MGE detailed information
MGE type: Genomic_island MGE length: 20241 bp
Accession: NZ_CP075474 Location: 4154149..4174389 Organism: Escherichia coli strain NT1N28 Replicon: chromosome
Accession: NZ_CP075474 Location: 4154149..4174389 Organism: Escherichia coli strain NT1N28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI29_RS20565 (4150578) | 4150578..4153937 | - | 3360 | WP_193115263.1 | STY4851/ECs_5259 family protein | - |
| IGI29_RS20570 (4154149) | 4154149..4155801 | + | 1653 | WP_000880884.1 | type II Zorya anti-phage system protein ZorA2 | - |
| IGI29_RS20575 (4155808) | 4155808..4156515 | + | 708 | WP_000357807.1 | type II Zorya anti-phage system protein ZorB2 | - |
| IGI29_RS20580 (4156519) | 4156519..4157622 | + | 1104 | WP_000777276.1 | type II Zorya anti-phage system protein ZorE | - |
| IGI29_RS20585 (4157847) | 4157847..4158089 | + | 243 | Protein_3910 | N-acetylneuraminic acid mutarotase | - |
| IGI29_RS20590 (4158177) | 4158177..4159157 | + | 981 | WP_000019446.1 | IS5 family transposase ISKpn26 | Transposase |
| IGI29_RS20595 (4159195) | 4159195..4159665 | - | 471 | WP_225904511.1 | hypothetical protein | - |
| IGI29_RS20600 (4160093) | 4160093..4161061 | + | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| IGI29_RS20605 (4161151) | 4161151..4161888 | - | 738 | WP_193115311.1 | OmpW family outer membrane protein | - |
| IGI29_RS20610 (4162255) | 4162255..4162596 | + | 342 | Protein_3915 | IS3 family transposase ISEc31 | Transposase |
| IGI29_RS20620 (4163413) | 4163413..4163674 | - | 262 | Protein_3916 | IS4 family transposase IS186B | Transposase |
| IGI29_RS20625 (4163673) | 4163673..4163843 | + | 171 | Protein_3917 | antirestriction protein | - |
| IGI29_RS20630 (4163859) | 4163859..4164098 | + | 240 | Protein_3918 | hypothetical protein | - |
| IGI29_RS20635 (4164131) | 4164131..4164289 | + | 159 | WP_231713039.1 | DUF4942 domain-containing protein | - |
| IGI29_RS20640 (4165038) | 4165038..4166576 | + | 1539 | WP_185229439.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| IGI29_RS20645 (4166942) | 4166942..4168276 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| IGI29_RS20650 (4168356) | 4168356..4170503 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| IGI29_RS20655 (4170562) | 4170562..4172019 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| IGI29_RS20660 (4172256) | 4172256..4173773 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| IGI29_RS20665 (4173892) | 4173892..4174065 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| IGI29_RS20670 (4174093) | 4174093..4174389 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| IGI29_RS20675 (4174616) | 4174616..4174888 | - | 273 | WP_073544413.1 | GNAT family N-acetyltransferase | - |
| IGI29_RS20680 (4174900) | 4174900..4175130 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| IGI29_RS20685 (4175311) | 4175311..4176942 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| IGI29_RS20690 (4176939) | 4176939..4177658 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|