MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108720 bp
Accession: NZ_CP075475 Location: 1..108720 Organism: Escherichia coli strain NT1N28 Replicon: plasmid pNT1N28-108k
Accession: NZ_CP075475 Location: 1..108720 Organism: Escherichia coli strain NT1N28 Replicon: plasmid pNT1N28-108k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI29_RS22910 | 1..1056 | + | 1056 | WP_001711119.1 | replication protein RepA | - |
| IGI29_RS22915 | 1666..1878 | - | 213 | WP_001711118.1 | hypothetical protein | - |
| IGI29_RS22920 | 1878..2213 | - | 336 | WP_023135694.1 | hypothetical protein | - |
| IGI29_RS22925 | 2210..2389 | - | 180 | WP_089591465.1 | hypothetical protein | - |
| IGI29_RS22930 | 2429..2704 | - | 276 | WP_023135696.1 | hypothetical protein | - |
| IGI29_RS22935 | 2885..3193 | - | 309 | Protein_5 | integrase core domain-containing protein | - |
| IGI29_RS22940 | 3210..4286 | - | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| IGI29_RS22945 | 4568..4891 | - | 324 | Protein_7 | IS3 family transposase IS911 | Transposase |
| IGI29_RS22950 | 4960..7977 | - | 3018 | WP_094338074.1 | type I restriction endonuclease subunit R | - |
| IGI29_RS22955 | 7992..9155 | - | 1164 | WP_063085660.1 | DUF4268 domain-containing protein | - |
| IGI29_RS22960 | 9165..10478 | - | 1314 | WP_112923079.1 | restriction endonuclease subunit S | - |
| IGI29_RS22965 | 10485..12908 | - | 2424 | WP_063122721.1 | class I SAM-dependent DNA methyltransferase | - |
| IGI29_RS22970 | 13153..13332 | - | 180 | Protein_12 | SPFH/Band 7/PHB domain protein | - |
| IGI29_RS22975 | 13336..13536 | - | 201 | WP_001711109.1 | membrane protein | - |
| IGI29_RS22980 | 13627..15966 | - | 2340 | WP_193115170.1 | LAGLIDADG family homing endonuclease | - |
| IGI29_RS22985 | 15969..16235 | - | 267 | WP_000920226.1 | hypothetical protein | - |
| IGI29_RS22990 | 16235..17179 | - | 945 | WP_023135728.1 | 5'-3' exonuclease H3TH domain-containing protein | - |
| IGI29_RS22995 | 17240..18256 | - | 1017 | WP_193115169.1 | regulator | - |
| IGI29_RS23000 | 18376..18807 | - | 432 | WP_031614943.1 | hypothetical protein | - |
| IGI29_RS23005 | 19064..19300 | + | 237 | WP_016051660.1 | hypothetical protein | - |
| IGI29_RS23010 | 19353..19931 | + | 579 | WP_016051659.1 | phage transcriptional regulator AlpA-like protein | - |
| IGI29_RS23015 | 19962..23468 | - | 3507 | WP_193115168.1 | DNA polymerase III subunit alpha | - |
| IGI29_RS23020 | 23649..24884 | - | 1236 | WP_023135733.1 | AAA family ATPase | - |
| IGI29_RS23025 | 24980..27325 | - | 2346 | WP_193115167.1 | porphyrin biosynthesis protein | - |
| IGI29_RS23030 | 27438..27650 | - | 213 | WP_193115166.1 | hypothetical protein | - |
| IGI29_RS23035 | 27905..28294 | + | 390 | WP_193115165.1 | XRE family transcriptional regulator | - |
| IGI29_RS23040 | 28289..29392 | - | 1104 | WP_193115164.1 | site-specific integrase | - |
| IGI29_RS23045 | 29693..30187 | - | 495 | WP_225904520.1 | hypothetical protein | - |
| IGI29_RS23055 | 31280..31585 | - | 306 | WP_023135645.1 | hypothetical protein | - |
| IGI29_RS23060 | 31734..31946 | - | 213 | WP_063085636.1 | hypothetical protein | - |
| IGI29_RS23665 | 31930..32106 | - | 177 | WP_031614921.1 | hypothetical protein | - |
| IGI29_RS23065 | 32106..33428 | - | 1323 | WP_193115162.1 | DNA ligase | - |
| IGI29_RS23070 | 33463..33939 | - | 477 | WP_193115161.1 | hypothetical protein | - |
| IGI29_RS23075 | 34021..34833 | - | 813 | WP_193115160.1 | hypothetical protein | - |
| IGI29_RS23080 | 34915..36030 | - | 1116 | WP_193115159.1 | DNA primase | - |
| IGI29_RS23085 | 36186..37526 | - | 1341 | WP_033545989.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| IGI29_RS23090 | 37587..38312 | - | 726 | WP_193115158.1 | hypothetical protein | - |
| IGI29_RS23095 | 38510..39268 | - | 759 | WP_193115157.1 | DUF2971 domain-containing protein | - |
| IGI29_RS23100 | 39314..39667 | - | 354 | WP_174563990.1 | hypothetical protein | - |
| IGI29_RS23105 | 39673..40338 | - | 666 | WP_174563949.1 | AAA family ATPase | - |
| IGI29_RS23110 | 40658..40927 | + | 270 | WP_001711191.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| IGI29_RS23115 | 40935..41456 | + | 522 | WP_193115156.1 | GNAT family N-acetyltransferase | Toxin Detail |
| IGI29_RS23120 | 41625..41876 | - | 252 | WP_193115155.1 | hypothetical protein | - |
| IGI29_RS23125 | 41879..42571 | - | 693 | WP_033546097.1 | membrane protein | - |
| IGI29_RS23130 | 42585..42908 | - | 324 | WP_001711185.1 | hypothetical protein | - |
| IGI29_RS23135 | 42983..43765 | - | 783 | WP_193115154.1 | receptor-recognizing protein | - |
| IGI29_RS23670 | 43832..44233 | - | 402 | WP_225902027.1 | tail fiber domain-containing protein | - |
| IGI29_RS23675 | 47249..48262 | - | 1014 | Protein_47 | phage tail protein | - |
| IGI29_RS23150 | 48821..53548 | - | 4728 | WP_193115153.1 | phage tail protein | - |
| IGI29_RS23155 | 53566..54159 | - | 594 | WP_134894010.1 | tail assembly protein | - |
| IGI29_RS23160 | 54147..54944 | - | 798 | WP_193115152.1 | C40 family peptidase | - |
| IGI29_RS23165 | 54934..55635 | - | 702 | WP_032187297.1 | phage minor tail protein L | - |
| IGI29_RS23170 | 55718..56053 | - | 336 | WP_063122783.1 | phage tail protein | - |
| IGI29_RS23175 | 56096..60667 | - | 4572 | WP_193115151.1 | tape measure protein | - |
| IGI29_RS23180 | 60675..60899 | - | 225 | WP_000952686.1 | hypothetical protein | - |
| IGI29_RS23185 | 61025..61342 | - | 318 | WP_000163861.1 | hypothetical protein | - |
| IGI29_RS23190 | 61428..61916 | - | 489 | Protein_56 | hypothetical protein | - |
| IGI29_RS23195 | 61991..62374 | - | 384 | WP_063122781.1 | minor capsid protein | - |
| IGI29_RS23200 | 62376..62849 | - | 474 | WP_193115149.1 | hypothetical protein | - |
| IGI29_RS23205 | 62840..63184 | - | 345 | WP_193115148.1 | hypothetical protein | - |
| IGI29_RS23210 | 63282..64115 | - | 834 | WP_032187306.1 | hypothetical protein | - |
| IGI29_RS23215 | 64115..64549 | - | 435 | WP_032187307.1 | hypothetical protein | - |
| IGI29_RS23220 | 64593..65021 | - | 429 | WP_063085588.1 | Ig-like domain-containing protein | - |
| IGI29_RS23225 | 65096..65971 | - | 876 | WP_032187309.1 | hypothetical protein | - |
| IGI29_RS23230 | 65998..66894 | - | 897 | WP_032187310.1 | hypothetical protein | - |
| IGI29_RS23235 | 66917..68491 | - | 1575 | WP_193115147.1 | phage portal protein | - |
| IGI29_RS23240 | 68524..69780 | - | 1257 | WP_193115146.1 | phage terminase large subunit | - |
| IGI29_RS23245 | 69783..70424 | - | 642 | WP_097476197.1 | DNA-binding protein | - |
| IGI29_RS23250 | 70620..70886 | - | 267 | WP_000176291.1 | hypothetical protein | - |
| IGI29_RS23255 | 70896..71786 | - | 891 | WP_193115145.1 | hypothetical protein | - |
| IGI29_RS23260 | 71792..72046 | - | 255 | WP_089075227.1 | hypothetical protein | - |
| IGI29_RS23265 | 72039..72677 | - | 639 | WP_016051719.1 | ATP-binding cassette domain-containing protein | - |
| IGI29_RS23270 | 72674..73342 | - | 669 | WP_000164561.1 | ParB/Srx family N-terminal domain-containing protein | - |
| IGI29_RS23275 | 73342..74045 | - | 704 | Protein_73 | ParB N-terminal domain-containing protein | - |
| IGI29_RS23280 | 74105..75664 | + | 1560 | WP_193115143.1 | DEAD/DEAH box helicase | - |
| IGI29_RS23285 | 75667..75945 | + | 279 | WP_074014861.1 | hypothetical protein | - |
| IGI29_RS23290 | 76008..76535 | + | 528 | WP_157921358.1 | hypothetical protein | - |
| IGI29_RS23295 | 76832..77422 | + | 591 | WP_063091537.1 | hypothetical protein | - |
| IGI29_RS23300 | 77422..77943 | + | 522 | WP_063122771.1 | transcriptional regulator | - |
| IGI29_RS23305 | 78269..78919 | + | 651 | WP_193115142.1 | hypothetical protein | - |
| IGI29_RS23310 | 78967..79194 | + | 228 | WP_000234280.1 | hypothetical protein | - |
| IGI29_RS23315 | 79237..79467 | + | 231 | WP_094337988.1 | hypothetical protein | - |
| IGI29_RS23320 | 80098..80580 | - | 483 | WP_096963181.1 | hypothetical protein | - |
| IGI29_RS23325 | 80785..81066 | - | 282 | WP_000129290.1 | hypothetical protein | - |
| IGI29_RS23330 | 81402..81776 | - | 375 | WP_193115141.1 | hypothetical protein | - |
| IGI29_RS23335 | 81894..82289 | - | 396 | WP_193115140.1 | hypothetical protein | - |
| IGI29_RS23340 | 82416..82727 | - | 312 | WP_001711135.1 | hypothetical protein | - |
| IGI29_RS23345 | 82888..83217 | - | 330 | WP_193115139.1 | hypothetical protein | - |
| IGI29_RS23350 | 83357..83572 | - | 216 | WP_162521988.1 | hypothetical protein | - |
| IGI29_RS23355 | 85148..85333 | - | 186 | WP_053292512.1 | hypothetical protein | - |
| IGI29_RS23360 | 85370..85669 | - | 300 | WP_064759420.1 | hypothetical protein | - |
| IGI29_RS23365 | 85745..86221 | - | 477 | WP_225902022.1 | hypothetical protein | - |
| IGI29_RS23370 | 86284..87969 | - | 1686 | WP_193115137.1 | DUF4942 domain-containing protein | - |
| IGI29_RS23375 | 88073..88687 | - | 615 | WP_193115136.1 | hypothetical protein | - |
| IGI29_RS23380 | 89027..89599 | - | 573 | WP_193115135.1 | hypothetical protein | - |
| IGI29_RS23385 | 89708..90523 | - | 816 | WP_225902021.1 | Rha family transcriptional regulator | - |
| IGI29_RS23390 | 90630..90818 | - | 189 | WP_033546609.1 | hypothetical protein | - |
| IGI29_RS23395 | 90828..91328 | - | 501 | WP_193115134.1 | hypothetical protein | - |
| IGI29_RS23400 | 91471..92079 | - | 609 | WP_033546608.1 | ribonuclease HI | - |
| IGI29_RS23405 | 92675..92905 | - | 231 | WP_025670509.1 | hypothetical protein | - |
| IGI29_RS23410 | 93108..93701 | - | 594 | WP_193115133.1 | phage N-6-adenine-methyltransferase | - |
| IGI29_RS23415 | 93857..94729 | - | 873 | WP_193115132.1 | hypothetical protein | - |
| IGI29_RS23420 | 94942..96048 | + | 1107 | WP_063122761.1 | 50S ribosome-binding GTPase | - |
| IGI29_RS23425 | 96087..96626 | - | 540 | WP_106504651.1 | 3'-5' exonuclease | - |
| IGI29_RS23430 | 96636..97055 | - | 420 | WP_106504650.1 | hypothetical protein | - |
| IGI29_RS23435 | 97119..97763 | - | 645 | WP_087905084.1 | AAA family ATPase | - |
| IGI29_RS23440 | 97763..98239 | - | 477 | WP_053292504.1 | dihydrofolate reductase | - |
| IGI29_RS23445 | 98236..98631 | - | 396 | WP_160956520.1 | hypothetical protein | - |
| IGI29_RS23450 | 98651..99754 | - | 1104 | WP_033546603.1 | thymidylate synthase | - |
| IGI29_RS23455 | 99934..100812 | - | 879 | WP_032187593.1 | phosphoribosyl-ATP pyrophosphohydrolase | - |
| IGI29_RS23460 | 101078..101647 | - | 570 | WP_025670519.1 | hypothetical protein | - |
| IGI29_RS23465 | 101826..102572 | - | 747 | WP_033546602.1 | hypothetical protein | - |
| IGI29_RS23470 | 102562..104478 | - | 1917 | WP_193115131.1 | AAA family ATPase | - |
| IGI29_RS23680 | 104475..104753 | - | 279 | WP_225904519.1 | hypothetical protein | - |
| IGI29_RS23475 | 104708..105793 | - | 1086 | WP_193115130.1 | metallophosphoesterase | - |
| IGI29_RS23480 | 105927..106050 | - | 124 | Protein_115 | transposase | - |
| IGI29_RS23485 | 106056..107264 | + | 1209 | WP_214444999.1 | IS200-IS605 family transposase IS609 | Transposase |
| IGI29_RS23490 | 107334..107978 | - | 645 | WP_023135693.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|