MGE detailed information
MGE type: Prophage MGE length: 40806 bp
Accession: NZ_CP075487 Location: 1943033..1983838 Organism: Escherichia coli strain NT1F34 Replicon: chromosome
Accession: NZ_CP075487 Location: 1943033..1983838 Organism: Escherichia coli strain NT1F34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI26_RS09910 () | 1939757..1940209 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| IGI26_RS09915 () | 1940238..1940978 | + | 741 | WP_000907248.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| IGI26_RS09920 () | 1941013..1941534 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| IGI26_RS09925 () | 1941536..1942138 | - | 603 | WP_001024932.1 | YebB family permuted papain-like enzyme | - |
| IGI26_RS09930 () | 1942209..1942274 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| IGI26_RS09935 () | 1942413..1943024 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| IGI26_RS09940 () | 1943033..1944043 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| IGI26_RS09945 () | 1944190..1944975 | - | 786 | WP_185229699.1 | hypothetical protein | VF |
| IGI26_RS09950 () | 1944972..1945727 | - | 756 | WP_000202996.1 | hypothetical protein | VF |
| IGI26_RS09955 () | 1945806..1946738 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| IGI26_RS09960 () | 1946754..1948076 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| IGI26_RS09965 () | 1948196..1949167 | + | 972 | WP_000448381.1 | hypothetical protein | VF |
| IGI26_RS09970 () | 1949256..1949795 | - | 540 | Protein_1829 | glycosyl hydrolase-related protein | - |
| IGI26_RS09975 () | 1949852..1950549 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| IGI26_RS09980 () | 1950576..1951052 | + | 477 | WP_225904513.1 | alpha/beta hydrolase-fold protein | - |
| IGI26_RS23705 () | 1951075..1951635 | + | 561 | WP_001424262.1 | Nif3-like dinuclear metal center hexameric protein | - |
| IGI26_RS23710 () | 1951661..1951915 | + | 255 | WP_241135515.1 | hypothetical protein | - |
| IGI26_RS09990 () | 1951975..1953417 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| IGI26_RS09995 () | 1953545..1954414 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| IGI26_RS10000 () | 1954752..1956227 | + | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| IGI26_RS10005 () | 1956462..1958273 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| IGI26_RS10010 () | 1958310..1958951 | + | 642 | WP_021526358.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| IGI26_RS10015 () | 1959007..1960185 | - | 1179 | WP_004016280.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| IGI26_RS10020 () | 1960319..1960609 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| IGI26_RS10025 () | 1960676..1961032 | + | 357 | WP_001295500.1 | protein YebF | - |
| IGI26_RS10030 () | 1961359..1962018 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| IGI26_RS10035 () | 1962227..1964287 | + | 2061 | WP_193115190.1 | oligopeptidase B | - |
| IGI26_RS10040 () | 1964284..1964946 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| IGI26_RS10045 () | 1964970..1965626 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein YobB | - |
| IGI26_RS10050 () | 1965728..1965958 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| IGI26_RS10055 () | 1966097..1966471 | + | 375 | WP_000255065.1 | CopC domain-containing protein YobA | - |
| IGI26_RS10060 () | 1966475..1967347 | + | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| IGI26_RS10065 () | 1967360..1967701 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 1967729..1968000 | - | 272 | - | - | Antitoxin Detail |
| - | 1967859..1967962 | + | 104 | - | - | Toxin Detail |
| IGI26_RS10070 () | 1968097..1968753 | + | 657 | WP_000812733.1 | protein-serine/threonine phosphatase | - |
| IGI26_RS10075 () | 1968754..1968945 | - | 192 | WP_001313035.1 | YebW family protein | - |
| IGI26_RS10080 () | 1969050..1969286 | - | 237 | WP_001295499.1 | YebV family protein | - |
| IGI26_RS10085 () | 1969404..1970843 | - | 1440 | WP_024176540.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| IGI26_RS10090 () | 1970923..1973556 | - | 2634 | WP_001297532.1 | hypothetical protein | VF |
| IGI26_RS10095 () | 1973525..1974808 | - | 1284 | WP_001301337.1 | membrane integrity lipid transport subunit YebS | - |
| IGI26_RS10100 () | 1974938..1975435 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| IGI26_RS10105 () | 1975532..1976230 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| IGI26_RS10110 () | 1976250..1978298 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| IGI26_RS10115 () | 1978490..1979371 | + | 882 | WP_000984517.1 | protease HtpX | - |
| IGI26_RS10120 () | 1979417..1980790 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| IGI26_RS10125 () | 1980967..1981758 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| IGI26_RS10130 () | 1981901..1982140 | - | 240 | WP_001211011.1 | YobH family protein | - |
| IGI26_RS10135 () | 1982299..1982442 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| IGI26_RS10140 () | 1982517..1982804 | + | 288 | WP_001006866.1 | YebO family protein | - |
| IGI26_RS10145 () | 1983473..1983616 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| IGI26_RS10150 () | 1983629..1983838 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| IGI26_RS10155 () | 1984004..1984813 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| IGI26_RS10160 () | 1984810..1985376 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| IGI26_RS10165 () | 1985805..1986263 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| IGI26_RS10170 () | 1986318..1987169 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| IGI26_RS10175 () | 1987182..1987982 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|