MGE detailed information
MGE type: Genomic_island MGE length: 11526 bp
Accession: NZ_CP075484 Location: 3657237..3668762 Organism: Escherichia coli strain NT1N25 Replicon: chromosome
Accession: NZ_CP075484 Location: 3657237..3668762 Organism: Escherichia coli strain NT1N25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI28_RS17975 (3652817) | 3652817..3653269 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| IGI28_RS17980 (3653266) | 3653266..3654321 | - | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| IGI28_RS17985 (3654392) | 3654392..3655177 | - | 786 | WP_000207590.1 | putative lateral flagellar export/assembly protein LafU | - |
| IGI28_RS17990 (3655149) | 3655149..3656861 | + | 1713 | Protein_3442 | flagellar biosynthesis protein FlhA | - |
| IGI28_RS17995 (3656966) | 3656966..3657244 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| IGI28_RS18000 (3657237) | 3657237..3657593 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| IGI28_RS18005 (3657650) | 3657650..3658423 | - | 774 | WP_000543895.1 | Murein DD-endopeptidase MepH | VF |
| IGI28_RS18010 (3658609) | 3658609..3658869 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| IGI28_RS18015 (3658872) | 3658872..3659150 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| IGI28_RS18020 (3659306) | 3659306..3660046 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| IGI28_RS18025 (3660017) | 3660017..3660784 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| IGI28_RS18030 (3660990) | 3660990..3661568 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| IGI28_RS18035 (3661808) | 3661808..3664252 | + | 2445 | WP_000973094.1 | Acyl-coenzyme A dehydrogenase | VF |
| IGI28_RS18040 (3664295) | 3664295..3664741 | - | 447 | WP_025653229.1 | Ivy family C-type lysozyme inhibitor | - |
| IGI28_RS18045 (3664922) | 3664922..3665692 | + | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| IGI28_RS18050 (3665734) | 3665734..3666870 | - | 1137 | Protein_3454 | ISAs1 family transposase ISEc1 | Transposase |
| IGI28_RS18055 (3666973) | 3666973..3668099 | - | 1127 | Protein_3455 | ISAs1 family transposase ISEc26 | Transposase |
| IGI28_RS18060 (3668180) | 3668180..3668365 | + | 186 | WP_122985282.1 | hypothetical protein | - |
| IGI28_RS23665 (3668280) | 3668280..3668762 | - | 483 | WP_000939262.1 | protein YdcD | - |
| IGI28_RS18070 (3668746) | 3668746..3672785 | - | 4040 | Protein_3458 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|