MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP075627 Location: 276342..285692 Organism: Escherichia coli strain P15-385 Replicon: chromosome
Accession: NZ_CP075627 Location: 276342..285692 Organism: Escherichia coli strain P15-385 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX93_RS01225 (273074) | 273074..273793 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| JFX93_RS01230 (273790) | 273790..275421 | - | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| JFX93_RS01235 (275602) | 275602..275832 | + | 231 | WP_000371697.1 | 4Fe-4S mono-cluster protein YjdI | - |
| JFX93_RS01240 (275844) | 275844..276116 | + | 273 | WP_000405649.1 | GNAT family N-acetyltransferase | - |
| JFX93_RS01245 (276342) | 276342..276638 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JFX93_RS01250 (276666) | 276666..276839 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JFX93_RS01255 (276958) | 276958..278475 | - | 1518 | WP_001295088.1 | lysine--tRNA ligase | - |
| JFX93_RS01260 (278712) | 278712..280169 | - | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| JFX93_RS01265 (280228) | 280228..282375 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JFX93_RS01270 (282455) | 282455..283789 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JFX93_RS01275 (284154) | 284154..285692 | - | 1539 | WP_001187167.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JFX93_RS01285 (286491) | 286491..287066 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| JFX93_RS01290 (287103) | 287103..288800 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| JFX93_RS01295 (288776) | 288776..289114 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| JFX93_RS01300 (289230) | 289230..290531 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |