MGE detailed information
MGE type: Prophage MGE length: 70960 bp
Accession: NZ_CP075665 Location: 1590134..1661093 Organism: Escherichia coli strain STEC2018-553 Replicon: chromosome
Accession: NZ_CP075665 Location: 1590134..1661093 Organism: Escherichia coli strain STEC2018-553 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFY30_RS07970 (1587413) | 1587413..1588051 | - | 639 | WP_000191701.1 | HTH-type transcriptional regulator RutR | - |
| JFY30_RS07975 (1588339) | 1588339..1589430 | + | 1092 | WP_001367989.1 | pyrimidine utilization protein A | - |
| JFY30_RS07980 (1589430) | 1589430..1590122 | + | 693 | WP_001307708.1 | peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | - |
| JFY30_RS07985 (1590134) | 1590134..1590520 | + | 387 | WP_001126777.1 | 3-aminoacrylate deaminase | - |
| JFY30_RS07990 (1590528) | 1590528..1591328 | + | 801 | WP_001345413.1 | pyrimidine utilization protein D | - |
| JFY30_RS07995 (1591338) | 1591338..1591928 | + | 591 | WP_001001171.1 | malonic semialdehyde reductase | - |
| JFY30_RS08000 (1591939) | 1591939..1592433 | + | 495 | WP_001028095.1 | pyrimidine utilization flavin reductase protein F | - |
| JFY30_RS08005 (1592454) | 1592454..1593782 | + | 1329 | WP_001240631.1 | pyrimidine utilization transport protein G | - |
| JFY30_RS08010 (1593865) | 1593865..1594038 | - | 174 | WP_001273658.1 | general stress protein | - |
| JFY30_RS08015 (1594807) | 1594807..1594880 | + | 74 | Protein_1586 | Hok/Gef family protein | - |
| JFY30_RS08020 (1594969) | 1594969..1603311 | - | 8343 | Protein_1587 | LPD5 domain-containing protein | - |
| JFY30_RS08025 (1603381) | 1603381..1604646 | - | 1266 | WP_000012443.1 | hypothetical protein | - |
| JFY30_RS08030 (1604657) | 1604657..1604929 | - | 273 | WP_000540399.1 | hypothetical protein | - |
| JFY30_RS08035 (1604939) | 1604939..1605385 | - | 447 | WP_032308635.1 | hypothetical protein | - |
| JFY30_RS08040 (1605388) | 1605388..1606044 | - | 657 | WP_062863480.1 | hypothetical protein | - |
| JFY30_RS08045 (1606139) | 1606139..1606492 | - | 354 | WP_001380385.1 | hypothetical protein | - |
| JFY30_RS08050 (1606628) | 1606628..1607839 | - | 1212 | WP_000710194.1 | YadA-like family protein | - |
| JFY30_RS08055 (1608191) | 1608191..1608331 | - | 141 | WP_000078907.1 | Hok/Gef family protein | - |
| JFY30_RS08060 (1608563) | 1608563..1609297 | - | 735 | WP_000835363.1 | Nodulation protein NolA | VF |
| JFY30_RS08065 (1609388) | 1609388..1610005 | - | 618 | WP_001301884.1 | hypothetical protein | - |
| JFY30_RS08070 (1610011) | 1610011..1610289 | - | 279 | WP_000455635.1 | hypothetical protein | - |
| JFY30_RS08075 (1610304) | 1610304..1611572 | - | 1269 | WP_000197192.1 | DUF1983 domain-containing protein | - |
| JFY30_RS08080 (1611569) | 1611569..1613194 | - | 1626 | WP_024199968.1 | hypothetical protein | - |
| JFY30_RS08085 (1613732) | 1613732..1614406 | - | 675 | WP_106888818.1 | DUF4376 domain-containing protein | - |
| JFY30_RS08090 (1614403) | 1614403..1614627 | - | 225 | WP_001367204.1 | hypothetical protein | - |
| JFY30_RS08095 (1614637) | 1614637..1616673 | - | 2037 | WP_106904485.1 | ISNCY family transposase KIS | Transposase |
| JFY30_RS08100 (1616670) | 1616670..1617320 | - | 651 | WP_000207913.1 | hypothetical protein | - |
| JFY30_RS08105 (1617320) | 1617320..1617869 | - | 550 | Protein_1604 | hypothetical protein | - |
| JFY30_RS08110 (1617853) | 1617853..1618314 | - | 462 | WP_198789117.1 | hypothetical protein | - |
| JFY30_RS08115 (1618364) | 1618364..1618753 | - | 390 | WP_001140442.1 | hypothetical protein | - |
| JFY30_RS08120 (1618809) | 1618809..1620023 | - | 1215 | WP_000214474.1 | N4-gp56 family major capsid protein | - |
| JFY30_RS08125 (1620047) | 1620047..1621054 | - | 1008 | WP_000345012.1 | hypothetical protein | - |
| JFY30_RS08130 (1621212) | 1621212..1623356 | - | 2145 | WP_000787522.1 | hypothetical protein | - |
| JFY30_RS08135 (1623356) | 1623356..1625062 | - | 1707 | WP_000143994.1 | terminase | - |
| JFY30_RS08140 (1625043) | 1625043..1625849 | - | 807 | WP_001086073.1 | terminase | - |
| JFY30_RS08145 (1626258) | 1626258..1626632 | - | 375 | WP_000999684.1 | Gp49 family protein | - |
| JFY30_RS08150 (1626858) | 1626858..1627115 | - | 258 | WP_001283921.1 | hypothetical protein | - |
| JFY30_RS08155 (1627112) | 1627112..1627609 | - | 498 | WP_000644480.1 | KilA-N domain-containing protein | - |
| JFY30_RS08160 (1627808) | 1627808..1628245 | - | 438 | WP_001368309.1 | lysis protein | - |
| JFY30_RS08165 (1628253) | 1628253..1628402 | - | 150 | WP_000455406.1 | hypothetical protein | - |
| JFY30_RS08170 (1628402) | 1628402..1628974 | - | 573 | WP_001056878.1 | phage antirepressor N-terminal domain-containing protein | - |
| JFY30_RS08175 (1629249) | 1629249..1629782 | - | 534 | WP_000087455.1 | lysozyme | - |
| JFY30_RS08180 (1629787) | 1629787..1630002 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| JFY30_RS08185 (1630080) | 1630080..1630325 | - | 246 | WP_001368314.1 | DUF826 domain-containing protein | - |
| JFY30_RS08190 (1630366) | 1630366..1630545 | - | 180 | WP_000143459.1 | DUF1378 family protein | - |
| JFY30_RS08195 (1630681) | 1630681..1632621 | - | 1941 | WP_000874412.1 | SASA family carbohydrate esterase | - |
| JFY30_RS08200 (1633126) | 1633126..1633395 | - | 270 | WP_000752026.1 | 2-dehydro-3-deoxygluconokinase | VF |
| JFY30_RS08205 (1633405) | 1633405..1634352 | - | 948 | WP_001368310.1 | Ribosomal protein S12 methylthiotransferase RimO | VF |
| JFY30_RS08210 (1634859) | 1634859..1635293 | - | 435 | WP_001204859.1 | antiterminator Q family protein | - |
| JFY30_RS08215 (1635286) | 1635286..1635480 | - | 195 | WP_000144767.1 | phage NinH family protein | - |
| JFY30_RS08220 (1635477) | 1635477..1636040 | - | 564 | WP_000813672.1 | recombination protein NinG | - |
| JFY30_RS08225 (1636048) | 1636048..1636497 | - | 450 | WP_000402094.1 | DUF1367 family protein | - |
| JFY30_RS08230 (1636497) | 1636497..1637468 | - | 972 | WP_001193568.1 | primase-helicase zinc-binding domain-containing protein | - |
| JFY30_RS08235 (1637458) | 1637458..1638978 | - | 1521 | WP_000913118.1 | DEAD/DEAH box helicase | - |
| JFY30_RS08240 (1638972) | 1638972..1639349 | - | 378 | WP_001271433.1 | hypothetical protein | - |
| JFY30_RS28685 (1639557) | 1639557..1639826 | - | 270 | WP_001115081.1 | hypothetical protein | - |
| JFY30_RS08250 (1639881) | 1639881..1640084 | - | 204 | WP_001240876.1 | Cro/CI family transcriptional regulator | - |
| JFY30_RS08255 (1640180) | 1640180..1640893 | + | 714 | WP_001056249.1 | LexA family transcriptional regulator | - |
| JFY30_RS08260 (1640990) | 1640990..1641151 | + | 162 | WP_071525586.1 | transmembrane anchored protein | - |
| JFY30_RS08265 (1641331) | 1641331..1642233 | + | 903 | WP_000081325.1 | serine dehydrogenasease | - |
| JFY30_RS08270 (1642234) | 1642234..1642404 | + | 171 | WP_167580584.1 | hypothetical protein | - |
| JFY30_RS08275 (1642521) | 1642521..1642865 | - | 345 | WP_000681611.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JFY30_RS08280 (1642862) | 1642862..1643110 | - | 249 | WP_000513533.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JFY30_RS08285 (1643874) | 1643874..1644644 | + | 771 | WP_000529245.1 | Rha family transcriptional regulator | - |
| JFY30_RS08290 (1644715) | 1644715..1644927 | + | 213 | WP_000917251.1 | hypothetical protein | - |
| JFY30_RS08295 (1644939) | 1644939..1645220 | + | 282 | WP_000934192.1 | hypothetical protein | - |
| JFY30_RS08300 (1645241) | 1645241..1645522 | + | 282 | WP_000995348.1 | host nuclease inhibitor GamL | - |
| JFY30_RS08305 (1645540) | 1645540..1646490 | + | 951 | WP_000459722.1 | RecT family recombinase | - |
| JFY30_RS08310 (1646487) | 1646487..1647176 | + | 690 | WP_000187063.1 | YqaJ viral recombinase family protein | - |
| JFY30_RS08315 (1647176) | 1647176..1647763 | + | 588 | WP_033805714.1 | hypothetical protein | - |
| JFY30_RS08320 (1647838) | 1647838..1648185 | + | 348 | WP_001071603.1 | hypothetical protein | - |
| JFY30_RS08325 (1648249) | 1648249..1649070 | + | 822 | WP_198804585.1 | DUF2303 family protein | - |
| JFY30_RS08330 (1649147) | 1649147..1649590 | + | 444 | WP_062891081.1 | hypothetical protein | - |
| JFY30_RS08335 (1649698) | 1649698..1650576 | + | 879 | WP_024178254.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| JFY30_RS08340 (1650573) | 1650573..1650776 | + | 204 | WP_198779679.1 | hypothetical protein | - |
| JFY30_RS08345 (1650769) | 1650769..1651008 | + | 240 | WP_000476200.1 | hypothetical protein | - |
| JFY30_RS08350 (1651005) | 1651005..1651658 | + | 654 | WP_001368136.1 | ead/Ea22-like family protein | - |
| JFY30_RS29020 (1651741) | 1651741..1652308 | + | 568 | Protein_1654 | DUF551 domain-containing protein | - |
| JFY30_RS08360 (1652664) | 1652664..1653302 | + | 639 | WP_000203832.1 | phage antirepressor Ant | - |
| JFY30_RS08365 (1653358) | 1653358..1653789 | + | 432 | WP_000809302.1 | hypothetical protein | - |
| JFY30_RS08370 (1653786) | 1653786..1654412 | + | 627 | WP_000163444.1 | MT-A70 family methyltransferase | - |
| JFY30_RS08375 (1654372) | 1654372..1654584 | + | 213 | WP_001291843.1 | DUF1382 family protein | - |
| JFY30_RS08380 (1654620) | 1654620..1654991 | + | 372 | WP_215744931.1 | DUF1627 domain-containing protein | - |
| JFY30_RS08385 (1655135) | 1655135..1655368 | + | 234 | WP_021351637.1 | hypothetical protein | - |
| JFY30_RS08390 (1655356) | 1655356..1655607 | + | 252 | WP_000497816.1 | DUF4222 domain-containing protein | - |
| JFY30_RS08395 (1655653) | 1655653..1655937 | + | 285 | WP_001208773.1 | excisionase family protein | - |
| JFY30_RS08400 (1655990) | 1655990..1657300 | + | 1311 | WP_001368133.1 | Succinyl-CoA--L-malate CoA-transferase beta subunit ; Integrase | Integrase |
| JFY30_RS08405 (1657297) | 1657297..1657875 | + | 579 | WP_000607019.1 | NAD(P)H:quinone oxidoreductase | - |
| JFY30_RS08410 (1657896) | 1657896..1658123 | + | 228 | WP_001143120.1 | YccJ family protein | - |
| JFY30_RS08415 (1658161) | 1658161..1659402 | - | 1242 | WP_001044314.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| JFY30_RS08420 (1659696) | 1659696..1660384 | - | 689 | Protein_1667 | hypothetical protein | - |
| JFY30_RS08430 (1661150) | 1661150..1661728 | - | 579 | Protein_1669 | hypothetical protein | - |
| JFY30_RS08435 (1661989) | 1661989..1662909 | + | 921 | WP_000420617.1 | curved DNA-binding protein | - |
| JFY30_RS08440 (1662909) | 1662909..1663214 | + | 306 | WP_000024560.1 | chaperone modulator CbpM | - |
| JFY30_RS08445 (1663307) | 1663307..1663906 | - | 600 | WP_000209869.1 | molecular chaperone TorD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|