MGE detailed information
MGE type: Prophage MGE length: 71920 bp
Accession: NZ_CP075663 Location: 1044563..1116482 Organism: Escherichia coli strain STEC2017-197 Replicon: chromosome
Accession: NZ_CP075663 Location: 1044563..1116482 Organism: Escherichia coli strain STEC2017-197 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX55_RS05255 (1040082) | 1040082..1041452 | + | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| JFX55_RS05260 (1041620) | 1041620..1042291 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| JFX55_RS05265 (1042291) | 1042291..1043751 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| JFX55_RS05270 (1044563) | 1044563..1044844 | - | 282 | WP_000133415.1 | hypothetical protein | - |
| JFX55_RS05275 (1044858) | 1044858..1046519 | - | 1662 | WP_032326831.1 | terminase large subunit | - |
| JFX55_RS05280 (1046503) | 1046503..1046859 | - | 357 | WP_000113645.1 | phage terminase small subunit P27 family | - |
| JFX55_RS05285 (1046982) | 1046982..1047164 | - | 183 | WP_024166058.1 | hypothetical protein | - |
| JFX55_RS05290 (1047148) | 1047148..1047588 | - | 441 | WP_001145908.1 | HNH endonuclease | - |
| JFX55_RS05295 (1047588) | 1047588..1047884 | - | 297 | WP_000134111.1 | head-tail connector protein | - |
| JFX55_RS05300 (1047881) | 1047881..1048219 | - | 339 | WP_016241300.1 | phage head closure protein | - |
| JFX55_RS05305 (1048216) | 1048216..1049427 | - | 1212 | WP_032208055.1 | phage portal protein | - |
| JFX55_RS05310 (1049429) | 1049429..1050001 | - | 573 | WP_000504056.1 | HK97 family phage prohead protease | - |
| JFX55_RS05315 (1050041) | 1050041..1051198 | - | 1158 | WP_001137341.1 | phage major capsid protein | - |
| JFX55_RS05320 (1051503) | 1051503..1051751 | - | 249 | WP_000233314.1 | PerC family transcriptional regulator | - |
| JFX55_RS05325 (1051762) | 1051762..1052172 | - | 411 | WP_077173506.1 | single-stranded DNA-binding protein | - |
| JFX55_RS05330 (1052169) | 1052169..1052420 | - | 252 | WP_077173505.1 | hypothetical protein | - |
| JFX55_RS05335 (1052621) | 1052621..1054018 | - | 1398 | WP_198790220.1 | helicase RepA family protein | - |
| JFX55_RS05340 (1054015) | 1054015..1054314 | - | 300 | WP_044697520.1 | DUF4222 domain-containing protein | - |
| JFX55_RS05345 (1054320) | 1054320..1054547 | - | 228 | WP_044697521.1 | hypothetical protein | - |
| JFX55_RS05350 (1054540) | 1054540..1054737 | - | 198 | WP_071826870.1 | host cell division inhibitor Icd-like protein | - |
| JFX55_RS05355 (1054924) | 1054924..1055103 | + | 180 | WP_001142000.1 | YlcI/YnfO family protein | - |
| JFX55_RS05360 (1055161) | 1055161..1055388 | + | 228 | WP_072033186.1 | hypothetical protein | - |
| JFX55_RS05365 (1055665) | 1055665..1055844 | + | 180 | WP_000190458.1 | YlcI/YnfO family protein | - |
| JFX55_RS05370 (1055902) | 1055902..1056105 | + | 204 | WP_000182306.1 | hypothetical protein | - |
| JFX55_RS05375 (1056382) | 1056382..1056570 | - | 189 | WP_000953271.1 | AlpA family transcriptional regulator | - |
| JFX55_RS05380 (1056945) | 1056945..1058174 | - | 1230 | WP_000085265.1 | Prophage integrase IntS ; Integrase | Integrase |
| JFX55_RS05385 (1058423) | 1058423..1059544 | + | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| JFX55_RS05390 (1059690) | 1059690..1060919 | - | 1230 | WP_000359460.1 | peptidase T | - |
| JFX55_RS05395 (1061169) | 1061169..1062305 | + | 1137 | WP_000531594.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| JFX55_RS05400 (1062289) | 1062289..1063152 | + | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| JFX55_RS05405 (1063318) | 1063318..1063647 | + | 330 | WP_022581964.1 | YkgJ family cysteine cluster protein | - |
| JFX55_RS05410 (1063811) | 1063811..1064485 | - | 675 | WP_001373129.1 | DUF4376 domain-containing protein | - |
| JFX55_RS05415 (1064497) | 1064497..1064709 | - | 213 | WP_000438830.1 | hypothetical protein | - |
| JFX55_RS05420 (1064719) | 1064719..1066422 | - | 1704 | WP_215741691.1 | ISNCY family transposase KIS | Transposase |
| JFX55_RS05425 (1066567) | 1066567..1066707 | - | 141 | WP_000078855.1 | Hok/Gef family protein | - |
| JFX55_RS05430 (1066906) | 1066906..1070592 | - | 3687 | WP_215741692.1 | phage tail protein | - |
| JFX55_RS05435 (1070833) | 1070833..1071414 | - | 582 | WP_231237578.1 | tail assembly protein | - |
| JFX55_RS05440 (1071411) | 1071411..1072154 | - | 744 | WP_215741693.1 | C40 family peptidase | - |
| JFX55_RS05445 (1072165) | 1072165..1072863 | - | 699 | WP_202850542.1 | phage minor tail protein L | - |
| JFX55_RS05450 (1072863) | 1072863..1073192 | - | 330 | WP_032206995.1 | phage tail protein | - |
| JFX55_RS05455 (1073189) | 1073189..1075834 | - | 2646 | WP_062896387.1 | phage tail tape measure protein | - |
| JFX55_RS05460 (1075884) | 1075884..1076186 | - | 303 | Protein_1076 | phage tail assembly protein T | - |
| JFX55_RS05465 (1076213) | 1076213..1076635 | - | 423 | WP_000479054.1 | phage minor tail protein G | - |
| JFX55_RS05470 (1076651) | 1076651..1077400 | - | 750 | WP_022581880.1 | phage tail protein | - |
| JFX55_RS05475 (1077408) | 1077408..1077806 | - | 399 | WP_001561860.1 | phage tail terminator protein | - |
| JFX55_RS05480 (1077819) | 1077819..1078442 | - | 624 | WP_022581879.1 | phage tail protein | - |
| JFX55_RS05485 (1078445) | 1078445..1078726 | - | 282 | WP_022581878.1 | DNA breaking-rejoining protein | - |
| JFX55_RS05490 (1078719) | 1078719..1079045 | - | 327 | WP_001097058.1 | DUF2190 family protein | - |
| JFX55_RS05495 (1079133) | 1079133..1081157 | - | 2025 | WP_022581877.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| JFX55_RS05500 (1081102) | 1081102..1082604 | - | 1503 | WP_000974564.1 | phage portal protein | - |
| JFX55_RS05505 (1082604) | 1082604..1082816 | - | 213 | WP_000102415.1 | hypothetical protein | - |
| JFX55_RS05510 (1082813) | 1082813..1084936 | - | 2124 | WP_047090813.1 | phage terminase large subunit family protein | - |
| JFX55_RS05515 (1084933) | 1084933..1085409 | - | 477 | WP_000348556.1 | DUF1441 family protein | - |
| JFX55_RS05520 (1085924) | 1085924..1086109 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| JFX55_RS05525 (1086331) | 1086331..1086444 | - | 114 | WP_000675931.1 | hypothetical protein | - |
| JFX55_RS05530 (1086666) | 1086666..1087199 | - | 534 | WP_001092875.1 | lysozyme | - |
| JFX55_RS05535 (1087711) | 1087711..1088196 | - | 486 | WP_001457151.1 | hypothetical protein | - |
| JFX55_RS05540 (1088200) | 1088200..1088415 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| JFX55_RS05545 (1088911) | 1088911..1090884 | - | 1974 | WP_137568588.1 | DUF1737 domain-containing protein | - |
| JFX55_RS05550 (1091396) | 1091396..1091665 | - | 270 | WP_000738080.1 | Shiga toxin subunit B | VF |
| JFX55_RS05555 (1091677) | 1091677..1092636 | - | 960 | WP_001365055.1 | Shiga toxin subunit A | VF |
| JFX55_RS05575 (1093019) | 1093019..1094077 | - | 1059 | WP_062896563.1 | site-specific DNA-methyltransferase | - |
| JFX55_RS05580 (1094228) | 1094228..1094425 | - | 198 | WP_000917750.1 | hypothetical protein | - |
| JFX55_RS05585 (1094643) | 1094643..1095203 | - | 561 | WP_000640044.1 | DUF1133 family protein | - |
| JFX55_RS05590 (1095212) | 1095212..1095571 | - | 360 | WP_000904153.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JFX55_RS05595 (1095584) | 1095584..1096633 | - | 1050 | WP_215741694.1 | DUF968 domain-containing protein | - |
| JFX55_RS05600 (1096635) | 1096635..1096907 | - | 273 | WP_032212035.1 | hypothetical protein | - |
| JFX55_RS05605 (1097074) | 1097074..1097229 | - | 156 | WP_000813246.1 | Hok/Gef family protein | - |
| JFX55_RS05610 (1097520) | 1097520..1098035 | - | 516 | WP_001289995.1 | hypothetical protein | - |
| JFX55_RS05615 (1098032) | 1098032..1098208 | - | 177 | WP_000753060.1 | hypothetical protein | - |
| JFX55_RS05620 (1098201) | 1098201..1098383 | - | 183 | WP_022581296.1 | hypothetical protein | - |
| JFX55_RS05625 (1098531) | 1098531..1098836 | - | 306 | WP_053294093.1 | DUF4406 domain-containing protein | - |
| JFX55_RS05630 (1098833) | 1098833..1099114 | - | 282 | WP_072094476.1 | DNA-binding protein | - |
| JFX55_RS05635 (1099147) | 1099147..1099908 | - | 762 | WP_180201617.1 | DUF1627 domain-containing protein | - |
| JFX55_RS05640 (1099938) | 1099938..1100678 | - | 741 | WP_000790459.1 | ATP-binding protein | - |
| JFX55_RS05645 (1100685) | 1100685..1101650 | - | 966 | WP_000054520.1 | hypothetical protein | - |
| JFX55_RS05650 (1101631) | 1101631..1102152 | - | 522 | WP_000705386.1 | toxin YdaT family protein | - |
| JFX55_RS05655 (1102136) | 1102136..1102414 | - | 279 | WP_000548554.1 | YdaS family helix-turn-helix protein | - |
| JFX55_RS05660 (1102531) | 1102531..1102929 | + | 399 | WP_000209117.1 | helix-turn-helix domain-containing protein | - |
| JFX55_RS05665 (1102959) | 1102959..1103147 | + | 189 | WP_001090455.1 | hypothetical protein | Antitoxin Detail |
| JFX55_RS05670 (1103151) | 1103151..1103438 | + | 288 | WP_001444087.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JFX55_RS05675 (1103710) | 1103710..1103862 | + | 153 | WP_000380321.1 | DUF1391 family protein | - |
| JFX55_RS05680 (1103874) | 1103874..1104242 | + | 369 | WP_028985920.1 | hypothetical protein | - |
| JFX55_RS05685 (1105027) | 1105027..1105215 | + | 189 | WP_000450222.1 | cell division inhibition protein DicB | - |
| JFX55_RS05690 (1105212) | 1105212..1105400 | + | 189 | WP_022581374.1 | DUF1482 family protein | - |
| JFX55_RS05695 (1105493) | 1105493..1107895 | + | 2403 | WP_215741695.1 | exonuclease | - |
| JFX55_RS05700 (1107957) | 1107957..1108226 | + | 270 | WP_000003742.1 | excisionase | - |
| JFX55_RS05705 (1108195) | 1108195..1109313 | + | 1119 | WP_000074988.1 | hypothetical protein ; Integrase | Integrase |
| JFX55_RS05710 (1109480) | 1109480..1110274 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| JFX55_RS05715 (1110271) | 1110271..1111317 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| JFX55_RS05720 (1111375) | 1111375..1111836 | + | 462 | WP_000076381.1 | DUF3592 domain-containing protein | - |
| JFX55_RS05725 (1111833) | 1111833..1112621 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| JFX55_RS05730 (1112760) | 1112760..1113581 | - | 822 | WP_000952727.1 | NAD-dependent protein deacylase | - |
| JFX55_RS05735 (1113597) | 1113597..1114508 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| JFX55_RS05740 (1114537) | 1114537..1115781 | - | 1245 | WP_001251350.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| JFX55_RS05745 (1115781) | 1115781..1116482 | - | 702 | WP_001033694.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| JFX55_RS05750 (1116475) | 1116475..1117674 | - | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| JFX55_RS05755 (1117936) | 1117936..1119009 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|