - | 336 | WP_000157083.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JFX52_RS25650 () | 37640..37972 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| JFX52_RS25655 () | 37984..40695 | + | 2712 | WP_198785071.1 | Protein TraI | Relaxase |
| JFX52_RS25660 () | 40763..41194 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| JFX52_RS25665 () | 41292..41522 | - | 231 | WP_065406859.1 | hypothetical protein | - |
| JFX52_RS25670 () | 41989..44292 | - | 2304 | WP_062859189.1 | F-type conjugative transfer protein TrbC | - |
| JFX52_RS25675 () | 44273..45391 | - | 1119 | WP_062860904.1 | DsbC family protein | - |
| JFX52_RS25680 () | 45388..46659 | - | 1272 | WP_062860907.1 | IncI1-type conjugal transfer protein TrbA | - |
| JFX52_RS25685 () | 47074..47724 | + | 651 | WP_001536670.1 | IS66 family transposase IS679 | Transposase |
| JFX52_RS25690 () | 47724..48071 | + | 348 | WP_001536669.1 | IS66 family transposase ISCro1 | Transposase |
| JFX52_RS25695 () | 48091..49526 | + | 1436 | Protein_46 | IS66 family transposase ISCro1 | Transposase |
| JFX52_RS25700 () | 50229..52277 | + | 2049 | WP_001536666.1 | TonB-dependent siderophore receptor IreA | - |
| JFX52_RS25705 () | 52421..53628 | + | 1208 | Protein_48 | IS256 family transposase ISEc39 | Transposase |
| JFX52_RS25710 () | 54136..54516 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| JFX52_RS25715 () | 54513..54860 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| JFX52_RS25720 () | 54910..56448 | + | 1539 | WP_151403908.1 | IS66 family transposase ISEc8 | Transposase |
| JFX52_RS25725 () | 56671..56862 | - | 192 | WP_000264909.1 | hypothetical protein | - |
| JFX52_RS25730 () | 56872..57237 | - | 366 | WP_001536659.1 | hypothetical protein | - |
| JFX52_RS25735 () | 57371..57580 | + | 210 | WP_071591568.1 | hypothetical protein | - |
| JFX52_RS25740 () | 57742..61647 | - | 3906 | WP_198777280.1 | Serine protease EspP | VF |
| JFX52_RS25750 () | 63339..63792 | - | 454 | Protein_57 | thermonuclease family protein | - |
| JFX52_RS25755 () | 63953..64576 | + | 624 | WP_001536653.1 | hypothetical protein | - |
| JFX52_RS25760 () | 64664..65119 | + | 456 | WP_198777278.1 | DUF2569 family protein | - |
| JFX52_RS25765 () | 65319..65879 | + | 561 | WP_252356245.1 | phosphoethanolamine transferase domain-containing protein | - |
| JFX52_RS25770 () | 65908..66605 | + | 698 | WP_094096600.1 | IS1 family transposase IS1S | Transposase |
| JFX52_RS25775 () | 66621..67631 | + | 1011 | Protein_62 | phosphoethanolamine transferase | - |
| JFX52_RS25780 () | 67724..67966 | - | 243 | WP_000064387.1 | hypothetical protein | - |
| JFX52_RS25785 () | 68298..68450 | + | 153 | WP_001536636.1 | Hok/Gef family protein | - |
| JFX52_RS25795 () | 68765..69409 | - | 645 | WP_198777327.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JFX52_RS25800 () | 69649..70346 | + | 698 | WP_094096600.1 | IS1 family transposase IS1S | Transposase |
| JFX52_RS25805 () | 70437..71546 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| JFX52_RS25810 () | 71615..72517 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| JFX52_RS25820 () | 73785..74651 | - | 867 | WP_001536599.1 | DMT family transporter | - |
| JFX52_RS25825 () | 74644..75711 | - | 1068 | WP_062850917.1 | hypothetical protein | - |
| JFX52_RS25830 () | 76048..76395 | + | 348 | WP_000142449.1 | DUF6404 family protein | - |
| JFX52_RS25835 () | 76415..77005 | - | 591 | WP_021565150.1 | hypothetical protein | - |
| JFX52_RS25840 () | 77005..77262 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| JFX52_RS25845 () | 77857..78075 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JFX52_RS25850 () | 78077..78382 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JFX52_RS25855 () | 78383..79189 | + | 807 | WP_198777273.1 | site-specific integrase | - |
| JFX52_RS25860 () | 79921..80676 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| JFX52_RS25865 () | 81264..82430 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| JFX52_RS25870 () | 82430..83401 | + | 972 | WP_032248840.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JFX52_RS25875 () | 84053..84955 | + | 903 | WP_122990549.1 | DUF1281 domain-containing protein | - |
| JFX52_RS25880 () | 84959..85264 | + | 306 | WP_033804376.1 | hypothetical protein | - |
| JFX52_RS25885 () | 85341..86024 | + | 684 | WP_032332811.1 | DNA methylase | - |
| JFX52_RS25890 () | 86025..86246 | + | 222 | WP_032332810.1 | hypothetical protein | - |
| JFX52_RS25895 () | 86206..86693 | + | 488 | Protein_85 | DUF1380 family protein | - |
| JFX52_RS25900 () | 86739..87515 | + | 777 | WP_032332908.1 | hypothetical protein | - |
| JFX52_RS25905 () | 87589..88701 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| JFX52_RS25910 () | 89276..89701 | + | 426 | WP_032332487.1 | antirestriction protein | - |
| JFX52_RS25915 () | 89748..90170 | + | 423 | WP_032332488.1 | DUF1380 family protein | - |
| JFX52_RS25920 () | 90167..90358 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| JFX52_RS25925 () | 90630..90878 | - | 249 | WP_077879799.1 | hypothetical protein | - |
| JFX52_RS25930 () | 91396..91626 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| JFX52_RS25935 () | 91678..93039 | + | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| JFX52_RS25940 () | 93083..93646 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| JFX52_RS28395 () | 93798..94079 | + | 282 | WP_071829438.1 | hypothetical protein | - |
| JFX52_RS28400 () | 94320..94526 | + | 207 | WP_052078239.1 | hypothetical protein | - |
| JFX52_RS25945 () | 94552..95004 | + | 453 | WP_000290842.1 | single-stranded DNA-binding protein | - |
| JFX52_RS25950 () | 95066..95299 | + | 234 | WP_001519997.1 | DUF905 family protein | - |
| JFX52_RS25955 () | 95364..97322 | + | 1959 | WP_063072993.1 | ParB/RepB/Spo0J family partition protein | - |
| JFX52_RS25960 () | 97377..97811 | + | 435 | WP_000845907.1 | conjugation system SOS inhibitor PsiB | - |
| JFX52_RS25965 () | 97808..98570 | + | 763 | Protein_101 | plasmid SOS inhibition protein A | - |
| JFX52_RS25970 () | 98539..98727 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 98539..98763 | + | 225 | NuclAT_0 | - | - |
| - () | 98539..98763 | + | 225 | NuclAT_0 | - | - |
| - () | 98539..98763 | + | 225 | NuclAT_0 | - | - |
| - () | 98539..98763 | + | 225 | NuclAT_0 | - | - |
| - | 98696..98761 | - | 66 | - | - | Antitoxin Detail |
| JFX52_RS28405 () | 98749..98898 | + | 150 | Protein_103 | plasmid maintenance protein Mok | - |
| JFX52_RS25975 () | 98840..98965 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JFX52_RS28410 () | 99185..99415 | + | 231 | WP_071845785.1 | hypothetical protein | - |
| JFX52_RS28415 () | 99413..99586 | - | 174 | Protein_106 | hypothetical protein | - |
| JFX52_RS25980 () | 99656..99862 | + | 207 | WP_033804333.1 | hypothetical protein | - |
| JFX52_RS25985 () | 99887..100174 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| JFX52_RS25990 () | 100293..101114 | + | 822 | WP_033804334.1 | DUF932 domain-containing protein | - |
| JFX52_RS25995 () | 101411..101722 | - | 312 | Protein_110 | hypothetical protein | VF |
| JFX52_RS26000 () | 101778..102475 | + | 698 | WP_223429336.1 | IS1 family transposase IS1X2 | Transposase |
| JFX52_RS26005 () | 102491..102829 | + | 339 | Protein_112 | MFS transporter | - |
| JFX52_RS26010 () | 102845..103666 | + | 822 | WP_198777264.1 | alpha/beta hydrolase | - |
| JFX52_RS26015 () | 103720..104424 | + | 705 | WP_198777263.1 | oligogalacturonate-specific porin KdgM family protein | - |
| JFX52_RS26020 () | 104434..105543 | + | 1110 | WP_032237610.1 | N-acetylneuraminate epimerase | - |
| JFX52_RS26025 () | 106276..106533 | + | 258 | WP_000083825.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|