MGE detailed information
MGE type: Prophage MGE length: 53071 bp
Accession: NZ_CP075132 Location: 1958331..2011401 Organism: Salmonella enterica subsp. enterica serovar Inverness strain CFSAN044911 Replicon: chromosome
Accession: NZ_CP075132 Location: 1958331..2011401 Organism: Salmonella enterica subsp. enterica serovar Inverness strain CFSAN044911 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7S33_RS09880 (1953392) | 1953392..1953502 | - | 111 | Protein_1956 | tail fiber assembly protein | - |
| A7S33_RS09885 (1954221) | 1954221..1954922 | + | 702 | WP_000480002.1 | T3SS effector NleG family protein | - |
| A7S33_RS25180 (1955199) | 1955199..1955345 | - | 147 | Protein_1958 | hypothetical protein | - |
| A7S33_RS09890 (1955678) | 1955678..1955811 | - | 134 | Protein_1959 | tail fiber assembly protein | - |
| A7S33_RS09895 (1956153) | 1956153..1956365 | + | 213 | WP_001093795.1 | hypothetical protein | - |
| A7S33_RS09900 (1956362) | 1956362..1956763 | + | 402 | WP_000842530.1 | hypothetical protein | - |
| A7S33_RS09905 (1956824) | 1956824..1956937 | + | 114 | WP_125468752.1 | YnaM/YnfT family protein | - |
| A7S33_RS09910 (1957011) | 1957011..1957244 | + | 234 | WP_000836775.1 | cold shock protein YdfK | - |
| A7S33_RS09915 (1957519) | 1957519..1958160 | + | 642 | WP_023219780.1 | glutathione S-transferase family protein | - |
| A7S33_RS09920 (1958331) | 1958331..1958849 | - | 519 | WP_023228228.1 | tail fiber assembly protein | - |
| A7S33_RS09925 (1958864) | 1958864..1961545 | - | 2682 | WP_023228229.1 | prophage tail fiber N-terminal domain-containing protein | - |
| A7S33_RS09930 (1961601) | 1961601..1961837 | - | 237 | WP_001533254.1 | hypothetical protein | - |
| A7S33_RS09935 (1961882) | 1961882..1965244 | - | 3363 | WP_070810304.1 | host specificity protein J | - |
| A7S33_RS09940 (1965306) | 1965306..1965953 | - | 648 | WP_000246124.1 | tail assembly protein | - |
| A7S33_RS09945 (1965851) | 1965851..1966588 | - | 738 | WP_000662736.1 | C40 family peptidase | - |
| A7S33_RS09950 (1966595) | 1966595..1967293 | - | 699 | WP_001156291.1 | phage minor tail protein L | - |
| A7S33_RS09955 (1967303) | 1967303..1967632 | - | 330 | WP_000447370.1 | phage tail protein | - |
| A7S33_RS09960 (1967635) | 1967635..1970730 | - | 3096 | WP_001623563.1 | phage tail tape measure protein | - |
| A7S33_RS09965 (1970702) | 1970702..1971040 | - | 339 | WP_010989052.1 | phage tail assembly protein T | - |
| A7S33_RS09970 (1971037) | 1971037..1971432 | - | 396 | WP_000479607.1 | phage minor tail protein G | - |
| A7S33_RS09975 (1971483) | 1971483..1972229 | - | 747 | WP_000971954.1 | phage tail tube protein | - |
| A7S33_RS09980 (1972237) | 1972237..1972638 | - | 402 | WP_000033885.1 | phage minor tail U family protein | - |
| A7S33_RS09985 (1972635) | 1972635..1973213 | - | 579 | WP_000677089.1 | phage tail protein | - |
| A7S33_RS09990 (1973322) | 1973322..1974452 | + | 1131 | WP_000817265.1 | IS200-IS605 family transposase ISEc42 | Transposase |
| A7S33_RS09995 (1974485) | 1974485..1974868 | - | 384 | WP_000083292.1 | head-tail joining protein | - |
| A7S33_RS10000 (1974879) | 1974879..1975244 | - | 366 | WP_000201485.1 | DNA-packaging protein FI | - |
| A7S33_RS10005 (1975302) | 1975302..1976330 | - | 1029 | WP_001623560.1 | major capsid protein | - |
| A7S33_RS10010 (1976385) | 1976385..1976732 | - | 348 | WP_000011260.1 | head decoration protein | - |
| A7S33_RS10015 (1976745) | 1976745..1978241 | - | 1497 | WP_023226259.1 | S49 family peptidase | - |
| A7S33_RS10020 (1978231) | 1978231..1979811 | - | 1581 | WP_001623362.1 | phage portal protein | - |
| A7S33_RS10025 (1979808) | 1979808..1980011 | - | 204 | WP_000201415.1 | gpW family protein | - |
| A7S33_RS10030 (1979995) | 1979995..1981926 | - | 1932 | WP_023226258.1 | phage terminase large subunit family protein | - |
| A7S33_RS10035 (1981898) | 1981898..1982443 | - | 546 | WP_001102152.1 | terminase small subunit | - |
| A7S33_RS10040 (1982702) | 1982702..1983205 | - | 504 | WP_031622290.1 | hypothetical protein | - |
| A7S33_RS10045 (1983308) | 1983308..1983850 | - | 543 | WP_023227960.1 | DUF2514 family protein | - |
| A7S33_RS10050 (1983847) | 1983847..1984461 | - | 615 | WP_023227959.1 | glycoside hydrolase family 19 protein | - |
| A7S33_RS10055 (1984464) | 1984464..1984805 | - | 342 | WP_001623358.1 | phage holin, lambda family | - |
| A7S33_RS10065 (1985979) | 1985979..1986372 | + | 394 | Protein_1993 | hypothetical protein | - |
| A7S33_RS10070 (1986415) | 1986415..1986603 | - | 189 | WP_001624514.1 | hypothetical protein | - |
| A7S33_RS10075 (1987106) | 1987106..1987939 | - | 834 | WP_024148263.1 | CPBP family intramembrane metalloprotease | - |
| A7S33_RS10080 (1988232) | 1988232..1989035 | - | 804 | WP_023227958.1 | antitermination protein | - |
| A7S33_RS10085 (1989032) | 1989032..1989265 | - | 234 | Protein_1997 | helix-turn-helix domain-containing protein | - |
| A7S33_RS10090 (1989319) | 1989319..1990308 | - | 990 | WP_070804833.1 | DUF968 domain-containing protein | - |
| A7S33_RS10095 (1990316) | 1990316..1991176 | - | 861 | WP_023228497.1 | KilA-N domain-containing protein | - |
| A7S33_RS10100 (1991193) | 1991193..1991582 | - | 390 | WP_001529171.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A7S33_RS10105 (1991579) | 1991579..1992232 | - | 654 | WP_001624543.1 | phage N-6-adenine-methyltransferase | - |
| A7S33_RS10110 (1992232) | 1992232..1992714 | - | 483 | WP_070810381.1 | PerC family transcriptional regulator | - |
| A7S33_RS10115 (1992716) | 1992716..1993675 | - | 960 | WP_070810380.1 | helix-turn-helix domain-containing protein | - |
| A7S33_RS10120 (1993672) | 1993672..1993896 | - | 225 | WP_000620702.1 | hypothetical protein | - |
| A7S33_RS25185 (1993893) | 1993893..1994438 | - | 546 | WP_253185772.1 | Rha family transcriptional regulator | - |
| A7S33_RS25190 (1994754) | 1994754..1995527 | - | 774 | Protein_2006 | Rha family transcriptional regulator | - |
| A7S33_RS25195 (1995492) | 1995492..1995722 | + | 231 | WP_108429764.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A7S33_RS25200 (1995712) | 1995712..1996020 | + | 309 | WP_000147078.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| A7S33_RS25205 (1996039) | 1996039..1996215 | - | 177 | WP_001525520.1 | DUF4222 domain-containing protein | - |
| A7S33_RS10130 (1996355) | 1996355..1996909 | - | 555 | WP_070811212.1 | YmfL family putative regulatory protein | - |
| A7S33_RS10135 (1996938) | 1996938..1997162 | - | 225 | WP_001191666.1 | helix-turn-helix transcriptional regulator | - |
| A7S33_RS10140 (1997260) | 1997260..1997955 | + | 696 | WP_001020640.1 | helix-turn-helix transcriptional regulator | - |
| A7S33_RS10145 (1998290) | 1998290..1998487 | - | 198 | WP_001624554.1 | hypothetical protein | - |
| A7S33_RS25210 (1998683) | 1998683..1998827 | + | 145 | Protein_2014 | hypothetical protein | - |
| A7S33_RS10150 (1999026) | 1999026..1999397 | + | 372 | WP_000997190.1 | hypothetical protein | - |
| A7S33_RS10155 (1999455) | 1999455..2000282 | + | 828 | WP_058819372.1 | DUF2303 family protein | - |
| A7S33_RS10160 (2000419) | 2000419..2000958 | + | 540 | WP_000008351.1 | hypothetical protein | - |
| A7S33_RS25215 (2001029) | 2001029..2001664 | + | 636 | WP_023227855.1 | hypothetical protein | - |
| A7S33_RS10170 (2001667) | 2001667..2001954 | + | 288 | WP_024148247.1 | hypothetical protein | - |
| A7S33_RS10175 (2001958) | 2001958..2002383 | + | 426 | WP_023227853.1 | HNH endonuclease signature motif containing protein | - |
| A7S33_RS10180 (2002380) | 2002380..2002817 | + | 438 | WP_023227852.1 | hypothetical protein | - |
| A7S33_RS10185 (2002944) | 2002944..2003153 | + | 210 | WP_023227851.1 | hypothetical protein | - |
| A7S33_RS10190 (2003156) | 2003156..2004334 | + | 1179 | WP_001623414.1 | hypothetical protein ; Integrase | Integrase |
| A7S33_RS10195 (2004455) | 2004455..2005513 | + | 1059 | WP_001623413.1 | hypothetical protein | - |
| A7S33_RS25220 (2005681) | 2005681..2005779 | + | 99 | Protein_2025 | hypothetical protein | - |
| A7S33_RS10200 (2006036) | 2006036..2006258 | - | 223 | Protein_2026 | DUF4113 domain-containing protein | - |
| A7S33_RS10205 (2006346) | 2006346..2008699 | - | 2354 | Protein_2027 | E3 ubiquitin-protein ligase SspH2 | VF |
| A7S33_RS10215 (2008953) | 2008953..2009285 | - | 333 | Protein_2028 | tail fiber assembly protein | - |
| A7S33_RS10220 (2009369) | 2009369..2010160 | - | 792 | WP_024131629.1 | tail fiber protein | - |
| A7S33_RS10225 (2010289) | 2010289..2010477 | + | 189 | WP_023227850.1 | hypothetical protein | - |
| A7S33_RS10230 (2010464) | 2010464..2010652 | + | 189 | WP_001142121.1 | hypothetical protein | - |
| A7S33_RS10235 (2010844) | 2010844..2011407 | - | 564 | WP_000281877.1 | lipid A 3-O-deacylase PagL | - |
| A7S33_RS10240 (2012137) | 2012137..2012784 | + | 648 | WP_001115497.1 | nitrate/nitrite response regulator protein NarP | - |
| A7S33_RS10245 (2012828) | 2012828..2013871 | - | 1044 | WP_001238328.1 | cytochrome c-type biogenesis protein CcmH | - |
| A7S33_RS10250 (2013868) | 2013868..2014425 | - | 558 | WP_000828299.1 | thiol:disulfide interchange protein DsbE | - |
| A7S33_RS10255 (2014422) | 2014422..2016353 | - | 1932 | WP_001625168.1 | heme lyase CcmF/NrfE family subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|