MGE detailed information
MGE type: Genomic_island MGE length: 13067 bp
Accession: NZ_CP075484 Location: 595201..608267 Organism: Escherichia coli strain NT1N25 Replicon: chromosome
Accession: NZ_CP075484 Location: 595201..608267 Organism: Escherichia coli strain NT1N25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI28_RS03370 (590202) | 590202..590636 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| IGI28_RS03375 (590654) | 590654..591532 | - | 879 | WP_001298758.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| IGI28_RS03380 (591522) | 591522..592301 | - | 780 | WP_166488258.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| IGI28_RS03385 (592312) | 592312..592785 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IGI28_RS03390 (592808) | 592808..594088 | - | 1281 | WP_000681947.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| IGI28_RS03395 (594337) | 594337..595146 | + | 810 | WP_000072180.1 | aga operon transcriptional regulator AgaR | - |
| IGI28_RS03400 (595201) | 595201..595665 | - | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| IGI28_RS03405 (595665) | 595665..596000 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| IGI28_RS03410 (596149) | 596149..597720 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| IGI28_RS03415 (598095) | 598095..599429 | + | 1335 | Protein_575 | galactarate/glucarate/glycerate transporter GarP | - |
| IGI28_RS03420 (599445) | 599445..600215 | + | 771 | WP_166488256.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| IGI28_RS03425 (600245) | 600245..601135 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| IGI28_RS03430 (601232) | 601232..602377 | + | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| IGI28_RS03440 (603474) | 603474..604454 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| IGI28_RS03445 (604792) | 604792..605979 | - | 1188 | WP_000484603.1 | YhaC family protein | - |
| IGI28_RS03450 (606001) | 606001..606540 | - | 540 | WP_000675746.1 | protein YhaB | - |
| IGI28_RS03455 (606796) | 606796..607014 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| IGI28_RS03460 (607329) | 607329..608267 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| IGI28_RS03465 (608366) | 608366..609355 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| IGI28_RS03470 (609377) | 609377..610708 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| IGI28_RS03475 (610734) | 610734..611942 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|