MGE detailed information
MGE type: Mobilizable plasmid MGE length: 115741 bp
Accession: NZ_CP075485 Location: 1..115741 Organism: Escherichia coli strain NT1N25 Replicon: plasmid pNT1N25-tetX4
Accession: NZ_CP075485 Location: 1..115741 Organism: Escherichia coli strain NT1N25 Replicon: plasmid pNT1N25-tetX4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI28_RS22780 | 145..1758 | + | 1614 | WP_136655509.1 | ATP-binding cassette domain-containing protein | - |
| IGI28_RS22785 | 1806..2435 | - | 630 | WP_136655510.1 | Chloramphenicol acetyltransferase | VF |
| IGI28_RS22790 | 2664..3113 | + | 450 | WP_166488538.1 | MarR family transcriptional regulator | - |
| IGI28_RS22795 | 3127..4491 | + | 1365 | Protein_3 | IS91-like element ISVsa3 family transposase | - |
| IGI28_RS23550 | 4522..5406 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| IGI28_RS22805 | 5623..6837 | + | 1215 | WP_034167813.1 | Inner membrane transport protein YdhC | ARG |
| IGI28_RS22810 | 6865..7170 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| IGI28_RS22815 | 7282..7935 | + | 654 | Protein_7 | IS91-like element ISVsa3 family transposase | - |
| IGI28_RS22820 | 7989..8693 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI28_RS22825 | 8759..9259 | + | 501 | Protein_9 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IGI28_RS22830 | 9317..9559 | + | 243 | WP_000844627.1 | transposase | - |
| IGI28_RS22835 | 9591..10241 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IGI28_RS22840 | 10347..11546 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| IGI28_RS22845 | 11578..12462 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| IGI28_RS22850 | 12600..12992 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| IGI28_RS22855 | 12996..13757 | + | 762 | Protein_15 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IGI28_RS22860 | 13793..16798 | - | 3006 | WP_001531602.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IGI28_RS22865 | 16962..17519 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IGI28_RS22870 | 17702..18562 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| IGI28_RS22875 | 18673..19167 | - | 495 | WP_077141251.1 | IS91 family transposase ISAzo26 | Transposase |
| IGI28_RS22880 | 19570..20202 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| IGI28_RS22885 | 20225..20455 | + | 231 | WP_136655701.1 | hypothetical protein | - |
| IGI28_RS22890 | 20463..20630 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| IGI28_RS22895 | 20749..22668 | - | 1920 | WP_025989258.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| IGI28_RS23595 | 22684..22800 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| IGI28_RS22905 | 23045..23512 | - | 468 | Protein_25 | conjugal transfer protein | - |
| IGI28_RS22910 | 23566..24099 | - | 534 | Protein_26 | IS6 family transposase IS26 | Transposase |
| IGI28_RS22915 | 24153..24857 | - | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| IGI28_RS22920 | 25018..25674 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| IGI28_RS22925 | 26065..26322 | - | 258 | Protein_29 | ISKra4 family transposase | - |
| IGI28_RS22930 | 26376..27080 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI28_RS22935 | 27347..28783 | + | 1437 | WP_000105383.1 | glutathione synthase | - |
| IGI28_RS22940 | 29118..29815 | + | 698 | WP_225528490.1 | IS1-like element IS1A family transposase | - |
| IGI28_RS22945 | 29840..30274 | - | 435 | WP_053273090.1 | hypothetical protein | - |
| IGI28_RS22950 | 30255..30338 | + | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| IGI28_RS22955 | 30493..31137 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IGI28_RS22960 | 31518..32180 | + | 663 | WP_000516402.1 | division plane positioning ATPase MipZ | - |
| IGI28_RS22965 | 32278..32559 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| IGI28_RS22970 | 32584..33561 | + | 978 | WP_024245156.1 | hypothetical protein | - |
| IGI28_RS22975 | 33558..33914 | - | 357 | WP_000456533.1 | DNA distortion polypeptide 3 | - |
| IGI28_RS22980 | 34051..34497 | - | 447 | Protein_40 | hypothetical protein | - |
| IGI28_RS22985 | 34537..35373 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| IGI28_RS22990 | 36607..36858 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| IGI28_RS22995 | 36848..37129 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IGI28_RS23000 | 37204..37901 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| IGI28_RS23005 | 38047..38304 | + | 258 | WP_105278499.1 | hypothetical protein | - |
| IGI28_RS23010 | 38341..39309 | - | 969 | WP_077783444.1 | IS5 family transposase IS903B | Transposase |
| IGI28_RS23015 | 39344..39619 | + | 276 | Protein_47 | peptidoglycan DD-metalloendopeptidase family protein | - |
| IGI28_RS23020 | 39653..39850 | - | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| IGI28_RS23025 | 39891..42368 | - | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| IGI28_RS23030 | 42466..42906 | - | 441 | WP_000758229.1 | DUF411 domain-containing protein | - |
| IGI28_RS23035 | 42993..46139 | - | 3147 | WP_020219104.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| IGI28_RS23040 | 46150..47442 | - | 1293 | WP_001381488.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| IGI28_RS23045 | 47556..47909 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| IGI28_RS23050 | 47937..49322 | - | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| IGI28_RS23055 | 49512..50192 | + | 681 | WP_000697969.1 | Transcriptional regulatory protein CusR | VF |
| IGI28_RS23060 | 50185..51660 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| IGI28_RS23065 | 51911..52342 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| IGI28_RS23070 | 52486..52836 | + | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| IGI28_RS23075 | 53224..54132 | - | 909 | Protein_59 | HNH endonuclease | - |
| IGI28_RS23080 | 54604..55832 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| IGI28_RS23085 | 56105..57079 | + | 975 | WP_001148756.1 | sensor domain-containing diguanylate cyclase | - |
| IGI28_RS23090 | 58009..58680 | + | 672 | WP_000796235.1 | hypothetical protein | - |
| IGI28_RS23095 | 58700..59488 | + | 789 | WP_022631000.1 | site-specific integrase | - |
| IGI28_RS23565 | 59546..59737 | - | 192 | WP_001326966.1 | hypothetical protein | - |
| IGI28_RS23100 | 59782..60675 | - | 894 | Protein_65 | IS3 family transposase ISEhe3 | Transposase |
| IGI28_RS23105 | 60688..61839 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| IGI28_RS23110 | 61921..62070 | - | 150 | Protein_67 | IS3 family transposase ISEhe3 | Transposase |
| IGI28_RS23115 | 62217..62498 | + | 282 | WP_000639434.1 | hypothetical protein | - |
| IGI28_RS23120 | 62599..63297 | - | 699 | Protein_69 | IS1 family transposase | - |
| IGI28_RS23125 | 63407..64732 | + | 1326 | WP_021512928.1 | reactive chlorine resistance oxidoreductase RclA | - |
| IGI28_RS23130 | 64939..65636 | + | 698 | WP_225902390.1 | IS1-like element IS1B family transposase | - |
| IGI28_RS23135 | 65666..66013 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| IGI28_RS23140 | 66062..67599 | + | 1538 | Protein_73 | IS66 family transposase ISEc22 | Transposase |
| IGI28_RS23145 | 69542..70240 | + | 699 | Protein_74 | IS1 family transposase | - |
| IGI28_RS23150 | 70259..71104 | + | 846 | Protein_75 | IS3 family transposase IS911 | Transposase |
| IGI28_RS23155 | 71556..72527 | - | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IGI28_RS23160 | 72527..73693 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| IGI28_RS23165 | 74434..75444 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| IGI28_RS23170 | 75638..76605 | + | 968 | Protein_79 | IS5 family transposase IS903B | Transposase |
| IGI28_RS23175 | 76772..77062 | - | 291 | WP_001471781.1 | hypothetical protein | - |
| IGI28_RS23180 | 77762..78097 | + | 336 | WP_001039462.1 | plasmid stabilization protein StbA | - |
| IGI28_RS23185 | 78106..78297 | + | 192 | WP_001515192.1 | hypothetical protein | - |
| IGI28_RS23190 | 78308..78891 | - | 584 | Protein_83 | IS1 family transposase IS1X4 | Transposase |
| IGI28_RS23195 | 79425..80180 | + | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| IGI28_RS23200 | 80449..80794 | + | 346 | Protein_85 | IS1 family transposase IS1X4 | Transposase |
| IGI28_RS23205 | 81305..81445 | + | 141 | WP_160784086.1 | hypothetical protein | - |
| IGI28_RS23210 | 81540..82244 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI28_RS23215 | 82297..83037 | + | 741 | Protein_88 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IGI28_RS23220 | 83070..83504 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| IGI28_RS23225 | 83576..83926 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| IGI28_RS23230 | 83940..84215 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| IGI28_RS23235 | 84251..84673 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| IGI28_RS23240 | 84725..86419 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| IGI28_RS23245 | 86437..86628 | + | 192 | Protein_94 | mercuric resistance transcriptional repressor protein MerD | - |
| IGI28_RS23250 | 86692..87396 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IGI28_RS23255 | 87524..88753 | + | 1230 | WP_032492336.1 | Putative bacilysin exporter BacE | ARG |
| IGI28_RS23260 | 88899..89762 | + | 864 | WP_054377175.1 | SDR family oxidoreductase | - |
| IGI28_RS23265 | 89800..90045 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| IGI28_RS23270 | 90514..91305 | + | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| IGI28_RS23275 | 91308..91583 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| IGI28_RS23280 | 91606..92238 | + | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| IGI28_RS23285 | 92485..92610 | - | 126 | Protein_102 | quaternary ammonium compound efflux SMR transporter QacL | - |
| IGI28_RS23290 | 92663..93367 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI28_RS23295 | 93513..94526 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| IGI28_RS23300 | 94682..95155 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| IGI28_RS23305 | 95339..95431 | + | 93 | Protein_106 | SMR family transporter | - |
| IGI28_RS23310 | 95484..96188 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI28_RS23315 | 96253..97098 | + | 846 | Protein_108 | IS91-like element ISVsa3 family transposase | - |
| IGI28_RS23320 | 97880..98725 | + | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
| IGI28_RS23325 | 98715..99872 | + | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI28_RS23330 | 100211..101704 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| IGI28_RS23335 | 102486..103332 | + | 847 | Protein_112 | alpha/beta hydrolase | - |
| IGI28_RS23340 | 103322..104479 | + | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI28_RS23345 | 104818..106311 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| IGI28_RS23350 | 107093..107938 | + | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
| IGI28_RS23355 | 107928..109085 | + | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI28_RS23360 | 109424..110917 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| IGI28_RS23365 | 111699..112544 | + | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
| IGI28_RS23370 | 112534..113691 | + | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI28_RS23375 | 114030..115523 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|