MGE detailed information
MGE type: Prophage MGE length: 57576 bp
Accession: NZ_CP075127 Location: 1993623..2051198 Organism: Salmonella enterica strain CFSAN044925 Replicon: chromosome
Accession: NZ_CP075127 Location: 1993623..2051198 Organism: Salmonella enterica strain CFSAN044925 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7S47_RS09525 () | 1988998..1989519 | + | 522 | WP_000022510.1 | crossover junction endodeoxyribonuclease RuvC | - |
| A7S47_RS09530 () | 1989550..1991046 | + | 1497 | WP_001524384.1 | substrate-binding domain-containing protein | - |
| A7S47_RS09535 () | 1991146..1991742 | - | 597 | WP_000716751.1 | YebB family permuted papain-like enzyme | - |
| A7S47_RS09540 () | 1991951..1992643 | + | 693 | Protein_1870 | hypothetical protein | - |
| A7S47_RS09545 () | 1993003..1993614 | + | 612 | WP_001524365.1 | Holliday junction branch migration protein RuvA | - |
| A7S47_RS09550 () | 1993623..1994633 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| A7S47_RS09555 () | 1994712..1995497 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| A7S47_RS09560 () | 1995494..1996249 | - | 756 | WP_000203013.1 | hypothetical protein | VF |
| A7S47_RS09565 () | 1996328..1997272 | + | 945 | WP_001524350.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| A7S47_RS09570 () | 1997288..1998607 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| A7S47_RS09575 () | 1998724..1999695 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| A7S47_RS09580 () | 1999768..2001210 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| A7S47_RS09585 () | 2001334..2002203 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| A7S47_RS09590 () | 2002545..2004020 | + | 1476 | WP_001524359.1 | glucose-6-phosphate dehydrogenase | - |
| A7S47_RS09595 () | 2004255..2006066 | + | 1812 | WP_001524363.1 | phosphogluconate dehydratase | - |
| A7S47_RS09600 () | 2006104..2006745 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| A7S47_RS09605 () | 2006845..2008023 | - | 1179 | WP_001524392.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| A7S47_RS09610 () | 2008154..2008444 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| A7S47_RS09615 () | 2008512..2008865 | + | 354 | WP_001042123.1 | protein YebF | - |
| A7S47_RS09620 () | 2008959..2009618 | + | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| A7S47_RS09625 () | 2009832..2011883 | + | 2052 | WP_000936997.1 | oligopeptidase B | - |
| A7S47_RS09630 () | 2011918..2012616 | - | 699 | WP_000944278.1 | exodeoxyribonuclease X | - |
| A7S47_RS09635 () | 2012640..2013296 | - | 657 | WP_001524390.1 | carbon-nitrogen hydrolase family protein | - |
| A7S47_RS09640 () | 2013404..2013634 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| A7S47_RS09645 () | 2013772..2014146 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| A7S47_RS09650 () | 2014147..2015022 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| A7S47_RS09655 () | 2015039..2015392 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2015494..2015648 | - | 155 | - | - | Antitoxin Detail |
| - | 2015532..2015635 | + | 104 | - | - | Toxin Detail |
| A7S47_RS09660 () | 2015766..2016845 | - | 1080 | WP_001525019.1 | hypothetical protein ; Integrase | Integrase |
| A7S47_RS09665 () | 2016878..2018029 | - | 1152 | Protein_1895 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| A7S47_RS09670 () | 2018018..2018209 | + | 192 | Protein_1896 | glycoside hydrolase family 19 protein | - |
| A7S47_RS09675 () | 2018263..2018796 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| A7S47_RS09680 () | 2019053..2019220 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| A7S47_RS09685 () | 2019285..2019473 | - | 189 | WP_001525026.1 | hypothetical protein | - |
| A7S47_RS09690 () | 2019528..2020019 | + | 492 | WP_001525042.1 | DUF1441 family protein | - |
| A7S47_RS09695 () | 2020006..2020573 | + | 568 | Protein_1901 | phage terminase large subunit family protein | - |
| A7S47_RS23000 () | 2020572..2021803 | + | 1232 | Protein_1902 | tail fiber protein | - |
| A7S47_RS23005 () | 2021813..2022100 | + | 288 | Protein_1903 | macro domain-containing protein | - |
| A7S47_RS23010 () | 2022113..2022624 | + | 512 | Protein_1904 | tail fiber assembly protein | - |
| A7S47_RS09705 () | 2022721..2022921 | - | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| A7S47_RS23015 () | 2023311..2023491 | - | 181 | Protein_1906 | IS3 family transposase | - |
| A7S47_RS09710 () | 2023482..2023583 | + | 102 | Protein_1907 | arsenic transporter | - |
| A7S47_RS23020 () | 2024205..2024437 | + | 233 | Protein_1908 | helix-turn-helix domain-containing protein | - |
| A7S47_RS09720 () | 2024764..2025378 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| A7S47_RS09725 () | 2025388..2025546 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| A7S47_RS09730 () | 2025679..2026593 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| A7S47_RS09735 () | 2027384..2028004 | - | 621 | Protein_1912 | fimbrial protein | - |
| A7S47_RS23025 () | 2027937..2028113 | + | 177 | Protein_1913 | DUF4113 domain-containing protein | - |
| A7S47_RS09745 () | 2028529..2028951 | - | 423 | Protein_1914 | tyrosine-type recombinase/integrase | - |
| A7S47_RS09750 () | 2029021..2030229 | + | 1209 | WP_001525040.1 | IS256 family transposase ISEc39 | Transposase |
| A7S47_RS09755 () | 2030375..2030515 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| A7S47_RS09760 () | 2030681..2030950 | - | 270 | WP_011233024.1 | hypothetical protein | - |
| A7S47_RS09765 () | 2031321..2031740 | + | 420 | WP_020898853.1 | GNAT family N-acetyltransferase | - |
| A7S47_RS09770 () | 2032127..2032603 | - | 477 | WP_001525028.1 | hypothetical protein | - |
| A7S47_RS09775 () | 2032933..2033328 | - | 396 | WP_023200657.1 | DUF1398 domain-containing protein | - |
| A7S47_RS09780 () | 2034012..2034734 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| A7S47_RS09785 () | 2035019..2035183 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| A7S47_RS09790 () | 2035407..2036057 | + | 651 | WP_000986174.1 | protein-serine/threonine phosphatase | - |
| A7S47_RS09795 () | 2036076..2036267 | - | 192 | WP_000457836.1 | YebW family protein | - |
| A7S47_RS09800 () | 2036378..2036614 | - | 237 | WP_024131167.1 | YebV family protein | - |
| A7S47_RS09805 () | 2036732..2038171 | - | 1440 | WP_001525006.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| A7S47_RS09810 () | 2038249..2040882 | - | 2634 | WP_001521100.1 | hypothetical protein | VF |
| A7S47_RS09815 () | 2040851..2042134 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| A7S47_RS09820 () | 2042263..2042760 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| A7S47_RS09825 () | 2042858..2043544 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| A7S47_RS09830 () | 2043564..2045612 | + | 2049 | WP_001525059.1 | carboxy terminal-processing peptidase | - |
| A7S47_RS09835 () | 2045805..2046686 | + | 882 | WP_000984498.1 | protease HtpX | - |
| A7S47_RS09840 () | 2046734..2048107 | - | 1374 | WP_043986574.1 | MFS transporter | - |
| A7S47_RS09845 () | 2048283..2049074 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| A7S47_RS09850 () | 2049286..2049525 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| A7S47_RS09855 () | 2049683..2049826 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| A7S47_RS09860 () | 2049897..2050184 | + | 288 | WP_001000660.1 | YebO family protein | - |
| A7S47_RS09865 () | 2050833..2050976 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| A7S47_RS09870 () | 2050989..2051198 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| A7S47_RS09875 () | 2051418..2053163 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| A7S47_RS09880 () | 2053229..2054038 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| A7S47_RS09885 () | 2054035..2054601 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| A7S47_RS09890 () | 2055011..2055469 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|