MGE detailed information
MGE type: Prophage MGE length: 75333 bp
Accession: NZ_CP075649 Location: 2442624..2517956 Organism: Escherichia coli strain STEC17-190 Replicon: chromosome
Accession: NZ_CP075649 Location: 2442624..2517956 Organism: Escherichia coli strain STEC17-190 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX56_RS11645 (2438715) | 2438715..2439080 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| JFX56_RS11650 (2439067) | 2439067..2439396 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| JFX56_RS11655 (2439435) | 2439435..2440256 | - | 822 | WP_001260855.1 | serine protease | - |
| JFX56_RS11660 (2440356) | 2440356..2440439 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| JFX56_RS11665 (2440532) | 2440532..2440840 | - | 309 | WP_001342195.1 | acid resistance repetitive basic protein Asr | - |
| JFX56_RS11675 (2441264) | 2441264..2442517 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| JFX56_RS11680 (2442624) | 2442624..2443517 | + | 894 | WP_001019530.1 | hypothetical protein | VF |
| JFX56_RS11685 (2443652) | 2443652..2444872 | + | 1221 | WP_136755633.1 | DNA-binding transcriptional repressor Mlc | - |
| JFX56_RS11690 (2444997) | 2444997..2445692 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JFX56_RS11695 (2445645) | 2445645..2446937 | - | 1293 | WP_071586432.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JFX56_RS11700 (2447096) | 2447096..2447710 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JFX56_RS11705 (2447753) | 2447753..2448607 | - | 855 | WP_000526494.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| JFX56_RS11710 (2448609) | 2448609..2449226 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| JFX56_RS11715 (2449237) | 2449237..2451660 | - | 2424 | WP_001697124.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| JFX56_RS11720 (2451721) | 2451721..2454147 | - | 2427 | WP_198776743.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| JFX56_RS11725 (2454346) | 2454346..2454651 | - | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| JFX56_RS11730 (2454759) | 2454759..2455469 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JFX56_RS11735 (2455472) | 2455472..2456032 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JFX56_RS11740 (2456067) | 2456067..2456408 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| JFX56_RS11745 (2456543) | 2456543..2456869 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JFX56_RS11750 (2457075) | 2457075..2458289 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JFX56_RS11755 (2458301) | 2458301..2459320 | + | 1020 | WP_000836054.1 | Zn-dependent oxidoreductase | - |
| JFX56_RS11760 (2459508) | 2459508..2460788 | - | 1281 | WP_021533434.1 | hypothetical protein ; Integrase | Integrase |
| JFX56_RS11765 (2460823) | 2460823..2461074 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| JFX56_RS11770 (2461147) | 2461147..2463618 | - | 2472 | WP_000048324.1 | exonuclease | - |
| JFX56_RS11775 (2463712) | 2463712..2463903 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| JFX56_RS11780 (2463900) | 2463900..2464088 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JFX56_RS24940 (2465049) | 2465049..2465150 | - | 102 | Protein_2318 | protein YdfB | - |
| JFX56_RS11790 (2465152) | 2465152..2465307 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| JFX56_RS11795 (2465500) | 2465500..2465907 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| JFX56_RS11800 (2465985) | 2465985..2466212 | + | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| JFX56_RS11805 (2466196) | 2466196..2466717 | + | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| JFX56_RS11810 (2466698) | 2466698..2467663 | + | 966 | WP_000054506.1 | hypothetical protein | - |
| JFX56_RS11815 (2467704) | 2467704..2468123 | + | 420 | WP_001151195.1 | DUF977 family protein | - |
| JFX56_RS11820 (2468178) | 2468178..2469227 | + | 1050 | Protein_2325 | ISNCY family transposase ISCARN112 | Transposase |
| JFX56_RS24780 (2469348) | 2469348..2469497 | + | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| JFX56_RS11825 (2469912) | 2469912..2471525 | - | 1614 | WP_001499133.1 | IS66 family transposase ISEc43 | Transposase |
| JFX56_RS11830 (2471556) | 2471556..2471906 | - | 351 | WP_000624684.1 | IS66 family transposase ISEc47 | Transposase |
| JFX56_RS11835 (2471903) | 2471903..2472328 | - | 426 | WP_000422722.1 | IS66 family transposase ISEc23 | Transposase |
| JFX56_RS11840 (2472474) | 2472474..2472806 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| JFX56_RS11845 (2473009) | 2473009..2473314 | - | 306 | WP_001326990.1 | protein YdfV | - |
| JFX56_RS11850 (2473339) | 2473339..2473578 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JFX56_RS11855 (2473578) | 2473578..2473865 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JFX56_RS11860 (2473937) | 2473937..2474092 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JFX56_RS11865 (2474309) | 2474309..2474560 | + | 252 | WP_000980994.1 | protein Rem | - |
| JFX56_RS11870 (2474627) | 2474627..2474905 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| JFX56_RS11875 (2474907) | 2474907..2475956 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| JFX56_RS11880 (2475970) | 2475970..2476722 | + | 753 | WP_001047135.1 | antitermination protein | - |
| JFX56_RS11885 (2477000) | 2477000..2477089 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| JFX56_RS11890 (2477144) | 2477144..2477356 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JFX56_RS11895 (2477656) | 2477656..2477871 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JFX56_RS11900 (2478235) | 2478235..2478405 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| JFX56_RS11905 (2478625) | 2478625..2478840 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JFX56_RS11910 (2478845) | 2478845..2479156 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| JFX56_RS11915 (2479153) | 2479153..2479686 | + | 534 | WP_001092971.1 | lysozyme | - |
| JFX56_RS11920 (2479683) | 2479683..2480180 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JFX56_RS11925 (2480544) | 2480544..2480756 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JFX56_RS11930 (2480767) | 2480767..2480955 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JFX56_RS11935 (2480958) | 2480958..2481023 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| JFX56_RS11940 (2481028) | 2481028..2481258 | + | 231 | WP_000720962.1 | protein YnfN | - |
| JFX56_RS11945 (2481430) | 2481430..2481603 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JFX56_RS11950 (2481755) | 2481755..2482165 | - | 411 | WP_136755801.1 | DUF1398 domain-containing protein | - |
| JFX56_RS11955 (2482223) | 2482223..2482456 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JFX56_RS11960 (2482845) | 2482845..2483390 | + | 546 | WP_000453576.1 | DNA-packaging protein | - |
| JFX56_RS11965 (2483365) | 2483365..2485290 | + | 1926 | WP_021514143.1 | phage terminase large subunit family protein | - |
| JFX56_RS11970 (2485287) | 2485287..2485493 | + | 207 | WP_000198149.1 | gpW family protein | - |
| JFX56_RS11975 (2485490) | 2485490..2487091 | + | 1602 | WP_001368373.1 | phage portal protein | - |
| JFX56_RS11980 (2487072) | 2487072..2488391 | + | 1320 | WP_000123305.1 | S49 family peptidase | - |
| JFX56_RS11985 (2488401) | 2488401..2488733 | + | 333 | WP_001299443.1 | head decoration protein | - |
| JFX56_RS11990 (2488789) | 2488789..2489814 | + | 1026 | WP_000063236.1 | major capsid protein | - |
| JFX56_RS11995 (2489915) | 2489915..2491243 | + | 1329 | WP_000547316.1 | IS4 family transposase IS4 | Transposase |
| JFX56_RS12000 (2491295) | 2491295..2491690 | + | 396 | WP_000158875.1 | DNA-packaging protein FI | - |
| JFX56_RS12005 (2491702) | 2491702..2492055 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| JFX56_RS12010 (2492067) | 2492067..2492645 | + | 579 | WP_136755790.1 | phage tail protein | - |
| JFX56_RS12015 (2492642) | 2492642..2493037 | + | 396 | WP_000683129.1 | phage minor tail U family protein | - |
| JFX56_RS12020 (2493045) | 2493045..2493785 | + | 741 | WP_001361512.1 | phage tail protein | - |
| JFX56_RS12025 (2493801) | 2493801..2494223 | + | 423 | WP_000479193.1 | phage minor tail protein G | - |
| JFX56_RS12030 (2494205) | 2494205..2494639 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| JFX56_RS12035 (2494632) | 2494632..2497211 | + | 2580 | WP_089626996.1 | phage tail tape measure protein | - |
| JFX56_RS12040 (2497208) | 2497208..2497537 | + | 330 | WP_000847331.1 | phage tail protein | - |
| JFX56_RS12045 (2497537) | 2497537..2498235 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| JFX56_RS12050 (2498241) | 2498241..2498984 | + | 744 | WP_016236213.1 | C40 family peptidase | - |
| JFX56_RS12055 (2498981) | 2498981..2499553 | + | 573 | WP_000847679.1 | tail assembly protein | - |
| JFX56_RS12060 (2499614) | 2499614..2503093 | + | 3480 | WP_198779788.1 | host specificity protein J | - |
| JFX56_RS12065 (2503161) | 2503161..2503760 | + | 600 | WP_032292241.1 | hypothetical protein | VF |
| JFX56_RS12070 (2503825) | 2503825..2507175 | + | 3351 | WP_215735917.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JFX56_RS12075 (2507175) | 2507175..2507750 | + | 576 | WP_000885610.1 | tail fiber assembly protein | - |
| JFX56_RS12080 (2507848) | 2507848..2508438 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JFX56_RS12085 (2508755) | 2508755..2508988 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JFX56_RS12090 (2509057) | 2509057..2509170 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| JFX56_RS12095 (2509773) | 2509773..2511056 | + | 1284 | Protein_2381 | MHS family MFS transporter YdfJ | - |
| JFX56_RS12100 (2511145) | 2511145..2512605 | + | 1461 | WP_000527753.1 | mannitol dehydrogenase family protein | - |
| JFX56_RS12105 (2512641) | 2512641..2512844 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JFX56_RS12110 (2513022) | 2513022..2513708 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| JFX56_RS12115 (2513797) | 2513797..2514543 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| JFX56_RS12120 (2514680) | 2514680..2516725 | + | 2046 | WP_001299399.1 | peptidyl-dipeptidase Dcp | - |
| JFX56_RS12125 (2516770) | 2516770..2517288 | - | 519 | WP_001024810.1 | 2-oxo-tetronate isomerase | - |
| JFX56_RS12130 (2517564) | 2517564..2517956 | + | 393 | WP_000671744.1 | YdeI family stress tolerance OB fold protein | - |
| JFX56_RS12135 (2518211) | 2518211..2519101 | + | 891 | WP_000592826.1 | diguanylate cyclase DgcZ | - |
| JFX56_RS12140 (2519216) | 2519216..2519320 | - | 105 | WP_211180496.1 | protein MgtT | - |
| JFX56_RS12145 (2519320) | 2519320..2519415 | - | 96 | WP_000901367.1 | protein MgtS | - |
| JFX56_RS12150 (2519542) | 2519542..2520729 | - | 1188 | WP_001054171.1 | efflux MFS transporter YdeE | - |
| JFX56_RS12155 (2520924) | 2520924..2521823 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| JFX56_RS12160 (2521863) | 2521863..2522561 | - | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|