MGE detailed information
MGE type: Prophage MGE length: 55006 bp
Accession: NZ_CP075110 Location: 1971299..2026304 Organism: Salmonella enterica strain CFSAN060804 Replicon: chromosome
Accession: NZ_CP075110 Location: 1971299..2026304 Organism: Salmonella enterica strain CFSAN060804 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIC27_RS09485 () | 1967038..1967490 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| CIC27_RS09490 () | 1967520..1968260 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CIC27_RS09495 () | 1968297..1968818 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CIC27_RS09500 () | 1968820..1969419 | - | 600 | Protein_1871 | YebB family permuted papain-like enzyme | - |
| CIC27_RS09505 () | 1969628..1970320 | + | 693 | WP_023230996.1 | hypothetical protein | - |
| CIC27_RS09510 () | 1970679..1971290 | + | 612 | WP_000580333.1 | Holliday junction branch migration protein RuvA | - |
| CIC27_RS09515 () | 1971299..1972309 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| CIC27_RS09520 () | 1972388..1973173 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| CIC27_RS09525 () | 1973170..1973925 | - | 756 | WP_000203013.1 | hypothetical protein | VF |
| CIC27_RS09530 () | 1974004..1974948 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CIC27_RS09535 () | 1974964..1976283 | + | 1320 | WP_097361691.1 | murein DD-endopeptidase MepM | - |
| CIC27_RS09540 () | 1976400..1977371 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| CIC27_RS09545 () | 1977444..1978886 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| CIC27_RS09550 () | 1979010..1979879 | - | 870 | WP_023972077.1 | MurR/RpiR family transcriptional regulator | - |
| CIC27_RS09555 () | 1980221..1981696 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| CIC27_RS09560 () | 1981931..1983742 | + | 1812 | WP_001069118.1 | phosphogluconate dehydratase | - |
| CIC27_RS09565 () | 1983780..1984421 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CIC27_RS09570 () | 1984521..1985699 | - | 1179 | WP_000173436.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CIC27_RS09575 () | 1985830..1986120 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| CIC27_RS09580 () | 1986188..1986541 | + | 354 | WP_001042123.1 | protein YebF | - |
| CIC27_RS09585 () | 1986635..1987294 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| CIC27_RS09590 () | 1987507..1989558 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| CIC27_RS09595 () | 1989595..1990293 | - | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| CIC27_RS09600 () | 1990317..1990973 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| CIC27_RS09605 () | 1991081..1991311 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| CIC27_RS09610 () | 1991449..1991823 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| CIC27_RS09615 () | 1991824..1992699 | + | 876 | WP_000979695.1 | copper homeostasis membrane protein CopD | - |
| CIC27_RS09620 () | 1992716..1993069 | + | 354 | WP_017441954.1 | YebY family protein | - |
| - | 1993172..1993315 | - | 144 | - | - | Antitoxin Detail |
| - | 1993210..1993313 | + | 104 | - | - | Toxin Detail |
| CIC27_RS09625 () | 1993444..1994523 | - | 1080 | WP_000087641.1 | hypothetical protein ; Integrase | Integrase |
| CIC27_RS09630 () | 1994556..1995704 | - | 1149 | Protein_1897 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| CIC27_RS09635 () | 1995696..1995944 | + | 249 | Protein_1898 | glycoside hydrolase family 19 protein | - |
| CIC27_RS09640 () | 1995941..1996473 | + | 533 | Protein_1899 | DUF2514 domain-containing protein | - |
| CIC27_RS09645 () | 1996730..1996897 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| CIC27_RS09650 () | 1997200..1997691 | + | 492 | WP_000348547.1 | DUF1441 family protein | - |
| CIC27_RS09655 () | 1997678..1998245 | + | 568 | Protein_1902 | phage terminase large subunit family protein | - |
| CIC27_RS09660 () | 1998286..1999224 | + | 939 | Protein_1903 | tail fiber protein | - |
| CIC27_RS24215 () | 1999225..1999572 | + | 348 | Protein_1904 | tail assembly chaperone | - |
| CIC27_RS09665 () | 1999669..1999869 | - | 201 | WP_031615635.1 | PagK family vesicle-borne virulence factor | - |
| CIC27_RS24220 () | 2000259..2000439 | - | 181 | Protein_1906 | IS3 family transposase | - |
| CIC27_RS09670 () | 2000430..2000531 | + | 102 | Protein_1907 | arsenic transporter | - |
| CIC27_RS24225 () | 2001153..2001385 | + | 233 | Protein_1908 | helix-turn-helix domain-containing protein | - |
| CIC27_RS09680 () | 2001712..2002326 | - | 615 | WP_000848064.1 | disulfide bond formation protein B | - |
| CIC27_RS09685 () | 2002336..2002494 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| CIC27_RS09690 () | 2002627..2003541 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| CIC27_RS09695 () | 2004333..2004896 | - | 564 | Protein_1912 | fimbrial protein | - |
| CIC27_RS09700 () | 2004886..2005051 | + | 166 | Protein_1913 | DUF4113 domain-containing protein | - |
| CIC27_RS09705 () | 2005064..2005596 | + | 533 | Protein_1914 | IS256 family transposase ISEc39 | Transposase |
| CIC27_RS09710 () | 2005742..2005882 | - | 141 | WP_001604859.1 | hypothetical protein | - |
| CIC27_RS09715 () | 2006048..2006317 | - | 270 | WP_001611547.1 | hypothetical protein | - |
| CIC27_RS09720 () | 2006357..2006557 | + | 201 | WP_000007801.1 | hypothetical protein | - |
| CIC27_RS09725 () | 2006686..2007105 | + | 420 | WP_000354410.1 | GNAT family N-acetyltransferase | - |
| CIC27_RS09730 () | 2007234..2007710 | - | 477 | WP_023230990.1 | hypothetical protein | - |
| CIC27_RS09735 () | 2008039..2008434 | - | 396 | WP_000422887.1 | DUF1398 domain-containing protein | - |
| CIC27_RS09740 () | 2009118..2009840 | + | 723 | WP_000182069.1 | hypothetical protein | VF |
| CIC27_RS09745 () | 2010125..2010289 | + | 165 | WP_001134850.1 | hypothetical protein | - |
| CIC27_RS09750 () | 2010514..2011164 | + | 651 | WP_000986166.1 | protein-serine/threonine phosphatase | - |
| CIC27_RS09755 () | 2011183..2011374 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| CIC27_RS09760 () | 2011485..2011721 | - | 237 | WP_024131167.1 | YebV family protein | - |
| CIC27_RS09765 () | 2011838..2013277 | - | 1440 | WP_001530936.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CIC27_RS09770 () | 2013355..2015988 | - | 2634 | WP_001530909.1 | hypothetical protein | VF |
| CIC27_RS09775 () | 2015957..2017240 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| CIC27_RS09780 () | 2017369..2017866 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| CIC27_RS09785 () | 2017964..2018650 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| CIC27_RS09790 () | 2018670..2020718 | + | 2049 | WP_001091241.1 | carboxy terminal-processing peptidase | - |
| CIC27_RS09795 () | 2020911..2021792 | + | 882 | WP_097361689.1 | protease HtpX | - |
| CIC27_RS09800 () | 2021840..2023213 | - | 1374 | WP_000416144.1 | MFS transporter | - |
| CIC27_RS09805 () | 2023389..2024180 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| CIC27_RS09810 () | 2024392..2024631 | - | 240 | WP_001236778.1 | invasion protein YobH | - |
| CIC27_RS09815 () | 2024789..2024932 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| CIC27_RS09820 () | 2025003..2025290 | + | 288 | WP_001000660.1 | YebO family protein | - |
| CIC27_RS09825 () | 2025939..2026082 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| CIC27_RS09830 () | 2026095..2026304 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CIC27_RS09835 () | 2026524..2028269 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| CIC27_RS09840 () | 2028335..2029144 | + | 810 | WP_000010916.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CIC27_RS09845 () | 2029141..2029707 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| CIC27_RS09850 () | 2030117..2030575 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|