MGE detailed information
MGE type: Prophage MGE length: 42019 bp
Accession: NZ_CP075127 Location: 2662709..2704727 Organism: Salmonella enterica strain CFSAN044925 Replicon: chromosome
Accession: NZ_CP075127 Location: 2662709..2704727 Organism: Salmonella enterica strain CFSAN044925 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7S47_RS12930 (2657936) | 2657936..2659570 | - | 1635 | WP_000946088.1 | ABC transporter substrate-binding protein | - |
| A7S47_RS12935 (2660252) | 2660252..2660566 | + | 315 | WP_000182479.1 | TRL-like family protein | - |
| A7S47_RS12940 (2660715) | 2660715..2661245 | + | 531 | WP_001525288.1 | cytochrome b | - |
| A7S47_RS12945 (2661327) | 2661327..2662370 | - | 1044 | WP_000761735.1 | exo-alpha-sialidase | - |
| A7S47_RS12950 (2662709) | 2662709..2663176 | - | 468 | WP_001218120.1 | Hsp20 family protein | - |
| A7S47_RS12955 (2663329) | 2663329..2663601 | - | 273 | WP_000927827.1 | hypothetical protein | - |
| A7S47_RS12960 (2663801) | 2663801..2663926 | - | 126 | WP_000758947.1 | lipoprotein | - |
| A7S47_RS12965 (2664304) | 2664304..2664648 | + | 345 | WP_000977725.1 | c-type lysozyme inhibitor | - |
| A7S47_RS12975 (2665870) | 2665870..2666427 | - | 558 | WP_000789471.1 | hypothetical protein | VF |
| A7S47_RS12980 (2667239) | 2667239..2667502 | + | 264 | WP_012664625.1 | virulence protein PagD | - |
| A7S47_RS12985 (2667634) | 2667634..2667846 | + | 213 | WP_001537306.1 | cold shock-like protein CspF | - |
| A7S47_RS12990 (2668261) | 2668261..2668782 | + | 522 | WP_001525262.1 | RICIN domain-containing protein | - |
| A7S47_RS12995 (2668973) | 2668973..2669212 | + | 240 | WP_000497451.1 | virulence protein MsgA | - |
| A7S47_RS13000 (2669702) | 2669702..2670490 | + | 789 | WP_001033398.1 | hypothetical protein | - |
| A7S47_RS23055 (2670812) | 2670812..2671039 | + | 228 | WP_000787627.1 | hypothetical protein | - |
| A7S47_RS13005 (2671474) | 2671474..2672598 | - | 1125 | WP_000917268.1 | type III secretion system effector SopF | - |
| A7S47_RS13010 (2673046) | 2673046..2673216 | - | 171 | Protein_2559 | isocitrate/isopropylmalate family dehydrogenase | - |
| A7S47_RS13015 (2673365) | 2673365..2673706 | + | 342 | WP_223231758.1 | hypothetical protein | - |
| A7S47_RS13020 (2674099) | 2674099..2674524 | - | 426 | WP_001525274.1 | glutaredoxin-dependent arsenate reductase | - |
| A7S47_RS13025 (2674537) | 2674537..2675826 | - | 1290 | WP_001525287.1 | arsenic transporter | - |
| A7S47_RS13030 (2675871) | 2675871..2676191 | - | 321 | WP_023237793.1 | transcriptional regulator | - |
| A7S47_RS13035 (2676277) | 2676277..2676975 | + | 699 | WP_001525283.1 | arsenical resistance protein ArsH | - |
| A7S47_RS13045 (2677068) | 2677068..2677309 | + | 242 | Protein_2565 | hypothetical protein | - |
| A7S47_RS13050 (2677378) | 2677378..2678049 | + | 672 | WP_001525273.1 | SOS response-associated peptidase | - |
| A7S47_RS13055 (2678042) | 2678042..2679310 | - | 1269 | WP_001525281.1 | Y-family DNA polymerase | - |
| A7S47_RS13060 (2679313) | 2679313..2679732 | - | 420 | WP_001525275.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A7S47_RS13065 (2679903) | 2679903..2680124 | - | 222 | Protein_2569 | recombinase family protein | - |
| A7S47_RS13070 (2680334) | 2680334..2681056 | + | 723 | WP_044811092.1 | hypothetical protein | VF |
| A7S47_RS13075 (2681253) | 2681253..2681834 | - | 582 | WP_000143178.1 | tail fiber assembly protein | - |
| A7S47_RS13080 (2681834) | 2681834..2682496 | - | 663 | Protein_2572 | phage tail protein | - |
| A7S47_RS13085 (2682493) | 2682493..2682822 | - | 330 | Protein_2573 | HK97 family phage prohead protease | - |
| A7S47_RS13090 (2682800) | 2682800..2684041 | - | 1242 | WP_058671848.1 | phage portal protein | - |
| A7S47_RS13095 (2684041) | 2684041..2684223 | - | 183 | WP_000605609.1 | protein YmfR | - |
| A7S47_RS13100 (2684235) | 2684235..2684387 | - | 153 | Protein_2576 | hypothetical protein | - |
| A7S47_RS13105 (2684385) | 2684385..2684519 | - | 135 | Protein_2577 | DUF2570 domain-containing protein | - |
| A7S47_RS13110 (2684515) | 2684515..2684595 | - | 81 | Protein_2578 | lysozyme | - |
| A7S47_RS13115 (2684599) | 2684599..2684934 | - | 336 | WP_023219695.1 | phage holin, lambda family | - |
| A7S47_RS13120 (2685231) | 2685231..2686562 | + | 1332 | WP_001525524.1 | P-loop NTPase fold protein | - |
| A7S47_RS13125 (2686591) | 2686591..2686959 | - | 369 | WP_010989045.1 | antiterminator Q family protein | - |
| A7S47_RS13130 (2686974) | 2686974..2687600 | - | 627 | Protein_2582 | DUF968 domain-containing protein | - |
| A7S47_RS13135 (2687711) | 2687711..2688382 | + | 672 | WP_000334552.1 | SOS response-associated peptidase | - |
| A7S47_RS23060 (2688349) | 2688349..2688447 | - | 99 | WP_232048298.1 | hypothetical protein | - |
| A7S47_RS13145 (2688702) | 2688702..2690804 | - | 2103 | WP_000481981.1 | hypothetical protein | VF |
| A7S47_RS13150 (2690976) | 2690976..2692001 | - | 1026 | Protein_2586 | IS481 family transposase ISErsp1 | Transposase |
| A7S47_RS23065 (2692334) | 2692334..2692459 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| A7S47_RS23070 (2692459) | 2692459..2692640 | + | 182 | Protein_2588 | IS3 family transposase | - |
| A7S47_RS13155 (2693030) | 2693030..2693230 | + | 201 | WP_033578003.1 | phage virulence factor PagK family protein | - |
| A7S47_RS13160 (2693327) | 2693327..2693737 | - | 411 | WP_001525515.1 | tail fiber assembly protein | - |
| A7S47_RS13165 (2693744) | 2693744..2693842 | - | 99 | Protein_2591 | phage tail protein | - |
| A7S47_RS13170 (2693844) | 2693844..2695166 | - | 1323 | Protein_2592 | DNA circularization N-terminal domain-containing protein | - |
| A7S47_RS13175 (2695200) | 2695200..2695601 | - | 402 | WP_001525519.1 | hypothetical protein | - |
| A7S47_RS13180 (2695607) | 2695607..2695882 | - | 276 | Protein_2594 | phage tail tube protein | - |
| A7S47_RS13185 (2695882) | 2695882..2696097 | - | 216 | Protein_2595 | phage tail protein | - |
| A7S47_RS13190 (2696090) | 2696090..2696614 | - | 525 | Protein_2596 | helix-turn-helix domain-containing protein | - |
| A7S47_RS13195 (2696611) | 2696611..2696835 | - | 225 | WP_000620702.1 | hypothetical protein | - |
| A7S47_RS23075 (2696832) | 2696832..2697830 | - | 999 | WP_237703493.1 | Rha family phage regulatory protein | - |
| A7S47_RS23080 (2697795) | 2697795..2698025 | + | 231 | WP_108429764.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A7S47_RS23085 (2698015) | 2698015..2698323 | + | 309 | WP_000147078.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| A7S47_RS23090 (2698342) | 2698342..2698518 | - | 177 | WP_001525520.1 | DUF4222 domain-containing protein | - |
| A7S47_RS13205 (2698658) | 2698658..2699212 | - | 555 | WP_000509733.1 | YmfL family putative regulatory protein | - |
| A7S47_RS13210 (2699241) | 2699241..2699465 | - | 225 | WP_001191666.1 | helix-turn-helix transcriptional regulator | - |
| A7S47_RS13215 (2699563) | 2699563..2700258 | + | 696 | WP_058671845.1 | helix-turn-helix transcriptional regulator | - |
| A7S47_RS13220 (2700467) | 2700467..2700775 | + | 309 | WP_023262052.1 | hypothetical protein | - |
| A7S47_RS13225 (2700713) | 2700713..2701051 | - | 339 | WP_071586821.1 | hypothetical protein | - |
| A7S47_RS23095 (2701248) | 2701248..2701379 | + | 132 | Protein_2607 | hypothetical protein | - |
| A7S47_RS13230 (2701419) | 2701419..2701655 | + | 237 | Protein_2608 | hypothetical protein | - |
| A7S47_RS13235 (2701713) | 2701713..2702540 | + | 828 | WP_001525327.1 | DUF2303 family protein | - |
| A7S47_RS13240 (2702677) | 2702677..2703216 | + | 540 | WP_000008352.1 | hypothetical protein | - |
| A7S47_RS13245 (2703359) | 2703359..2703595 | + | 237 | WP_000089141.1 | excisionase | - |
| A7S47_RS13250 (2703585) | 2703585..2704727 | + | 1143 | WP_000741325.1 | hypothetical protein ; Integrase | Integrase |
| A7S47_RS13255 (2704841) | 2704841..2706091 | - | 1251 | WP_000444507.1 | NADP-dependent isocitrate dehydrogenase | - |
| A7S47_RS13260 (2706263) | 2706263..2706928 | + | 666 | WP_001249412.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| A7S47_RS13265 (2706925) | 2706925..2707254 | + | 330 | WP_001525321.1 | lysozyme inhibitor LprI family protein | - |
| A7S47_RS13270 (2707266) | 2707266..2707727 | + | 462 | WP_000476069.1 | NUDIX hydrolase | - |
| A7S47_RS13275 (2707781) | 2707781..2708887 | + | 1107 | WP_001525316.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| A7S47_RS13280 (2708974) | 2708974..2709615 | + | 642 | WP_001519653.1 | high frequency lysogenization protein HflD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|