MGE detailed information
MGE type: Genomic_island MGE length: 11526 bp
Accession: NZ_CP075649 Location: 4001656..4013181 Organism: Escherichia coli strain STEC17-190 Replicon: chromosome
Accession: NZ_CP075649 Location: 4001656..4013181 Organism: Escherichia coli strain STEC17-190 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX56_RS19190 (3997236) | 3997236..3997688 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| JFX56_RS19195 (3997685) | 3997685..3998740 | - | 1056 | WP_121351665.1 | DNA polymerase IV | - |
| JFX56_RS19200 (3998811) | 3998811..3999596 | - | 786 | WP_000207590.1 | putative lateral flagellar export/assembly protein LafU | - |
| JFX56_RS19205 (3999568) | 3999568..4001280 | + | 1713 | Protein_3788 | flagellar biosynthesis protein FlhA | - |
| JFX56_RS19210 (4001385) | 4001385..4001663 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| JFX56_RS19215 (4001656) | 4001656..4002012 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| JFX56_RS19220 (4002069) | 4002069..4002842 | - | 774 | WP_136755766.1 | hypothetical protein | VF |
| JFX56_RS19225 (4003028) | 4003028..4003288 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| JFX56_RS19230 (4003291) | 4003291..4003569 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| JFX56_RS19235 (4003725) | 4003725..4004465 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| JFX56_RS19240 (4004436) | 4004436..4005203 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| JFX56_RS19245 (4005409) | 4005409..4005987 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| JFX56_RS19250 (4006227) | 4006227..4008671 | + | 2445 | WP_198776747.1 | hypothetical protein | VF |
| JFX56_RS19255 (4008714) | 4008714..4009160 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| JFX56_RS19260 (4009341) | 4009341..4010111 | + | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| JFX56_RS19265 (4010153) | 4010153..4011289 | - | 1137 | Protein_3800 | ISAs1 family transposase ISEc1 | Transposase |
| JFX56_RS19270 (4011392) | 4011392..4012518 | - | 1127 | Protein_3801 | ISAs1 family transposase ISEc26 | Transposase |
| JFX56_RS19275 (4012599) | 4012599..4012784 | + | 186 | WP_122985282.1 | hypothetical protein | - |
| JFX56_RS24980 (4012699) | 4012699..4013181 | - | 483 | WP_000939262.1 | protein YdcD | - |
| JFX56_RS19285 (4013165) | 4013165..4017403 | - | 4239 | WP_171463335.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|