MGE detailed information
MGE type: Mobilizable plasmid MGE length: 148421 bp
Accession: NZ_CP075473 Location: 1..148421 Organism: Escherichia coli strain NT1N28 Replicon: plasmid pNT1N28-tetX4
Accession: NZ_CP075473 Location: 1..148421 Organism: Escherichia coli strain NT1N28 Replicon: plasmid pNT1N28-tetX4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI29_RS00005 | 63..767 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI29_RS00010 | 811..912 | - | 102 | Protein_1 | SMR family transporter | - |
| IGI29_RS00015 | 1096..1569 | - | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| IGI29_RS00020 | 1725..2738 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| IGI29_RS00025 | 2884..3588 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI29_RS00030 | 3641..3766 | + | 126 | Protein_5 | quaternary ammonium compound efflux SMR transporter QacL | - |
| IGI29_RS00035 | 4013..4645 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| IGI29_RS00040 | 4668..4943 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| IGI29_RS00045 | 4946..5737 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| IGI29_RS00050 | 6206..6451 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| IGI29_RS00055 | 6489..7352 | - | 864 | WP_054377175.1 | SDR family oxidoreductase | - |
| IGI29_RS00060 | 7498..8727 | - | 1230 | WP_032492336.1 | Putative bacilysin exporter BacE | ARG |
| IGI29_RS00065 | 8855..9559 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IGI29_RS00070 | 9623..9814 | - | 192 | Protein_13 | mercuric resistance transcriptional repressor protein MerD | - |
| IGI29_RS00075 | 9832..11526 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| IGI29_RS00080 | 11578..12000 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| IGI29_RS00085 | 12036..12311 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| IGI29_RS00090 | 12325..12675 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| IGI29_RS00095 | 12747..13181 | + | 435 | WP_000429836.1 | Hg(II)-responsive transcriptional regulator | - |
| IGI29_RS00100 | 13214..14149 | - | 936 | Protein_19 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IGI29_RS00105 | 14179..14883 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI29_RS00110 | 14978..15118 | - | 141 | WP_160784086.1 | hypothetical protein | - |
| IGI29_RS00115 | 15629..15974 | - | 346 | Protein_22 | IS1 family transposase IS1X4 | Transposase |
| IGI29_RS00120 | 16243..16998 | - | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| IGI29_RS00125 | 17532..18115 | + | 584 | Protein_24 | IS1 family transposase | - |
| IGI29_RS00130 | 18126..18317 | - | 192 | WP_001515192.1 | hypothetical protein | - |
| IGI29_RS00135 | 18326..18661 | - | 336 | WP_001039462.1 | plasmid stabilization protein StbA | - |
| IGI29_RS00140 | 19372..19662 | + | 291 | WP_001471781.1 | hypothetical protein | - |
| IGI29_RS00145 | 19829..20797 | - | 969 | WP_077816224.1 | IS5 family transposase IS903B | Transposase |
| IGI29_RS00150 | 20991..22001 | - | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| IGI29_RS00155 | 22742..23908 | + | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| IGI29_RS00160 | 23908..24879 | + | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IGI29_RS00165 | 25331..26176 | - | 846 | Protein_32 | IS3 family transposase IS911 | Transposase |
| IGI29_RS00170 | 26195..26893 | - | 699 | Protein_33 | IS1 family transposase | - |
| IGI29_RS00175 | 28836..30373 | - | 1538 | Protein_34 | IS66 family transposase ISEc22 | Transposase |
| IGI29_RS00180 | 30422..30769 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| IGI29_RS00190 | 31703..33028 | - | 1326 | WP_021512928.1 | reactive chlorine resistance oxidoreductase RclA | - |
| IGI29_RS00195 | 33138..33836 | + | 699 | Protein_38 | IS1 family transposase | - |
| IGI29_RS00200 | 33937..34218 | - | 282 | WP_000639434.1 | hypothetical protein | - |
| IGI29_RS00205 | 34365..34514 | + | 150 | Protein_40 | IS3 family transposase ISEhe3 | Transposase |
| IGI29_RS00210 | 34596..35747 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| IGI29_RS00215 | 35756..36653 | + | 898 | Protein_42 | IS3 family transposase ISEhe3 | Transposase |
| IGI29_RS23495 | 36698..36889 | + | 192 | WP_001326966.1 | hypothetical protein | - |
| IGI29_RS00220 | 36947..37735 | - | 789 | WP_022631000.1 | site-specific integrase | - |
| IGI29_RS00225 | 37755..38426 | - | 672 | WP_000796235.1 | hypothetical protein | - |
| IGI29_RS00230 | 39356..40330 | - | 975 | WP_001148756.1 | sensor domain-containing diguanylate cyclase | - |
| IGI29_RS00240 | 42303..43211 | + | 909 | Protein_48 | HNH endonuclease | - |
| IGI29_RS00245 | 43599..43949 | - | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| IGI29_RS00250 | 44093..44524 | - | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| IGI29_RS00255 | 44775..46250 | - | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| IGI29_RS00260 | 46243..46923 | - | 681 | WP_000697969.1 | Transcriptional regulatory protein CusR | VF |
| IGI29_RS00265 | 47113..48498 | + | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| IGI29_RS00270 | 48526..48879 | + | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| IGI29_RS00275 | 48993..50285 | + | 1293 | WP_001381488.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| IGI29_RS00280 | 50296..53442 | + | 3147 | WP_020219104.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| IGI29_RS00285 | 53529..53969 | + | 441 | WP_000758229.1 | DUF411 domain-containing protein | - |
| IGI29_RS00290 | 54067..56544 | + | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| IGI29_RS00295 | 56585..56782 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| IGI29_RS00300 | 56816..57106 | - | 291 | WP_073503549.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| IGI29_RS00305 | 57126..58094 | + | 969 | WP_077783444.1 | IS5 family transposase IS903B | Transposase |
| IGI29_RS00310 | 58131..58388 | - | 258 | WP_105278499.1 | hypothetical protein | - |
| IGI29_RS00320 | 59306..59587 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IGI29_RS00325 | 59577..59828 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| IGI29_RS00330 | 61062..61898 | + | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| IGI29_RS00335 | 61938..62384 | + | 447 | Protein_67 | hypothetical protein | - |
| IGI29_RS00340 | 62521..62877 | + | 357 | WP_000456533.1 | DNA distortion polypeptide 3 | - |
| IGI29_RS00345 | 62874..63851 | - | 978 | WP_024245156.1 | hypothetical protein | - |
| IGI29_RS00350 | 63876..64157 | - | 282 | WP_001185482.1 | hypothetical protein | - |
| IGI29_RS00355 | 64255..64917 | - | 663 | WP_000516402.1 | division plane positioning ATPase MipZ | - |
| IGI29_RS00360 | 65298..65942 | + | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IGI29_RS00365 | 66097..66180 | - | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| IGI29_RS00370 | 66161..66595 | + | 435 | WP_053273090.1 | hypothetical protein | - |
| IGI29_RS00380 | 67652..69088 | - | 1437 | WP_000105383.1 | glutathione synthase | - |
| IGI29_RS00385 | 69355..70059 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI29_RS00390 | 70113..70370 | + | 258 | Protein_78 | ISKra4 family transposase | - |
| IGI29_RS00395 | 70761..71417 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| IGI29_RS00400 | 71578..72282 | + | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| IGI29_RS00405 | 72336..72869 | + | 534 | Protein_81 | IS6 family transposase IS26 | Transposase |
| IGI29_RS00410 | 72923..73390 | + | 468 | Protein_82 | conjugal transfer protein | - |
| IGI29_RS23685 | 73635..73751 | + | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| IGI29_RS00420 | 73767..75686 | + | 1920 | WP_025989258.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| IGI29_RS00425 | 75805..75972 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| IGI29_RS00430 | 76233..76865 | + | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| IGI29_RS00435 | 77268..77762 | + | 495 | WP_077141251.1 | IS91 family transposase ISAzo26 | Transposase |
| IGI29_RS00440 | 77873..78733 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| IGI29_RS00445 | 78916..79473 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IGI29_RS00450 | 79637..80650 | + | 1014 | Protein_90 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IGI29_RS00455 | 80703..81407 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI29_RS00460 | 81473..81973 | + | 501 | Protein_92 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IGI29_RS00465 | 82031..82273 | + | 243 | WP_000844627.1 | transposase | - |
| IGI29_RS00470 | 82305..82955 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IGI29_RS00475 | 83061..84260 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| IGI29_RS00480 | 84292..85176 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| IGI29_RS00485 | 85314..85706 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| IGI29_RS00490 | 85710..86471 | + | 762 | Protein_98 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IGI29_RS00495 | 86507..88465 | - | 1959 | Protein_99 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IGI29_RS00500 | 88570..89274 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IGI29_RS00505 | 89328..89981 | - | 654 | Protein_101 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00510 | 90093..90398 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| IGI29_RS00515 | 90426..91640 | - | 1215 | WP_034167813.1 | Inner membrane transport protein YdhC | ARG |
| IGI29_RS23510 | 91857..92741 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| IGI29_RS00525 | 92772..94136 | - | 1365 | Protein_105 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00530 | 94150..94599 | - | 450 | WP_166488538.1 | MarR family transcriptional regulator | - |
| IGI29_RS00535 | 94828..95457 | + | 630 | WP_136655510.1 | Chloramphenicol acetyltransferase | VF |
| IGI29_RS00540 | 95505..97118 | - | 1614 | WP_136655509.1 | ATP-binding cassette domain-containing protein | - |
| IGI29_RS00545 | 97480..98973 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00550 | 99312..100469 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI29_RS00555 | 100459..101304 | - | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
| IGI29_RS00560 | 102086..103450 | - | 1365 | Protein_112 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00565 | 103464..103913 | - | 450 | WP_166488538.1 | MarR family transcriptional regulator | - |
| IGI29_RS00570 | 104142..104771 | + | 630 | WP_136655510.1 | Chloramphenicol acetyltransferase | VF |
| IGI29_RS00575 | 104819..106432 | - | 1614 | WP_136655509.1 | ATP-binding cassette domain-containing protein | - |
| IGI29_RS00580 | 106794..108287 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00585 | 108626..109783 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI29_RS00590 | 109773..110618 | - | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
| IGI29_RS00595 | 111400..112764 | - | 1365 | Protein_119 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00600 | 112778..113227 | - | 450 | WP_166488538.1 | MarR family transcriptional regulator | - |
| IGI29_RS00605 | 113456..114085 | + | 630 | WP_136655510.1 | Chloramphenicol acetyltransferase | VF |
| IGI29_RS00610 | 114133..115746 | - | 1614 | WP_136655509.1 | ATP-binding cassette domain-containing protein | - |
| IGI29_RS00615 | 116108..117601 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00620 | 117940..119097 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI29_RS00625 | 119087..119932 | - | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
| IGI29_RS00630 | 120714..122078 | - | 1365 | Protein_126 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00635 | 122092..122541 | - | 450 | WP_166488538.1 | MarR family transcriptional regulator | - |
| IGI29_RS00640 | 122770..123399 | + | 630 | WP_136655510.1 | Chloramphenicol acetyltransferase | VF |
| IGI29_RS00645 | 123447..125060 | - | 1614 | WP_136655509.1 | ATP-binding cassette domain-containing protein | - |
| IGI29_RS00650 | 125422..126915 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00655 | 127254..128411 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI29_RS00660 | 128401..129246 | - | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
| IGI29_RS00665 | 130028..131392 | - | 1365 | Protein_133 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00670 | 131406..131855 | - | 450 | WP_166488538.1 | MarR family transcriptional regulator | - |
| IGI29_RS00675 | 132084..132713 | + | 630 | WP_136655510.1 | Chloramphenicol acetyltransferase | VF |
| IGI29_RS00680 | 132761..134374 | - | 1614 | WP_136655509.1 | ATP-binding cassette domain-containing protein | - |
| IGI29_RS00685 | 134736..136229 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00690 | 136568..137725 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI29_RS00695 | 137715..138560 | - | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
| IGI29_RS00700 | 139342..140706 | - | 1365 | Protein_140 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00705 | 140720..141169 | - | 450 | WP_166488538.1 | MarR family transcriptional regulator | - |
| IGI29_RS00710 | 141398..142027 | + | 630 | WP_136655510.1 | Chloramphenicol acetyltransferase | VF |
| IGI29_RS00715 | 142075..143688 | - | 1614 | WP_136655509.1 | ATP-binding cassette domain-containing protein | - |
| IGI29_RS00720 | 144050..145543 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| IGI29_RS00725 | 145882..147039 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| IGI29_RS00730 | 147029..147874 | - | 846 | WP_164538741.1 | macrolide hydrolase EstT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|