MGE detailed information
MGE type: Prophage MGE length: 42019 bp
Accession: NZ_CP075134 Location: 2662355..2704373 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN044909 Replicon: chromosome
Accession: NZ_CP075134 Location: 2662355..2704373 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN044909 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7S31_RS12930 (2657582) | 2657582..2659216 | - | 1635 | WP_000946088.1 | ABC transporter substrate-binding protein | - |
| A7S31_RS12935 (2659898) | 2659898..2660212 | + | 315 | WP_000182479.1 | TRL-like family protein | - |
| A7S31_RS12940 (2660361) | 2660361..2660891 | + | 531 | WP_001525288.1 | cytochrome b | - |
| A7S31_RS12945 (2660973) | 2660973..2662016 | - | 1044 | WP_000761735.1 | exo-alpha-sialidase | - |
| A7S31_RS12950 (2662355) | 2662355..2662822 | - | 468 | WP_001218120.1 | Hsp20 family protein | - |
| A7S31_RS12955 (2662975) | 2662975..2663247 | - | 273 | WP_000927827.1 | hypothetical protein | - |
| A7S31_RS12960 (2663447) | 2663447..2663572 | - | 126 | WP_000758947.1 | lipoprotein | - |
| A7S31_RS12965 (2663950) | 2663950..2664294 | + | 345 | WP_000977725.1 | c-type lysozyme inhibitor | - |
| A7S31_RS12975 (2665516) | 2665516..2666073 | - | 558 | WP_000789471.1 | hypothetical protein | VF |
| A7S31_RS12980 (2666885) | 2666885..2667148 | + | 264 | WP_012664625.1 | virulence protein PagD | - |
| A7S31_RS12985 (2667280) | 2667280..2667492 | + | 213 | WP_001537306.1 | cold shock-like protein CspF | - |
| A7S31_RS12990 (2667907) | 2667907..2668428 | + | 522 | WP_001525262.1 | RICIN domain-containing protein | - |
| A7S31_RS12995 (2668619) | 2668619..2668858 | + | 240 | WP_000497451.1 | virulence protein MsgA | - |
| A7S31_RS13000 (2669348) | 2669348..2670136 | + | 789 | WP_001033398.1 | hypothetical protein | - |
| A7S31_RS23390 (2670458) | 2670458..2670685 | + | 228 | WP_000787627.1 | hypothetical protein | - |
| A7S31_RS13005 (2671120) | 2671120..2672244 | - | 1125 | WP_000917268.1 | type III secretion system effector SopF | - |
| A7S31_RS13010 (2672692) | 2672692..2672862 | - | 171 | Protein_2559 | isocitrate/isopropylmalate family dehydrogenase | - |
| A7S31_RS13015 (2673011) | 2673011..2673352 | + | 342 | WP_223231758.1 | hypothetical protein | - |
| A7S31_RS13020 (2673745) | 2673745..2674170 | - | 426 | WP_001525274.1 | glutaredoxin-dependent arsenate reductase | - |
| A7S31_RS13025 (2674183) | 2674183..2675472 | - | 1290 | WP_001525287.1 | arsenic transporter | - |
| A7S31_RS13030 (2675517) | 2675517..2675837 | - | 321 | WP_023237793.1 | transcriptional regulator | - |
| A7S31_RS13035 (2675923) | 2675923..2676621 | + | 699 | WP_001525283.1 | arsenical resistance protein ArsH | - |
| A7S31_RS13045 (2676714) | 2676714..2676955 | + | 242 | Protein_2565 | hypothetical protein | - |
| A7S31_RS13050 (2677024) | 2677024..2677695 | + | 672 | WP_001525273.1 | SOS response-associated peptidase | - |
| A7S31_RS13055 (2677688) | 2677688..2678956 | - | 1269 | WP_001525281.1 | Y-family DNA polymerase | - |
| A7S31_RS13060 (2678959) | 2678959..2679378 | - | 420 | WP_001525275.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A7S31_RS13065 (2679549) | 2679549..2679770 | - | 222 | Protein_2569 | recombinase family protein | - |
| A7S31_RS13070 (2679980) | 2679980..2680702 | + | 723 | WP_044811092.1 | hypothetical protein | VF |
| A7S31_RS13075 (2680899) | 2680899..2681480 | - | 582 | WP_000143178.1 | tail fiber assembly protein | - |
| A7S31_RS13080 (2681480) | 2681480..2682142 | - | 663 | Protein_2572 | phage tail protein | - |
| A7S31_RS13085 (2682139) | 2682139..2682468 | - | 330 | Protein_2573 | HK97 family phage prohead protease | - |
| A7S31_RS13090 (2682446) | 2682446..2683687 | - | 1242 | WP_058671848.1 | phage portal protein | - |
| A7S31_RS13095 (2683687) | 2683687..2683869 | - | 183 | WP_000605609.1 | protein YmfR | - |
| A7S31_RS13100 (2683881) | 2683881..2684033 | - | 153 | Protein_2576 | hypothetical protein | - |
| A7S31_RS13105 (2684031) | 2684031..2684165 | - | 135 | Protein_2577 | DUF2570 domain-containing protein | - |
| A7S31_RS13110 (2684161) | 2684161..2684241 | - | 81 | Protein_2578 | lysozyme | - |
| A7S31_RS13115 (2684245) | 2684245..2684580 | - | 336 | WP_023219695.1 | phage holin, lambda family | - |
| A7S31_RS13120 (2684877) | 2684877..2686208 | + | 1332 | WP_001525524.1 | P-loop NTPase fold protein | - |
| A7S31_RS13125 (2686237) | 2686237..2686605 | - | 369 | WP_010989045.1 | antiterminator Q family protein | - |
| A7S31_RS13130 (2686620) | 2686620..2687246 | - | 627 | Protein_2582 | DUF968 domain-containing protein | - |
| A7S31_RS13135 (2687357) | 2687357..2688028 | + | 672 | WP_000334552.1 | SOS response-associated peptidase | - |
| A7S31_RS23395 (2687995) | 2687995..2688093 | - | 99 | WP_232048298.1 | hypothetical protein | - |
| A7S31_RS13145 (2688348) | 2688348..2690450 | - | 2103 | WP_000481981.1 | hypothetical protein | VF |
| A7S31_RS13150 (2690622) | 2690622..2691647 | - | 1026 | Protein_2586 | IS481 family transposase ISErsp1 | Transposase |
| A7S31_RS23400 (2691980) | 2691980..2692105 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| A7S31_RS23405 (2692105) | 2692105..2692286 | + | 182 | Protein_2588 | IS3 family transposase | - |
| A7S31_RS13155 (2692676) | 2692676..2692876 | + | 201 | WP_033578003.1 | phage virulence factor PagK family protein | - |
| A7S31_RS13160 (2692973) | 2692973..2693383 | - | 411 | WP_001525515.1 | tail fiber assembly protein | - |
| A7S31_RS13165 (2693390) | 2693390..2693488 | - | 99 | Protein_2591 | phage tail protein | - |
| A7S31_RS13170 (2693490) | 2693490..2694812 | - | 1323 | Protein_2592 | DNA circularization N-terminal domain-containing protein | - |
| A7S31_RS13175 (2694846) | 2694846..2695247 | - | 402 | WP_001525519.1 | hypothetical protein | - |
| A7S31_RS13180 (2695253) | 2695253..2695528 | - | 276 | Protein_2594 | phage tail tube protein | - |
| A7S31_RS13185 (2695528) | 2695528..2695743 | - | 216 | Protein_2595 | phage tail protein | - |
| A7S31_RS13190 (2695736) | 2695736..2696260 | - | 525 | Protein_2596 | helix-turn-helix domain-containing protein | - |
| A7S31_RS13195 (2696257) | 2696257..2696481 | - | 225 | WP_000620702.1 | hypothetical protein | - |
| A7S31_RS23410 (2696478) | 2696478..2697476 | - | 999 | WP_237703493.1 | Rha family phage regulatory protein | - |
| A7S31_RS23415 (2697441) | 2697441..2697671 | + | 231 | WP_108429764.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A7S31_RS23420 (2697661) | 2697661..2697969 | + | 309 | WP_000147078.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| A7S31_RS23425 (2697988) | 2697988..2698164 | - | 177 | WP_001525520.1 | DUF4222 domain-containing protein | - |
| A7S31_RS13205 (2698304) | 2698304..2698858 | - | 555 | WP_000509733.1 | YmfL family putative regulatory protein | - |
| A7S31_RS13210 (2698887) | 2698887..2699111 | - | 225 | WP_001191666.1 | helix-turn-helix transcriptional regulator | - |
| A7S31_RS13215 (2699209) | 2699209..2699904 | + | 696 | WP_058671845.1 | helix-turn-helix transcriptional regulator | - |
| A7S31_RS13220 (2700113) | 2700113..2700421 | + | 309 | WP_023262052.1 | hypothetical protein | - |
| A7S31_RS13225 (2700359) | 2700359..2700697 | - | 339 | WP_071586821.1 | hypothetical protein | - |
| A7S31_RS23430 (2700894) | 2700894..2701025 | + | 132 | Protein_2607 | hypothetical protein | - |
| A7S31_RS13230 (2701065) | 2701065..2701301 | + | 237 | Protein_2608 | hypothetical protein | - |
| A7S31_RS13235 (2701359) | 2701359..2702186 | + | 828 | WP_070810915.1 | DUF2303 family protein | - |
| A7S31_RS13240 (2702323) | 2702323..2702862 | + | 540 | WP_000008352.1 | hypothetical protein | - |
| A7S31_RS13245 (2703005) | 2703005..2703241 | + | 237 | WP_000089141.1 | excisionase | - |
| A7S31_RS13250 (2703231) | 2703231..2704373 | + | 1143 | WP_000741325.1 | hypothetical protein ; Integrase | Integrase |
| A7S31_RS13255 (2704487) | 2704487..2705737 | - | 1251 | WP_000444507.1 | NADP-dependent isocitrate dehydrogenase | - |
| A7S31_RS13260 (2705909) | 2705909..2706574 | + | 666 | WP_001249412.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| A7S31_RS13265 (2706571) | 2706571..2706900 | + | 330 | WP_001525321.1 | lysozyme inhibitor LprI family protein | - |
| A7S31_RS13270 (2706912) | 2706912..2707373 | + | 462 | WP_000476069.1 | NUDIX hydrolase | - |
| A7S31_RS13275 (2707427) | 2707427..2708533 | + | 1107 | WP_001525316.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| A7S31_RS13280 (2708620) | 2708620..2709261 | + | 642 | WP_001519653.1 | high frequency lysogenization protein HflD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|