MGE detailed information
MGE type: Prophage MGE length: 24414 bp
Accession: NZ_CP075169 Location: 306568..330981 Organism: Sodalis ligni strain dw23 Replicon: chromosome
Accession: NZ_CP075169 Location: 306568..330981 Organism: Sodalis ligni strain dw23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTU79_RS01355 (GTU79_01355) | 301613..301870 | + | 258 | WP_132923843.1 | acetolactate synthase 2 small subunit | - |
| GTU79_RS01360 (GTU79_01360) | 301892..302821 | + | 930 | WP_132923842.1 | branched-chain amino acid transaminase | - |
| GTU79_RS01365 (GTU79_01365) | 303084..304934 | + | 1851 | WP_203524396.1 | dihydroxy-acid dehydratase | - |
| GTU79_RS01370 (GTU79_01370) | 304938..306485 | + | 1548 | WP_203524395.1 | threonine ammonia-lyase, biosynthetic | - |
| GTU79_RS01375 (GTU79_01375) | 306568..307332 | - | 765 | WP_214513646.1 | Outer membrane protein YopM | VF |
| GTU79_RS01380 (GTU79_01380) | 307396..308292 | - | 897 | WP_203524393.1 | HTH-type transcriptional activator IlvY | - |
| GTU79_RS01385 (GTU79_01385) | 308516..309994 | + | 1479 | WP_214513647.1 | ketol-acid reductoisomerase | - |
| GTU79_RS01390 (GTU79_01390) | 310207..310845 | - | 639 | WP_203524391.1 | nitroreductase family protein | - |
| GTU79_RS01395 (GTU79_01395) | 311298..311492 | - | 195 | WP_214513648.1 | hypothetical protein | - |
| GTU79_RS01400 (GTU79_01400) | 311626..312647 | + | 1022 | Protein_269 | IS21 family transposase ISRso19 | Transposase |
| GTU79_RS01405 (GTU79_01405) | 312644..313432 | + | 789 | WP_214513649.1 | IS21 family transposase ISAeme17 | Transposase |
| GTU79_RS01410 (GTU79_01410) | 313772..314071 | - | 300 | WP_203524389.1 | helix-turn-helix transcriptional regulator | - |
| GTU79_RS01415 (GTU79_01415) | 314075..314424 | - | 350 | Protein_272 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GTU79_RS01420 (GTU79_01420) | 314540..314734 | - | 195 | WP_203524388.1 | helix-turn-helix transcriptional regulator | - |
| GTU79_RS01430 (GTU79_01430) | 315132..315605 | + | 474 | WP_203524387.1 | hypothetical protein | - |
| GTU79_RS01435 (GTU79_01435) | 315717..315965 | - | 249 | WP_253073470.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GTU79_RS01440 (GTU79_01440) | 315993..316208 | - | 216 | WP_203524537.1 | stability determinant | Antitoxin Detail |
| GTU79_RS01445 (GTU79_01445) | 316450..316842 | - | 393 | WP_203524386.1 | hypothetical protein | - |
| GTU79_RS01450 (GTU79_01450) | 316878..318061 | - | 1184 | Protein_278 | IS3 family transposase ISAs17 | Transposase |
| GTU79_RS01455 (GTU79_01455) | 318512..318811 | - | 300 | WP_203524385.1 | XRE family transcriptional regulator | - |
| GTU79_RS01460 (GTU79_01460) | 318991..321021 | + | 2031 | WP_203524384.1 | DNA helicase Rep | - |
| GTU79_RS01465 (GTU79_01465) | 322118..322843 | + | 726 | WP_214513650.1 | hypothetical protein | - |
| GTU79_RS01470 (GTU79_01470) | 323184..323624 | + | 441 | WP_214513651.1 | hypothetical protein | - |
| GTU79_RS01475 (GTU79_01475) | 323679..324362 | + | 684 | WP_203524382.1 | hypothetical protein | - |
| GTU79_RS01480 (GTU79_01480) | 324692..326185 | - | 1494 | WP_203524381.1 | guanosine-5'-triphosphate,3'-diphosphate diphosphatase | - |
| GTU79_RS01485 (GTU79_01485) | 326191..327477 | - | 1287 | WP_203524380.1 | ATP-dependent RNA helicase RhlB | - |
| GTU79_RS01490 (GTU79_01490) | 327596..327922 | + | 327 | WP_132923830.1 | thioredoxin TrxA | - |
| GTU79_RS01495 (GTU79_01495) | 328315..329574 | + | 1260 | WP_132923829.1 | Transcription termination factor Rho | VF |
| GTU79_RS01500 (GTU79_01500) | 329872..330981 | + | 1110 | WP_203524379.1 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase | VF |
| GTU79_RS01505 (GTU79_01505) | 330978..332024 | + | 1047 | WP_203524378.1 | ECA polysaccharide chain length modulation protein | - |
| GTU79_RS01510 (GTU79_01510) | 332203..333333 | + | 1131 | WP_203524377.1 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) | - |
| GTU79_RS01515 (GTU79_01515) | 333330..334592 | + | 1263 | WP_203524376.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | - |
| GTU79_RS01520 (GTU79_01520) | 334589..335656 | + | 1068 | WP_203524375.1 | dTDP-glucose 4,6-dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|