MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 136430 bp
Accession: NZ_CP075627 Location: 3877048..4013477 Organism: Escherichia coli strain P15-385 Replicon: chromosome
Accession: NZ_CP075627 Location: 3877048..4013477 Organism: Escherichia coli strain P15-385 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX93_RS18840 (3872350) | 3872350..3873090 | - | 741 | WP_001367953.1 | outer membrane beta-barrel protein | - |
| JFX93_RS18845 (3873478) | 3873478..3875304 | + | 1827 | WP_001106664.1 | two-component system sensor histidine kinase AtoS | - |
| JFX93_RS18850 (3875301) | 3875301..3876686 | + | 1386 | WP_000125284.1 | acetoacetate metabolism transcriptional regulator AtoC | - |
| JFX93_RS18855 (3876882) | 3876882..3877544 | + | 663 | WP_000850528.1 | acetate CoA-transferase subunit alpha | - |
| JFX93_RS18860 (3877544) | 3877544..3878194 | + | 651 | WP_000339054.1 | acetate CoA-transferase subunit beta | - |
| JFX93_RS18865 (3878191) | 3878191..3879513 | + | 1323 | WP_000580275.1 | TIGR00366 family protein | - |
| JFX93_RS18870 (3879544) | 3879544..3880728 | + | 1185 | WP_000786522.1 | acetyl-CoA acetyltransferase | - |
| JFX93_RS18875 (3881138) | 3881138..3881791 | - | 654 | Protein_3692 | IS66 family transposase ISEc23 | Transposase |
| JFX93_RS25435 (3882062) | 3882062..3882300 | + | 239 | Protein_3693 | IS66 family insertion sequence element accessory protein TnpB | - |
| JFX93_RS18885 (3883114) | 3883114..3883307 | + | 194 | Protein_3694 | hypothetical protein | - |
| JFX93_RS25440 (3883620) | 3883620..3884016 | + | 397 | Protein_3695 | DDE-type integrase/transposase/recombinase | - |
| JFX93_RS18890 (3884138) | 3884138..3884474 | - | 337 | Protein_3696 | hypothetical protein | - |
| JFX93_RS18895 (3885166) | 3885166..3885381 | - | 216 | Protein_3697 | hypothetical protein | - |
| JFX93_RS18900 (3886835) | 3886835..3888922 | + | 2088 | WP_001223358.1 | bifunctional siderophore receptor/adhesin Iha | - |
| JFX93_RS18905 (3889063) | 3889063..3889254 | - | 192 | Protein_3699 | IS256 family transposase ISEic2 | Transposase |
| JFX93_RS18910 (3889268) | 3889268..3891112 | - | 1845 | WP_000593011.1 | Vitamin B12 transporter BtuB | VF |
| JFX93_RS18915 (3892013) | 3892013..3892270 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| JFX93_RS18920 (3892339) | 3892339..3894025 | - | 1687 | Protein_3702 | sulfatase | - |
| JFX93_RS18925 (3894120) | 3894120..3895256 | - | 1137 | WP_001228923.1 | hypothetical protein | VF |
| JFX93_RS18930 (3895933) | 3895933..3896141 | + | 209 | Protein_3704 | IS66 family insertion sequence element accessory protein TnpB | - |
| JFX93_RS25445 (3896128) | 3896128..3896317 | + | 190 | Protein_3705 | IS66 family insertion sequence element accessory protein TnpB | - |
| JFX93_RS25450 (3896320) | 3896320..3896508 | - | 189 | WP_000520190.1 | DUF1187 family protein | - |
| JFX93_RS25455 (3897031) | 3897031..3897172 | + | 142 | Protein_3707 | IS481 family transposase | - |
| JFX93_RS18940 (3897394) | 3897394..3898131 | + | 738 | WP_198792977.1 | AraC family transcriptional regulator | - |
| JFX93_RS18945 (3899030) | 3899030..3903124 | + | 4095 | WP_001034012.1 | hypothetical protein | VF |
| JFX93_RS18950 (3903630) | 3903630..3903995 | + | 366 | WP_000997724.1 | hypothetical protein | - |
| JFX93_RS18955 (3904005) | 3904005..3904196 | + | 192 | WP_000264910.1 | hypothetical protein | - |
| JFX93_RS18960 (3904230) | 3904230..3904439 | + | 210 | WP_000323309.1 | hypothetical protein | - |
| JFX93_RS18965 (3904466) | 3904466..3904825 | - | 360 | Protein_3713 | IS66 family transposase ISCro1 | Transposase |
| JFX93_RS18970 (3904937) | 3904937..3905581 | - | 645 | WP_001376509.1 | hypothetical protein | - |
| JFX93_RS18975 (3905602) | 3905602..3905871 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| JFX93_RS18980 (3905950) | 3905950..3906588 | - | 639 | WP_000502848.1 | ParB N-terminal domain-containing protein | - |
| JFX93_RS18985 (3906573) | 3906573..3907805 | - | 1233 | WP_001285503.1 | phosphoadenosine phosphosulfate reductase | - |
| JFX93_RS18990 (3908305) | 3908305..3910986 | - | 2682 | WP_000256226.1 | AAA domain-containing protein | - |
| JFX93_RS18995 (3911227) | 3911227..3911407 | - | 181 | Protein_3719 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| JFX93_RS19000 (3911676) | 3911676..3912053 | - | 378 | WP_001367954.1 | hypothetical protein | VF |
| JFX93_RS25460 (3912108) | 3912108..3912412 | - | 305 | Protein_3721 | hypothetical protein | - |
| JFX93_RS19005 (3912478) | 3912478..3914223 | - | 1746 | WP_024177317.1 | 3'-5' exonuclease | - |
| JFX93_RS19010 (3914401) | 3914401..3914976 | - | 576 | WP_000742541.1 | hypothetical protein | VF |
| JFX93_RS25465 (3915157) | 3915157..3915519 | - | 363 | Protein_3724 | type VI secretion system baseplate subunit TssE | - |
| JFX93_RS19015 (3915520) | 3915520..3915834 | - | 315 | WP_000931686.1 | hypothetical protein | - |
| JFX93_RS19020 (3915938) | 3915938..3916174 | - | 237 | WP_000500956.1 | hypothetical protein | - |
| JFX93_RS19025 (3916161) | 3916161..3925274 | - | 9114 | WP_032306931.1 | hypothetical protein | VF |
| JFX93_RS19030 (3925290) | 3925290..3925817 | - | 528 | WP_001243916.1 | hypothetical protein | VF |
| JFX93_RS19035 (3925827) | 3925827..3926906 | - | 1080 | WP_223716279.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| JFX93_RS25470 (3926940) | 3926940..3927479 | - | 540 | Protein_3730 | POTRA domain-containing protein | - |
| JFX93_RS19040 (3928155) | 3928155..3928346 | + | 192 | WP_001287885.1 | DUF4222 domain-containing protein | - |
| JFX93_RS19045 (3928399) | 3928399..3928632 | - | 234 | WP_000124190.1 | hypothetical protein | - |
| JFX93_RS19050 (3928728) | 3928728..3929351 | - | 624 | WP_001367955.1 | hypothetical protein | - |
| JFX93_RS19055 (3929440) | 3929440..3929937 | - | 498 | WP_021552435.1 | hypothetical protein | - |
| JFX93_RS19060 (3930287) | 3930287..3930853 | - | 567 | WP_000287892.1 | inovirus-type Gp2 protein | - |
| JFX93_RS19065 (3930875) | 3930875..3931117 | - | 243 | WP_224065199.1 | inovirus-type Gp2 protein | - |
| JFX93_RS19070 (3931156) | 3931156..3932312 | + | 1157 | WP_099205956.1 | IS3 family transposase ISSd1 | Transposase |
| JFX93_RS19075 (3932586) | 3932586..3933011 | - | 426 | WP_001013311.1 | putative zinc ribbon protein | - |
| JFX93_RS19080 (3933008) | 3933008..3933391 | - | 384 | WP_000271013.1 | putative zinc ribbon protein | - |
| JFX93_RS19085 (3933652) | 3933652..3934221 | - | 570 | WP_000221481.1 | inovirus Gp2 family protein | - |
| JFX93_RS19090 (3934425) | 3934425..3934622 | + | 198 | WP_000236763.1 | hypothetical protein | - |
| JFX93_RS19095 (3934968) | 3934968..3935117 | - | 150 | WP_071528427.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| JFX93_RS19100 (3935869) | 3935869..3936075 | + | 207 | WP_000632607.1 | AlpA family transcriptional regulator | - |
| JFX93_RS19105 (3936156) | 3936156..3936446 | + | 291 | Protein_3744 | malate transporter | - |
| JFX93_RS19110 (3936519) | 3936519..3937696 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| JFX93_RS19115 (3937705) | 3937705..3938025 | + | 321 | Protein_3746 | hypothetical protein | - |
| JFX93_RS19120 (3938347) | 3938347..3939831 | - | 1485 | WP_001297234.1 | YfjI family protein | - |
| JFX93_RS19125 (3941061) | 3941061..3941933 | + | 873 | WP_001069680.1 | GTPase family protein | - |
| JFX93_RS19130 (3942261) | 3942261..3945380 | + | 3120 | WP_000820441.1 | autotransporter adhesin Ag43 | - |
| JFX93_RS19135 (3945501) | 3945501..3948017 | + | 2517 | WP_001367924.1 | hypothetical protein | - |
| JFX93_RS19140 (3948093) | 3948093..3948548 | + | 456 | WP_000581507.1 | IrmA family protein | - |
| JFX93_RS19145 (3948627) | 3948627..3948860 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| JFX93_RS19150 (3948960) | 3948960..3949778 | + | 819 | WP_001234626.1 | DUF932 domain-containing protein | - |
| JFX93_RS19155 (3949833) | 3949833..3950318 | + | 486 | WP_000849590.1 | antirestriction protein | - |
| JFX93_RS19160 (3950334) | 3950334..3950810 | + | 477 | WP_001186725.1 | RadC family protein | - |
| JFX93_RS19165 (3950873) | 3950873..3951094 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| JFX93_RS19170 (3951257) | 3951257..3951631 | + | 375 | WP_001280952.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JFX93_RS19175 (3951678) | 3951678..3952055 | + | 378 | WP_000854902.1 | TA system toxin CbtA family protein | Toxin Detail |
| JFX93_RS19180 (3952052) | 3952052..3952540 | + | 489 | WP_000779175.1 | DUF5983 family protein | - |
| JFX93_RS19185 (3952552) | 3952552..3952749 | + | 198 | WP_000839261.1 | DUF957 domain-containing protein | - |
| JFX93_RS19190 (3952834) | 3952834..3953676 | + | 843 | WP_001280537.1 | DUF4942 domain-containing protein | - |
| JFX93_RS19195 (3954019) | 3954019..3954555 | - | 537 | WP_000942798.1 | hypothetical protein | VF |
| JFX93_RS19200 (3954557) | 3954557..3955735 | - | 1179 | WP_000094987.1 | hypothetical protein | VF |
| JFX93_RS19205 (3955732) | 3955732..3956709 | - | 978 | WP_000633193.1 | hypothetical protein | VF |
| JFX93_RS19210 (3956706) | 3956706..3957311 | - | 606 | WP_001255041.1 | hypothetical protein | VF |
| JFX93_RS19215 (3957308) | 3957308..3957679 | - | 372 | WP_000820125.1 | hypothetical protein | VF |
| JFX93_RS19220 (3957676) | 3957676..3958239 | - | 564 | WP_001115140.1 | hypothetical protein | VF |
| JFX93_RS19225 (3958243) | 3958243..3958698 | - | 456 | WP_001087296.1 | hypothetical protein | VF |
| JFX93_RS19230 (3958715) | 3958715..3959938 | - | 1224 | WP_001173453.1 | hypothetical protein | VF |
| JFX93_RS19235 (3959938) | 3959938..3961431 | - | 1494 | WP_000249348.1 | hypothetical protein | VF |
| JFX93_RS19240 (3961431) | 3961431..3963491 | - | 2061 | WP_000498829.1 | hypothetical protein | VF |
| JFX93_RS19245 (3963521) | 3963521..3964480 | - | 960 | WP_000135063.1 | hypothetical protein | VF |
| JFX93_RS19250 (3964498) | 3964498..3964908 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| JFX93_RS19255 (3964974) | 3964974..3965783 | - | 810 | WP_001365924.1 | hypothetical protein | VF |
| JFX93_RS19260 (3965923) | 3965923..3970488 | - | 4566 | WP_001034497.1 | hypothetical protein | VF |
| JFX93_RS19265 (3970974) | 3970974..3972656 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| JFX93_RS19270 (3973012) | 3973012..3975183 | - | 2172 | Protein_3777 | malate synthase G | - |
| JFX93_RS19275 (3975205) | 3975205..3975609 | - | 405 | WP_000853256.1 | GlcG family protein | - |
| JFX93_RS19280 (3975614) | 3975614..3976837 | - | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| JFX93_RS19285 (3976848) | 3976848..3977900 | - | 1053 | WP_000943055.1 | glycolate oxidase subunit GlcE | - |
| JFX93_RS19290 (3977900) | 3977900..3979399 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| JFX93_RS19295 (3979649) | 3979649..3980413 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| JFX93_RS19300 (3980420) | 3980420..3981562 | - | 1143 | WP_001307394.1 | protein YghO | - |
| JFX93_RS19305 (3981933) | 3981933..3983654 | + | 1722 | WP_001390306.1 | 2-succinylbenzoate--CoA ligase | VF |
| JFX93_RS19310 (3983651) | 3983651..3984565 | + | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| JFX93_RS19315 (3984597) | 3984597..3984845 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| JFX93_RS19320 (3984845) | 3984845..3986017 | + | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| JFX93_RS19325 (3986052) | 3986052..3987131 | - | 1080 | WP_001307395.1 | LPS export ABC transporter permease LptG | - |
| JFX93_RS19330 (3987128) | 3987128..3988198 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| JFX93_RS19335 (3988229) | 3988229..3988789 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| JFX93_RS19340 (3988801) | 3988801..3989625 | - | 825 | WP_000984978.1 | hypothetical protein | - |
| JFX93_RS19345 (3989625) | 3989625..3990974 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| JFX93_RS19350 (3991020) | 3991020..3991787 | - | 768 | WP_000339540.1 | hypothetical protein | - |
| JFX93_RS19355 (3991819) | 3991819..3992532 | - | 714 | WP_001076097.1 | dTMP kinase | - |
| JFX93_RS19360 (3992706) | 3992706..3993398 | + | 693 | WP_001190780.1 | dTMP kinase | - |
| JFX93_RS19365 (3993447) | 3993447..3994946 | - | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| JFX93_RS19370 (3995238) | 3995238..3997097 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| JFX93_RS19375 (3997302) | 3997302..3998168 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| JFX93_RS19380 (3998468) | 3998468..3999448 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| JFX93_RS19385 (3999570) | 3999570..3999818 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| JFX93_RS19390 (3999831) | 3999831..4000172 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| JFX93_RS19395 (4000165) | 4000165..4000653 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| JFX93_RS19400 (4000646) | 4000646..4001140 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| JFX93_RS19405 (4001140) | 4001140..4002843 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| JFX93_RS19410 (4002840) | 4002840..4004018 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| JFX93_RS19415 (4004008) | 4004008..4004994 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| JFX93_RS19420 (4004997) | 4004997..4006115 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| JFX93_RS19425 (4006304) | 4006304..4006591 | - | 288 | WP_001059136.1 | DUF2623 family protein YghW | - |
| JFX93_RS19430 (4006710) | 4006710..4007597 | - | 888 | WP_001297303.1 | YghX family hydrolase | - |
| JFX93_RS19435 (4007754) | 4007754..4008794 | + | 1041 | WP_000262156.1 | L-glyceraldehyde 3-phosphate reductase | - |
| JFX93_RS19440 (4008834) | 4008834..4009328 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| JFX93_RS19445 (4009519) | 4009519..4010403 | + | 885 | WP_000018763.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| JFX93_RS19450 (4010562) | 4010562..4010987 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| JFX93_RS19455 (4010994) | 4010994..4011728 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| JFX93_RS19460 (4011980) | 4011980..4013167 | + | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| JFX93_RS19465 (4013307) | 4013307..4013966 | + | 660 | WP_000268419.1 | DedA family general envelope maintenance protein YghB | - |
| JFX93_RS19470 (4014006) | 4014006..4014905 | - | 900 | WP_001298382.1 | DNA-binding transcriptional regulator YqhC | - |
| JFX93_RS19475 (4015099) | 4015099..4016262 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| JFX93_RS19480 (4016367) | 4016367..4017194 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| JFX93_RS19485 (4017394) | 4017394..4018320 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|