MGE detailed information
MGE type: Prophage MGE length: 117021 bp
Accession: NZ_CP075632 Location: 1370224..1487244 Organism: Escherichia coli strain 2018-166 Replicon: chromosome
Accession: NZ_CP075632 Location: 1370224..1487244 Organism: Escherichia coli strain 2018-166 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX80_RS06900 (1365781) | 1365781..1368204 | + | 2424 | WP_062863523.1 | poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA | - |
| JFX80_RS06905 (1368213) | 1368213..1370231 | + | 2019 | WP_000945572.1 | poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB | - |
| JFX80_RS06910 (1370224) | 1370224..1371549 | + | 1326 | WP_000610452.1 | Poly-beta-1,6-N-acetyl-D-glucosamine synthase | VF |
| JFX80_RS06915 (1371551) | 1371551..1371964 | + | 414 | WP_001061095.1 | poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD | - |
| JFX80_RS06920 (1372014) | 1372014..1372802 | - | 789 | WP_000533522.1 | phosphate starvation-inducible protein PhoH | - |
| JFX80_RS06925 (1373421) | 1373421..1374692 | - | 1272 | WP_001199172.1 | iron uptake transporter deferrochelatase/peroxidase subunit | - |
| JFX80_RS06930 (1374698) | 1374698..1374817 | - | 120 | Protein_1371 | ferrous iron transporter | - |
| JFX80_RS06940 (1375583) | 1375583..1376602 | - | 1020 | Protein_1373 | iron uptake system protein EfeO | - |
| JFX80_RS06945 (1376660) | 1376660..1377490 | - | 831 | WP_085459495.1 | iron uptake transporter permease EfeU | - |
| JFX80_RS06950 (1378033) | 1378033..1379541 | - | 1509 | WP_001018486.1 | sodium/proline symporter PutP | - |
| JFX80_RS06955 (1379700) | 1379700..1379909 | - | 210 | WP_000979516.1 | hypothetical protein | - |
| JFX80_RS06960 (1379964) | 1379964..1383926 | + | 3963 | WP_062863522.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| JFX80_RS06965 (1383966) | 1383966..1384604 | - | 639 | WP_000191701.1 | HTH-type transcriptional regulator RutR | - |
| JFX80_RS06970 (1384892) | 1384892..1385983 | + | 1092 | WP_001367989.1 | pyrimidine utilization protein A | - |
| JFX80_RS06975 (1385983) | 1385983..1386675 | + | 693 | WP_001307708.1 | peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | - |
| JFX80_RS06980 (1386687) | 1386687..1387073 | + | 387 | WP_001126777.1 | 3-aminoacrylate deaminase | - |
| JFX80_RS06985 (1387081) | 1387081..1387881 | + | 801 | WP_001345413.1 | pyrimidine utilization protein D | - |
| JFX80_RS06990 (1387891) | 1387891..1388481 | + | 591 | WP_001001171.1 | malonic semialdehyde reductase | - |
| JFX80_RS06995 (1388492) | 1388492..1388986 | + | 495 | WP_001028095.1 | pyrimidine utilization flavin reductase protein F | - |
| JFX80_RS07000 (1389007) | 1389007..1390335 | + | 1329 | WP_001240631.1 | pyrimidine utilization transport protein G | - |
| JFX80_RS07005 (1390418) | 1390418..1390591 | - | 174 | WP_001273658.1 | general stress protein | - |
| JFX80_RS07010 (1391360) | 1391360..1391433 | + | 74 | Protein_1387 | Hok/Gef family protein | - |
| JFX80_RS07015 (1391522) | 1391522..1399864 | - | 8343 | WP_215744907.1 | LPD5 domain-containing protein | - |
| JFX80_RS07020 (1399934) | 1399934..1401199 | - | 1266 | WP_000012443.1 | hypothetical protein | - |
| JFX80_RS07025 (1401210) | 1401210..1401482 | - | 273 | WP_000540399.1 | hypothetical protein | - |
| JFX80_RS07030 (1401492) | 1401492..1401938 | - | 447 | WP_032308635.1 | hypothetical protein | - |
| JFX80_RS07035 (1401941) | 1401941..1402596 | - | 656 | Protein_1392 | hypothetical protein | - |
| JFX80_RS07040 (1402693) | 1402693..1403046 | - | 354 | WP_001380385.1 | hypothetical protein | - |
| JFX80_RS07045 (1403179) | 1403179..1404390 | - | 1212 | WP_000710194.1 | YadA-like family protein | - |
| JFX80_RS07050 (1404742) | 1404742..1404882 | - | 141 | WP_000078907.1 | Hok/Gef family protein | - |
| JFX80_RS07055 (1405114) | 1405114..1405848 | - | 735 | WP_000835363.1 | Attachment invasion locus protein | VF |
| JFX80_RS07060 (1405939) | 1405939..1406556 | - | 618 | WP_001301884.1 | hypothetical protein | - |
| JFX80_RS07065 (1406562) | 1406562..1406840 | - | 279 | WP_000455635.1 | hypothetical protein | - |
| JFX80_RS07070 (1406855) | 1406855..1408123 | - | 1269 | WP_000197192.1 | DUF1983 domain-containing protein | - |
| JFX80_RS07075 (1408120) | 1408120..1409745 | - | 1626 | WP_024199968.1 | hypothetical protein | - |
| JFX80_RS07080 (1410283) | 1410283..1410957 | - | 675 | WP_106888818.1 | DUF4376 domain-containing protein | - |
| JFX80_RS07085 (1410954) | 1410954..1411178 | - | 225 | WP_001367204.1 | hypothetical protein | - |
| JFX80_RS07090 (1411188) | 1411188..1413224 | - | 2037 | WP_106904485.1 | ISNCY family transposase KIS | Transposase |
| JFX80_RS07095 (1413221) | 1413221..1413870 | - | 650 | Protein_1404 | hypothetical protein | - |
| JFX80_RS07100 (1413870) | 1413870..1414432 | - | 563 | Protein_1405 | hypothetical protein | - |
| JFX80_RS07105 (1414416) | 1414416..1414877 | - | 462 | WP_001367376.1 | hypothetical protein | - |
| JFX80_RS07110 (1414927) | 1414927..1415316 | - | 390 | WP_001140442.1 | hypothetical protein | - |
| JFX80_RS07115 (1415371) | 1415371..1416576 | - | 1206 | Protein_1408 | N4-gp56 family major capsid protein | - |
| JFX80_RS27230 (1416600) | 1416600..1417604 | - | 1005 | Protein_1409 | hypothetical protein | - |
| JFX80_RS07130 (1417761) | 1417761..1419903 | - | 2143 | Protein_1410 | portal protein | - |
| JFX80_RS07135 (1419903) | 1419903..1421609 | - | 1707 | WP_198788110.1 | terminase | - |
| JFX80_RS07140 (1421590) | 1421590..1421886 | - | 297 | Protein_1412 | terminase | - |
| JFX80_RS07145 (1422014) | 1422014..1422751 | - | 738 | WP_000528256.1 | hypothetical protein | - |
| JFX80_RS07150 (1422705) | 1422705..1422905 | - | 201 | WP_001443803.1 | Com family DNA-binding transcriptional regulator | - |
| JFX80_RS07155 (1423020) | 1423020..1423481 | + | 462 | Protein_1415 | hypothetical protein | - |
| JFX80_RS07160 (1423520) | 1423520..1423765 | - | 246 | WP_001114107.1 | DUF826 domain-containing protein | - |
| JFX80_RS07165 (1423801) | 1423801..1423980 | - | 180 | WP_000221106.1 | DUF1378 family protein | - |
| JFX80_RS07170 (1424038) | 1424038..1426095 | - | 2058 | WP_052067829.1 | sialate O-acetylesterase | - |
| JFX80_RS07175 (1426186) | 1426186..1426746 | - | 561 | WP_000904930.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| JFX80_RS07180 (1427302) | 1427302..1427823 | + | 522 | WP_024175235.1 | tail fiber assembly protein | - |
| JFX80_RS07185 (1427858) | 1427858..1428769 | - | 912 | WP_000469163.1 | hypothetical protein | - |
| JFX80_RS07190 (1428769) | 1428769..1429329 | - | 561 | WP_000301578.1 | YmfQ family protein | - |
| JFX80_RS07195 (1429320) | 1429320..1430402 | - | 1083 | WP_001146835.1 | baseplate J/gp47 family protein | - |
| JFX80_RS07200 (1430402) | 1430402..1430839 | - | 438 | WP_000763330.1 | phage GP46 family protein | - |
| JFX80_RS07205 (1430832) | 1430832..1431446 | - | 615 | WP_000980532.1 | phage baseplate assembly protein V | - |
| JFX80_RS07210 (1431436) | 1431436..1432560 | - | 1125 | WP_000098808.1 | hypothetical protein | - |
| JFX80_RS07215 (1432544) | 1432544..1433893 | - | 1350 | WP_000146118.1 | DNA circularization protein | - |
| JFX80_RS07220 (1433880) | 1433880..1435955 | - | 2076 | WP_000113523.1 | tape measure protein | - |
| JFX80_RS07225 (1436082) | 1436082..1436558 | - | 477 | WP_000213225.1 | phage tail assembly protein | - |
| JFX80_RS07230 (1436573) | 1436573..1436938 | - | 366 | WP_000015473.1 | phage tail tube protein | - |
| JFX80_RS07235 (1436947) | 1436947..1438449 | - | 1503 | WP_000606748.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| JFX80_RS07240 (1438446) | 1438446..1438691 | - | 246 | WP_000848437.1 | DUF2635 domain-containing protein | - |
| JFX80_RS07245 (1438692) | 1438692..1439252 | - | 561 | WP_044723556.1 | DUF1834 family protein | - |
| JFX80_RS07250 (1439249) | 1439249..1439668 | - | 420 | WP_001104959.1 | gp436 family protein | - |
| JFX80_RS07255 (1439665) | 1439665..1440060 | - | 396 | WP_024017777.1 | HI1506-related protein | - |
| JFX80_RS07260 (1440104) | 1440104..1441051 | - | 948 | WP_001142982.1 | Mu-like prophage major head subunit gpT family protein | - |
| JFX80_RS07265 (1441051) | 1441051..1442175 | - | 1125 | WP_000850816.1 | phage protease | - |
| JFX80_RS07270 (1442352) | 1442352..1442825 | - | 474 | WP_000094813.1 | phage virion morphogenesis protein | - |
| JFX80_RS07280 (1442947) | 1442947..1444278 | - | 1332 | WP_033805801.1 | phage head morphogenesis protein | - |
| JFX80_RS07285 (1444262) | 1444262..1445851 | - | 1590 | WP_044723563.1 | DUF935 family protein | - |
| JFX80_RS07290 (1445851) | 1445851..1447515 | - | 1665 | WP_001057670.1 | hypothetical protein | - |
| JFX80_RS07295 (1447515) | 1447515..1448096 | - | 582 | WP_000360581.1 | DUF3486 family protein | - |
| JFX80_RS07300 (1448099) | 1448099..1448389 | - | 291 | WP_001279079.1 | hypothetical protein | - |
| JFX80_RS07305 (1448386) | 1448386..1448694 | - | 309 | WP_000270159.1 | DUF2730 family protein | - |
| JFX80_RS07310 (1448675) | 1448675..1448902 | - | 228 | WP_000342749.1 | TraR/DksA family transcriptional regulator | - |
| JFX80_RS07315 (1448913) | 1448913..1449155 | - | 243 | WP_000878401.1 | hypothetical protein | - |
| JFX80_RS07320 (1449115) | 1449115..1449543 | - | 429 | WP_115801859.1 | endopeptidase | - |
| JFX80_RS07325 (1449578) | 1449578..1450078 | - | 501 | WP_001125304.1 | lysozyme | - |
| JFX80_RS07330 (1450150) | 1450150..1450575 | - | 426 | WP_000852377.1 | Mor transcription activator family protein | - |
| JFX80_RS07335 (1450645) | 1450645..1451154 | - | 510 | WP_001214359.1 | gp16 family protein | - |
| JFX80_RS07340 (1451151) | 1451151..1451447 | - | 297 | WP_000370523.1 | hypothetical protein | - |
| JFX80_RS07345 (1451437) | 1451437..1451634 | - | 198 | WP_001086882.1 | hypothetical protein | - |
| JFX80_RS07350 (1451627) | 1451627..1451959 | - | 333 | WP_000021231.1 | hypothetical protein | - |
| JFX80_RS07355 (1451998) | 1451998..1452183 | - | 186 | WP_000595948.1 | hypothetical protein | - |
| JFX80_RS07360 (1452180) | 1452180..1452731 | - | 552 | WP_000973021.1 | DNA-binding protein | - |
| JFX80_RS07365 (1452735) | 1452735..1453250 | - | 516 | WP_000465562.1 | hypothetical protein | - |
| JFX80_RS07370 (1453250) | 1453250..1453783 | - | 534 | WP_000564281.1 | hypothetical protein | - |
| JFX80_RS07375 (1453787) | 1453787..1454329 | - | 543 | WP_000323221.1 | hypothetical protein | - |
| JFX80_RS07380 (1454427) | 1454427..1454957 | - | 531 | WP_001129553.1 | host-nuclease inhibitor Gam family protein | - |
| JFX80_RS07385 (1454969) | 1454969..1455262 | - | 294 | WP_000049304.1 | hypothetical protein | - |
| JFX80_RS07390 (1455267) | 1455267..1455539 | - | 273 | WP_000049432.1 | hypothetical protein | - |
| JFX80_RS07395 (1455536) | 1455536..1455817 | - | 282 | WP_000739863.1 | hypothetical protein | - |
| JFX80_RS07400 (1455819) | 1455819..1456073 | - | 255 | WP_001057199.1 | hypothetical protein | - |
| JFX80_RS07405 (1456086) | 1456086..1456307 | - | 222 | WP_000257930.1 | hypothetical protein | - |
| JFX80_RS07410 (1456310) | 1456310..1457242 | - | 933 | WP_000129790.1 | AAA family ATPase | - |
| JFX80_RS07415 (1457314) | 1457314..1459404 | - | 2091 | WP_044723559.1 | IS3 family transposase ISCc3 | Transposase |
| JFX80_RS07420 (1459406) | 1459406..1459654 | - | 249 | WP_001310454.1 | helix-turn-helix domain-containing protein | - |
| JFX80_RS07425 (1459822) | 1459822..1460406 | + | 585 | WP_001056416.1 | hypothetical protein | - |
| JFX80_RS07430 (1460677) | 1460677..1461192 | - | 516 | Protein_1469 | terminase | - |
| JFX80_RS07435 (1461601) | 1461601..1461975 | - | 375 | WP_000999684.1 | Gp49 family protein | - |
| JFX80_RS07440 (1462201) | 1462201..1462458 | - | 258 | WP_001283921.1 | hypothetical protein | - |
| JFX80_RS07445 (1462455) | 1462455..1462952 | - | 498 | WP_000644480.1 | KilA-N domain-containing protein | - |
| JFX80_RS07450 (1463151) | 1463151..1463588 | - | 438 | WP_001368309.1 | lysis protein | - |
| JFX80_RS07455 (1463596) | 1463596..1463745 | - | 150 | WP_000455406.1 | hypothetical protein | - |
| JFX80_RS07460 (1463745) | 1463745..1464317 | - | 573 | WP_001056878.1 | phage antirepressor N-terminal domain-containing protein | - |
| JFX80_RS07465 (1464592) | 1464592..1465125 | - | 534 | WP_000087455.1 | lysozyme | - |
| JFX80_RS07470 (1465130) | 1465130..1465345 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| JFX80_RS07475 (1465423) | 1465423..1465668 | - | 246 | WP_001368314.1 | DUF826 domain-containing protein | - |
| JFX80_RS07480 (1465709) | 1465709..1465888 | - | 180 | WP_000143459.1 | DUF1378 family protein | - |
| JFX80_RS07485 (1466024) | 1466024..1467964 | - | 1941 | WP_000874412.1 | SASA family carbohydrate esterase | - |
| JFX80_RS07490 (1468469) | 1468469..1468738 | - | 270 | WP_000752026.1 | Shiga toxin subunit B | VF |
| JFX80_RS07495 (1468748) | 1468748..1469695 | - | 948 | WP_001368310.1 | Shiga toxin subunit A | VF |
| JFX80_RS07500 (1470202) | 1470202..1470636 | - | 435 | WP_001204859.1 | antiterminator Q family protein | - |
| JFX80_RS07505 (1470629) | 1470629..1470823 | - | 195 | WP_000144767.1 | phage NinH family protein | - |
| JFX80_RS07510 (1470820) | 1470820..1471383 | - | 564 | WP_000813672.1 | recombination protein NinG | - |
| JFX80_RS07515 (1471391) | 1471391..1471840 | - | 450 | WP_000402094.1 | DUF1367 family protein | - |
| JFX80_RS07520 (1471840) | 1471840..1472811 | - | 972 | WP_001193568.1 | primase-helicase zinc-binding domain-containing protein | - |
| JFX80_RS07525 (1472801) | 1472801..1474321 | - | 1521 | WP_000913118.1 | DEAD/DEAH box helicase | - |
| JFX80_RS07530 (1474315) | 1474315..1474692 | - | 378 | WP_001271433.1 | hypothetical protein | - |
| JFX80_RS27235 (1474900) | 1474900..1475169 | - | 270 | WP_001115081.1 | hypothetical protein | - |
| JFX80_RS07540 (1475224) | 1475224..1475427 | - | 204 | WP_001240876.1 | Cro/CI family transcriptional regulator | - |
| JFX80_RS07545 (1475523) | 1475523..1476236 | + | 714 | WP_001056249.1 | LexA family transcriptional regulator | - |
| JFX80_RS07550 (1476333) | 1476333..1476494 | + | 162 | WP_071525586.1 | transmembrane anchored protein | - |
| JFX80_RS07555 (1476674) | 1476674..1477576 | + | 903 | WP_000081325.1 | serine dehydrogenasease | - |
| JFX80_RS07560 (1477577) | 1477577..1477747 | + | 171 | WP_167580584.1 | hypothetical protein | - |
| JFX80_RS07565 (1477864) | 1477864..1478208 | - | 345 | WP_000681611.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JFX80_RS07570 (1478205) | 1478205..1478453 | - | 249 | WP_000513533.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JFX80_RS07575 (1479217) | 1479217..1479987 | + | 771 | WP_000529245.1 | Rha family transcriptional regulator | - |
| JFX80_RS07580 (1480058) | 1480058..1480270 | + | 213 | WP_000917251.1 | hypothetical protein | - |
| JFX80_RS07585 (1480282) | 1480282..1480563 | + | 282 | WP_000934192.1 | hypothetical protein | - |
| JFX80_RS07590 (1480584) | 1480584..1480865 | + | 282 | WP_000995348.1 | host nuclease inhibitor GamL | - |
| JFX80_RS07595 (1480883) | 1480883..1480966 | + | 84 | Protein_1502 | recombinase RecT | - |
| JFX80_RS07600 (1481023) | 1481023..1481720 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| JFX80_RS07605 (1481804) | 1481804..1482088 | + | 285 | WP_001208773.1 | excisionase family protein | - |
| JFX80_RS07610 (1482141) | 1482141..1483451 | + | 1311 | WP_001368133.1 | Putative defective protein IntQ ; Integrase | Integrase |
| JFX80_RS07615 (1483448) | 1483448..1484026 | + | 579 | WP_000607019.1 | NAD(P)H:quinone oxidoreductase | - |
| JFX80_RS07620 (1484047) | 1484047..1484274 | + | 228 | WP_001143120.1 | YccJ family protein | - |
| JFX80_RS07625 (1484312) | 1484312..1485553 | - | 1242 | WP_001044314.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| JFX80_RS07630 (1485847) | 1485847..1486535 | - | 689 | Protein_1509 | hypothetical protein | - |
| JFX80_RS07640 (1487301) | 1487301..1487879 | - | 579 | Protein_1511 | hypothetical protein | - |
| JFX80_RS07645 (1488140) | 1488140..1489060 | + | 921 | WP_000420617.1 | curved DNA-binding protein | - |
| JFX80_RS07650 (1489060) | 1489060..1489365 | + | 306 | WP_000024560.1 | chaperone modulator CbpM | - |
| JFX80_RS07655 (1489458) | 1489458..1490057 | - | 600 | WP_000209869.1 | molecular chaperone TorD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|