MGE detailed information
MGE type: Prophage MGE length: 23160 bp
Accession: NZ_CP075474 Location: 4259128..4282287 Organism: Escherichia coli strain NT1N28 Replicon: chromosome
Accession: NZ_CP075474 Location: 4259128..4282287 Organism: Escherichia coli strain NT1N28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI29_RS21030 (4254184) | 4254184..4254600 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| IGI29_RS21035 (4254711) | 4254711..4255423 | - | 713 | Protein_3999 | acid phosphatase AphA | - |
| IGI29_RS23820 (4255825) | 4255825..4256047 | + | 223 | Protein_4000 | hypothetical protein | - |
| IGI29_RS21045 (4256550) | 4256550..4257743 | - | 1194 | WP_000486988.1 | aromatic amino acid transaminase | - |
| IGI29_RS21050 (4257996) | 4257996..4259075 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| IGI29_RS21055 (4259128) | 4259128..4260543 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| IGI29_RS21060 (4260626) | 4260626..4261609 | + | 984 | WP_000235509.1 | Quinone oxidoreductase 1 | VF |
| IGI29_RS21065 (4261775) | 4261775..4262017 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| IGI29_RS21070 (4262151) | 4262151..4263188 | - | 1038 | WP_023277396.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| IGI29_RS21075 (4263277) | 4263277..4264374 | + | 1098 | WP_000332259.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IGI29_RS21080 (4264435) | 4264435..4264683 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| IGI29_RS21085 (4264906) | 4264906..4265457 | + | 552 | WP_000543834.1 | SLATT domain-containing protein | - |
| IGI29_RS21090 (4265435) | 4265435..4266805 | + | 1371 | WP_039268535.1 | reverse transcriptase domain-containing protein | - |
| IGI29_RS21095 (4266918) | 4266918..4267502 | - | 585 | WP_051123894.1 | tail fiber assembly protein | - |
| IGI29_RS21100 (4267502) | 4267502..4268842 | - | 1341 | WP_231707768.1 | phage tail protein | - |
| IGI29_RS21105 (4268928) | 4268928..4269182 | - | 255 | Protein_4013 | helix-turn-helix domain-containing protein | - |
| IGI29_RS21110 (4269179) | 4269179..4269415 | - | 237 | WP_001610359.1 | hypothetical protein | - |
| IGI29_RS21115 (4269408) | 4269408..4269986 | - | 579 | WP_225902059.1 | ash family protein | - |
| IGI29_RS23645 (4269916) | 4269916..4270095 | - | 180 | WP_001341559.1 | DUF4222 domain-containing protein | - |
| IGI29_RS21120 (4270241) | 4270241..4270792 | - | 552 | WP_000515860.1 | protein YmfL | - |
| IGI29_RS21125 (4270836) | 4270836..4271036 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| IGI29_RS21130 (4271127) | 4271127..4271801 | + | 675 | WP_000859461.1 | LexA family transcriptional regulator | - |
| IGI29_RS21135 (4272488) | 4272488..4272850 | + | 363 | WP_000135680.1 | protein YfdP | - |
| IGI29_RS21140 (4272916) | 4272916..4273740 | + | 825 | WP_000081311.1 | DUF2303 family protein | - |
| IGI29_RS21145 (4273929) | 4273929..4274711 | + | 783 | WP_032158411.1 | hypothetical protein | - |
| IGI29_RS21150 (4274748) | 4274748..4275029 | + | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| IGI29_RS21155 (4275077) | 4275077..4275250 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| IGI29_RS21160 (4275290) | 4275290..4275676 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| IGI29_RS21165 (4275706) | 4275706..4276215 | - | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| IGI29_RS21170 (4276532) | 4276532..4276636 | - | 105 | Protein_4027 | tRNA-dihydrouridine synthase | - |
| IGI29_RS21175 (4276762) | 4276762..4277730 | - | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| IGI29_RS21180 (4278065) | 4278065..4278805 | - | 741 | WP_001485178.1 | DUF2713 family protein | - |
| IGI29_RS23825 (4278796) | 4278796..4279080 | - | 285 | WP_077492761.1 | hypothetical protein | - |
| IGI29_RS21185 (4279399) | 4279399..4279914 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| IGI29_RS21190 (4279956) | 4279956..4280165 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| IGI29_RS21195 (4280281) | 4280281..4281606 | - | 1326 | WP_001301116.1 | MATE family efflux transporter DinF | - |
| IGI29_RS21200 (4281679) | 4281679..4282287 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| IGI29_RS21205 (4282397) | 4282397..4282765 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| IGI29_RS21210 (4282936) | 4282936..4285359 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| IGI29_RS21215 (4285514) | 4285514..4286386 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| IGI29_RS21220 (4286399) | 4286399..4286896 | - | 498 | WP_001295693.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|