MGE detailed information
MGE type: Prophage MGE length: 55187 bp
Accession: NZ_CP075115 Location: 1903228..1958414 Organism: Salmonella enterica subsp. enterica serovar Eastbourne strain CFSAN059883 Replicon: chromosome
Accession: NZ_CP075115 Location: 1903228..1958414 Organism: Salmonella enterica subsp. enterica serovar Eastbourne strain CFSAN059883 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCO38_RS09050 () | 1898966..1899418 | + | 453 | WP_023213138.1 | dihydroneopterin triphosphate diphosphatase | - |
| CCO38_RS09055 () | 1899448..1900188 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CCO38_RS09060 () | 1900225..1900746 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CCO38_RS09065 () | 1900748..1901347 | - | 600 | WP_000716739.1 | YebB family permuted papain-like enzyme | - |
| CCO38_RS09070 () | 1901558..1902250 | + | 693 | WP_023233028.1 | hypothetical protein | - |
| CCO38_RS09075 () | 1902608..1903219 | + | 612 | WP_000580333.1 | Holliday junction branch migration protein RuvA | - |
| CCO38_RS09080 () | 1903228..1904238 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CCO38_RS09085 () | 1904317..1905102 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| CCO38_RS09090 () | 1905099..1905854 | - | 756 | WP_023233027.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CCO38_RS09095 () | 1905933..1906877 | + | 945 | WP_023233026.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CCO38_RS09100 () | 1906893..1908212 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| CCO38_RS09105 () | 1908329..1909300 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CCO38_RS09110 () | 1909373..1910815 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| CCO38_RS09115 () | 1910939..1911808 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| CCO38_RS09120 () | 1912150..1913625 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| CCO38_RS09125 () | 1913860..1915671 | + | 1812 | WP_001069111.1 | phosphogluconate dehydratase | - |
| CCO38_RS09130 () | 1915709..1916350 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CCO38_RS09135 () | 1916450..1917628 | - | 1179 | WP_000173436.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CCO38_RS09140 () | 1917759..1918049 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| CCO38_RS09145 () | 1918117..1918470 | + | 354 | WP_001042123.1 | protein YebF | - |
| CCO38_RS09150 () | 1918564..1919223 | + | 660 | WP_000024703.1 | tellurite resistance TerB family protein | - |
| CCO38_RS09155 () | 1919436..1921487 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| CCO38_RS09160 () | 1921524..1922222 | - | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| CCO38_RS09165 () | 1922246..1922902 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| CCO38_RS09170 () | 1923010..1923240 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| CCO38_RS09175 () | 1923378..1923752 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| CCO38_RS09180 () | 1923753..1924628 | + | 876 | WP_000979695.1 | copper homeostasis membrane protein CopD | - |
| CCO38_RS09185 () | 1924645..1924998 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 1925100..1925243 | - | 144 | - | - | Antitoxin Detail |
| - | 1925138..1925241 | + | 104 | - | - | Toxin Detail |
| CCO38_RS09190 () | 1925372..1926295 | - | 924 | Protein_1798 | hypothetical protein ; Integrase | Integrase |
| CCO38_RS21950 () | 1926559..1927017 | - | 459 | Protein_1799 | DNA breaking-rejoining protein | - |
| CCO38_RS09200 () | 1927009..1927257 | + | 249 | Protein_1800 | glycoside hydrolase family 19 protein | - |
| CCO38_RS09205 () | 1927254..1927787 | + | 534 | WP_001529209.1 | DUF2514 domain-containing protein | - |
| CCO38_RS09210 () | 1928044..1928211 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| CCO38_RS09215 () | 1928514..1929005 | + | 492 | WP_023233022.1 | DUF1441 family protein | - |
| CCO38_RS09220 () | 1928992..1929559 | + | 568 | Protein_1804 | phage terminase large subunit family protein | - |
| CCO38_RS21955 () | 1929558..1930790 | + | 1233 | Protein_1805 | tail fiber protein | - |
| CCO38_RS21960 () | 1930800..1931087 | + | 288 | Protein_1806 | macro domain-containing protein | - |
| CCO38_RS21965 () | 1931100..1931611 | + | 512 | Protein_1807 | tail fiber assembly protein | - |
| CCO38_RS09230 () | 1931708..1931908 | - | 201 | WP_031603924.1 | PagK family vesicle-borne virulence factor | - |
| CCO38_RS21970 () | 1932298..1932478 | - | 181 | Protein_1809 | IS3 family transposase | - |
| CCO38_RS09235 () | 1932469..1932570 | + | 102 | Protein_1810 | arsenic transporter | - |
| CCO38_RS21975 () | 1933192..1933424 | + | 233 | Protein_1811 | helix-turn-helix domain-containing protein | - |
| CCO38_RS09245 () | 1933751..1934365 | - | 615 | WP_023232847.1 | disulfide bond formation protein B | - |
| CCO38_RS09250 () | 1934375..1934533 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| CCO38_RS09255 () | 1934666..1935580 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| CCO38_RS09260 () | 1936372..1937019 | - | 648 | Protein_1815 | fimbrial protein | - |
| CCO38_RS09265 () | 1937087..1937446 | + | 360 | Protein_1816 | IS256 family transposase ISEc39 | Transposase |
| CCO38_RS09270 () | 1937592..1937732 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| CCO38_RS09275 () | 1937898..1938167 | - | 270 | WP_001611547.1 | hypothetical protein | - |
| CCO38_RS09280 () | 1938536..1938955 | + | 420 | WP_000354400.1 | GNAT family N-acetyltransferase | - |
| CCO38_RS09285 () | 1939343..1939819 | - | 477 | WP_023232849.1 | hypothetical protein | - |
| CCO38_RS09290 () | 1940148..1940543 | - | 396 | WP_000422887.1 | DUF1398 domain-containing protein | - |
| CCO38_RS09295 () | 1941227..1941949 | + | 723 | WP_000182069.1 | hypothetical protein | VF |
| CCO38_RS09300 () | 1942234..1942398 | + | 165 | WP_001134850.1 | hypothetical protein | - |
| CCO38_RS09305 () | 1942623..1943273 | + | 651 | WP_000986166.1 | protein-serine/threonine phosphatase | - |
| CCO38_RS09310 () | 1943292..1943483 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| CCO38_RS09315 () | 1943594..1943830 | - | 237 | WP_024131167.1 | YebV family protein | - |
| CCO38_RS09320 () | 1943948..1945387 | - | 1440 | WP_001633706.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CCO38_RS09325 () | 1945465..1948098 | - | 2634 | WP_001530909.1 | hypothetical protein | VF |
| CCO38_RS09330 () | 1948067..1949350 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| CCO38_RS09335 () | 1949479..1949976 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| CCO38_RS09340 () | 1950074..1950760 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| CCO38_RS09345 () | 1950780..1952828 | + | 2049 | WP_001091241.1 | carboxy terminal-processing peptidase | - |
| CCO38_RS09350 () | 1953021..1953902 | + | 882 | WP_000984498.1 | protease HtpX | - |
| CCO38_RS09355 () | 1953950..1955323 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| CCO38_RS09360 () | 1955499..1956290 | + | 792 | WP_001262196.1 | DNA-binding transcriptional regulator KdgR | - |
| CCO38_RS09365 () | 1956502..1956741 | - | 240 | WP_001236778.1 | invasion protein YobH | - |
| CCO38_RS09370 () | 1956899..1957042 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| CCO38_RS09375 () | 1957113..1957400 | + | 288 | WP_001000660.1 | YebO family protein | - |
| CCO38_RS09380 () | 1958049..1958192 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| CCO38_RS09385 () | 1958205..1958414 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CCO38_RS09390 () | 1958634..1960379 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| CCO38_RS09395 () | 1960445..1961254 | + | 810 | WP_023232851.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CCO38_RS09400 () | 1961251..1961817 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| CCO38_RS09405 () | 1962227..1962685 | - | 459 | WP_000156284.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|