MGE detailed information
MGE type: Genomic_island MGE length: 19788 bp
Accession: NZ_CP075169 Location: 2494791..2514578 Organism: Sodalis ligni strain dw23 Replicon: chromosome
Accession: NZ_CP075169 Location: 2494791..2514578 Organism: Sodalis ligni strain dw23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTU79_RS11595 (GTU79_11590) | 2490054..2490458 | - | 405 | WP_203521809.1 | VOC family protein | - |
| GTU79_RS11600 (GTU79_11595) | 2490634..2492091 | - | 1458 | WP_253073551.1 | AMP-binding protein | - |
| GTU79_RS11605 (GTU79_11600) | 2492060..2492956 | - | 897 | WP_253073552.1 | AMP-binding protein | - |
| GTU79_RS11610 (GTU79_11605) | 2492984..2493773 | - | 790 | Protein_2286 | IS21-like element helper ATPase IstB | - |
| GTU79_RS11615 (GTU79_11610) | 2493770..2494792 | - | 1023 | WP_203520365.1 | IS21 family transposase | - |
| GTU79_RS11620 (GTU79_11615) | 2494791..2495336 | + | 546 | WP_203521806.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| GTU79_RS11625 (GTU79_11620) | 2495340..2495915 | + | 576 | WP_214513952.1 | PIN domain-containing protein | Toxin Detail |
| GTU79_RS11630 (GTU79_11625) | 2496432..2498048 | - | 1617 | WP_203521804.1 | IS66 family transposase ISShdy2 | Transposase |
| GTU79_RS11635 (GTU79_11630) | 2498115..2498450 | - | 336 | WP_214513953.1 | IS66 family transposase ISPlu20 | Transposase |
| GTU79_RS30250 | 2498444..2498860 | - | 417 | WP_253073553.1 | IS66 family transposase ISPlu20 | Transposase |
| GTU79_RS30255 | 2499084..2499272 | - | 189 | Protein_2293 | ISL3 family transposase | - |
| GTU79_RS30260 | 2499800..2500066 | - | 267 | WP_253073554.1 | hypothetical protein | - |
| GTU79_RS11655 (GTU79_11650) | 2500711..2500950 | + | 240 | WP_275956936.1 | transposase | - |
| GTU79_RS11660 (GTU79_11655) | 2501137..2501544 | + | 408 | WP_253073555.1 | hypothetical protein | - |
| GTU79_RS11665 (GTU79_11660) | 2501600..2502806 | + | 1207 | Protein_2297 | IS256 family transposase | - |
| GTU79_RS11670 (GTU79_11665) | 2503650..2504682 | - | 1033 | Protein_2298 | IS630 family transposase | - |
| GTU79_RS11675 (GTU79_11670) | 2505145..2505690 | - | 546 | WP_214513954.1 | Multidrug resistance protein MdtL | VF |
| GTU79_RS11680 (GTU79_11675) | 2505744..2506346 | - | 603 | WP_253073556.1 | TetR/AcrR family transcriptional regulator | - |
| GTU79_RS11685 (GTU79_11680) | 2506480..2507889 | - | 1410 | WP_203521798.1 | hypothetical protein | VF |
| GTU79_RS11690 (GTU79_11685) | 2507882..2511019 | - | 3138 | WP_214513955.1 | Multidrug resistance protein MdtC | VF |
| GTU79_RS11695 (GTU79_11690) | 2511030..2512163 | - | 1134 | WP_214514136.1 | Multidrug resistance protein MdtA | VF |
| GTU79_RS30265 | 2513158..2513700 | - | 543 | Protein_2304 | IS3 family transposase ISYpe1 | Transposase |
| GTU79_RS11705 (GTU79_11700) | 2513892..2514578 | + | 687 | WP_214513957.1 | IS110 family transposase ISBj4 | Transposase |
| GTU79_RS11715 (GTU79_11710) | 2514980..2515779 | - | 800 | Protein_2306 | site-specific integrase | - |
| GTU79_RS11720 (GTU79_11715) | 2516195..2516488 | + | 294 | WP_203521794.1 | DUF1778 domain-containing protein | - |
| GTU79_RS11725 (GTU79_11720) | 2516485..2516973 | + | 489 | WP_203521793.1 | GNAT family N-acetyltransferase | - |
| GTU79_RS11730 (GTU79_11725) | 2517037..2517945 | - | 909 | Protein_2309 | integrase arm-type DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|