MGE detailed information
MGE type: Prophage MGE length: 69903 bp
Accession: NZ_CP075110 Location: 1820032..1889934 Organism: Salmonella enterica strain CFSAN060804 Replicon: chromosome
Accession: NZ_CP075110 Location: 1820032..1889934 Organism: Salmonella enterica strain CFSAN060804 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIC27_RS08565 (1815322) | 1815322..1816047 | + | 726 | WP_023972365.1 | precorrin-3B C(17)-methyltransferase | - |
| CIC27_RS08570 (1816044) | 1816044..1816835 | + | 792 | WP_001001975.1 | cobalt-precorrin-6A reductase | - |
| CIC27_RS08575 (1816838) | 1816838..1817632 | + | 795 | WP_023257662.1 | sirohydrochlorin cobaltochelatase | - |
| CIC27_RS08580 (1817629) | 1817629..1818342 | + | 714 | WP_023231076.1 | cobalt-factor II C(20)-methyltransferase | - |
| CIC27_RS08585 (1818339) | 1818339..1819076 | + | 738 | WP_001728371.1 | cobalt ECF transporter S component CbiM | - |
| CIC27_RS08590 (1819078) | 1819078..1819359 | + | 282 | WP_000753212.1 | energy-coupling factor ABC transporter substrate-binding protein | - |
| CIC27_RS08595 (1819346) | 1819346..1820023 | + | 678 | WP_023231075.1 | energy-coupling factor ABC transporter transmembrane protein | - |
| CIC27_RS08600 (1820032) | 1820032..1820847 | + | 816 | WP_000881544.1 | hypothetical protein | VF |
| CIC27_RS08605 (1820844) | 1820844..1822364 | + | 1521 | WP_000189661.1 | cobyric acid synthase | - |
| CIC27_RS08610 (1822361) | 1822361..1822906 | + | 546 | WP_000973189.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| CIC27_RS08615 (1822903) | 1822903..1823646 | + | 744 | WP_000040001.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| CIC27_RS08620 (1823673) | 1823673..1824743 | + | 1071 | WP_001193968.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| CIC27_RS08625 (1824821) | 1824821..1825750 | + | 930 | WP_001252827.1 | L,D-transpeptidase | - |
| CIC27_RS08630 (1826186) | 1826186..1826449 | + | 264 | Protein_1698 | integrase domain-containing protein | - |
| CIC27_RS08635 (1826906) | 1826906..1828288 | + | 1383 | WP_000992185.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CIC27_RS08640 (1828323) | 1828323..1829819 | + | 1497 | WP_000631806.1 | class I adenylate-forming enzyme family protein | - |
| CIC27_RS08645 (1829942) | 1829942..1830892 | + | 951 | WP_023231009.1 | DMT family transporter | - |
| CIC27_RS08650 (1830980) | 1830980..1831975 | + | 996 | WP_023972363.1 | glyceraldehyde-3-phosphate dehydrogenase | - |
| CIC27_RS08655 (1832125) | 1832125..1833003 | - | 879 | WP_023972362.1 | hypothetical protein | VF |
| CIC27_RS08660 (1833704) | 1833704..1834959 | - | 1256 | Protein_1704 | integrase arm-type DNA-binding domain-containing protein | - |
| CIC27_RS08670 (1835356) | 1835356..1836813 | + | 1458 | WP_001542574.1 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| CIC27_RS08680 (1837451) | 1837451..1837916 | + | 466 | Protein_1706 | hypothetical protein | - |
| CIC27_RS08685 (1837910) | 1837910..1838236 | + | 327 | WP_000228161.1 | DUF1493 family protein | - |
| CIC27_RS08690 (1838225) | 1838225..1838386 | - | 162 | WP_001531298.1 | hypothetical protein | - |
| CIC27_RS08695 (1838432) | 1838432..1839886 | + | 1455 | WP_000428191.1 | AMP nucleosidase | - |
| CIC27_RS24175 (1840129) | 1840129..1840227 | - | 99 | Protein_1710 | Arm DNA-binding domain-containing protein | - |
| CIC27_RS24180 (1840633) | 1840633..1840897 | - | 265 | Protein_1711 | Arm DNA-binding domain-containing protein | - |
| CIC27_RS08710 (1841241) | 1841241..1842038 | - | 798 | WP_000598926.1 | DgsA anti-repressor MtfA | - |
| CIC27_RS08720 (1842330) | 1842330..1843319 | - | 990 | WP_000532847.1 | hypothetical protein ; Integrase | Integrase |
| CIC27_RS08725 (1843321) | 1843321..1843548 | - | 228 | WP_001527041.1 | DUF4224 domain-containing protein | - |
| CIC27_RS08730 (1843588) | 1843588..1844157 | - | 570 | WP_001061334.1 | 3'-5' exonuclease | - |
| CIC27_RS08735 (1844161) | 1844161..1844742 | - | 582 | WP_020899398.1 | hypothetical protein | - |
| CIC27_RS08740 (1844753) | 1844753..1845010 | - | 258 | WP_000224241.1 | hypothetical protein | - |
| CIC27_RS08745 (1845012) | 1845012..1845545 | - | 534 | WP_000215886.1 | hypothetical protein | - |
| CIC27_RS08750 (1845616) | 1845616..1846155 | - | 540 | WP_000008351.1 | hypothetical protein | - |
| CIC27_RS08755 (1846292) | 1846292..1847119 | - | 828 | WP_000080416.1 | DUF2303 family protein | - |
| CIC27_RS08760 (1847177) | 1847177..1847547 | - | 371 | Protein_1721 | hypothetical protein | - |
| CIC27_RS24185 (1847771) | 1847771..1847890 | - | 120 | Protein_1722 | hypothetical protein | - |
| CIC27_RS08765 (1848087) | 1848087..1848311 | + | 225 | WP_023891434.1 | hypothetical protein | - |
| CIC27_RS08770 (1848274) | 1848274..1848612 | - | 339 | WP_001067432.1 | ClpX C4-type zinc finger protein | - |
| CIC27_RS08775 (1848817) | 1848817..1849512 | - | 696 | WP_001020636.1 | helix-turn-helix transcriptional regulator | - |
| CIC27_RS08780 (1849610) | 1849610..1849834 | + | 225 | WP_001191666.1 | helix-turn-helix transcriptional regulator | - |
| CIC27_RS08785 (1849863) | 1849863..1850417 | + | 555 | WP_000509731.1 | YmfL family putative regulatory protein | - |
| CIC27_RS24190 (1850563) | 1850563..1850739 | + | 177 | WP_000281065.1 | DUF4222 domain-containing protein | - |
| CIC27_RS24195 (1850758) | 1850758..1851066 | - | 309 | WP_000147078.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| CIC27_RS24200 (1851056) | 1851056..1851385 | - | 330 | WP_024131287.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CIC27_RS24205 (1851299) | 1851299..1852264 | + | 966 | WP_223196747.1 | Rha family phage regulatory protein | - |
| CIC27_RS08795 (1852261) | 1852261..1852485 | + | 225 | WP_000620702.1 | hypothetical protein | - |
| CIC27_RS08800 (1852482) | 1852482..1853456 | + | 975 | WP_000096529.1 | conserved phage C-terminal domain-containing protein | - |
| CIC27_RS08805 (1853453) | 1853453..1853926 | + | 474 | WP_000054227.1 | PerC family transcriptional regulator | - |
| CIC27_RS08810 (1853923) | 1853923..1854804 | + | 882 | WP_085379607.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| CIC27_RS08815 (1854813) | 1854813..1855202 | + | 390 | WP_000779148.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CIC27_RS08820 (1855219) | 1855219..1856079 | + | 861 | WP_001061452.1 | KilA-N domain-containing protein | - |
| CIC27_RS08825 (1856087) | 1856087..1857076 | + | 990 | WP_070804833.1 | DUF968 domain-containing protein | - |
| CIC27_RS08830 (1857090) | 1857090..1857842 | + | 753 | WP_023227964.1 | antitermination protein | - |
| CIC27_RS08835 (1858132) | 1858132..1858374 | + | 243 | WP_001306866.1 | hypothetical protein | - |
| CIC27_RS08840 (1858512) | 1858512..1858847 | + | 336 | WP_162493699.1 | phage holin, lambda family | - |
| CIC27_RS08845 (1858851) | 1858851..1859321 | + | 471 | WP_085379611.1 | glycoside hydrolase family protein | - |
| CIC27_RS08850 (1859311) | 1859311..1859703 | + | 393 | WP_024148265.1 | DUF2570 domain-containing protein | - |
| CIC27_RS24210 (1859588) | 1859588..1859863 | + | 276 | WP_139145412.1 | peptidase | - |
| CIC27_RS08855 (1860234) | 1860234..1860428 | + | 195 | WP_023227967.1 | hypothetical protein | - |
| CIC27_RS08860 (1860481) | 1860481..1860831 | + | 351 | WP_023227968.1 | HNH endonuclease signature motif containing protein | - |
| CIC27_RS08865 (1860955) | 1860955..1861449 | + | 495 | WP_000929191.1 | phage terminase small subunit P27 family | - |
| CIC27_RS08870 (1861446) | 1861446..1863179 | + | 1734 | WP_000088185.1 | terminase large subunit | - |
| CIC27_RS08875 (1863191) | 1863191..1863373 | + | 183 | WP_000605609.1 | protein YmfR | - |
| CIC27_RS08880 (1863373) | 1863373..1864614 | + | 1242 | WP_000466254.1 | phage portal protein | - |
| CIC27_RS08885 (1864592) | 1864592..1865242 | + | 651 | WP_001193639.1 | HK97 family phage prohead protease | - |
| CIC27_RS08890 (1865257) | 1865257..1866462 | + | 1206 | WP_097361788.1 | phage major capsid protein | - |
| CIC27_RS08895 (1866513) | 1866513..1866713 | + | 201 | WP_000601353.1 | hypothetical protein | - |
| CIC27_RS08900 (1866716) | 1866716..1867039 | + | 324 | WP_000927378.1 | head-tail connector protein | - |
| CIC27_RS08905 (1867036) | 1867036..1867440 | + | 405 | WP_000702410.1 | phage head closure protein | - |
| CIC27_RS08910 (1867412) | 1867412..1867924 | + | 513 | WP_001822325.1 | hypothetical protein | - |
| CIC27_RS08915 (1867921) | 1867921..1868481 | + | 561 | WP_000779215.1 | hypothetical protein | - |
| CIC27_RS08920 (1868485) | 1868485..1868649 | + | 165 | WP_000497739.1 | DUF2635 domain-containing protein | - |
| CIC27_RS08925 (1868639) | 1868639..1870135 | + | 1497 | WP_049280220.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| CIC27_RS08930 (1870135) | 1870135..1870491 | + | 357 | WP_000515952.1 | phage tail tube protein | - |
| CIC27_RS08935 (1870521) | 1870521..1870814 | + | 294 | WP_080249853.1 | phage tail protein | - |
| CIC27_RS08940 (1870899) | 1870899..1872827 | + | 1929 | WP_049280221.1 | phage tail tape measure protein | - |
| CIC27_RS08945 (1872861) | 1872861..1874201 | + | 1341 | WP_001624461.1 | DNA circularization N-terminal domain-containing protein | - |
| CIC27_RS08950 (1874198) | 1874198..1875256 | + | 1059 | WP_001066632.1 | baseplate protein | - |
| CIC27_RS08955 (1875256) | 1875256..1875789 | + | 534 | WP_001273649.1 | phage baseplate assembly protein V | - |
| CIC27_RS08960 (1875794) | 1875794..1876207 | + | 414 | WP_000605055.1 | phage GP46 family protein | - |
| CIC27_RS08965 (1876200) | 1876200..1877279 | + | 1080 | WP_000785581.1 | baseplate J/gp47 family protein | - |
| CIC27_RS08970 (1877282) | 1877282..1877869 | + | 588 | WP_001207832.1 | DUF2313 domain-containing protein | - |
| CIC27_RS08975 (1877856) | 1877856..1879418 | + | 1563 | WP_000554735.1 | hypothetical protein | - |
| CIC27_RS08980 (1879388) | 1879388..1879993 | + | 606 | WP_022742744.1 | tail fiber assembly protein | - |
| CIC27_RS08985 (1880107) | 1880107..1880340 | - | 234 | WP_000836773.1 | cold shock protein YdfK | - |
| CIC27_RS08990 (1880415) | 1880415..1880528 | - | 114 | WP_122815478.1 | YnaM/YnfT family protein | - |
| CIC27_RS08995 (1880576) | 1880576..1880989 | - | 414 | WP_000842532.1 | hypothetical protein | - |
| CIC27_RS09000 (1880986) | 1880986..1881198 | - | 213 | WP_001093793.1 | hypothetical protein | - |
| CIC27_RS09005 (1881530) | 1881530..1881673 | + | 144 | Protein_1775 | tail fiber assembly protein | - |
| CIC27_RS09010 (1882393) | 1882393..1882554 | + | 162 | WP_001529333.1 | hypothetical protein | - |
| CIC27_RS09015 (1882681) | 1882681..1883100 | + | 420 | WP_000394197.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CIC27_RS09020 (1883103) | 1883103..1884371 | + | 1269 | WP_000457657.1 | Y-family DNA polymerase | - |
| CIC27_RS09025 (1884826) | 1884826..1885038 | + | 213 | WP_000208509.1 | cold-shock protein | - |
| CIC27_RS09030 (1885049) | 1885049..1885237 | + | 189 | WP_024131109.1 | hypothetical protein | - |
| CIC27_RS09035 (1885498) | 1885498..1886694 | - | 1197 | WP_023231006.1 | hypothetical protein | VF |
| CIC27_RS09040 (1887344) | 1887344..1887643 | + | 300 | WP_000107430.1 | cell division protein DrpB | - |
| CIC27_RS09045 (1887735) | 1887735..1888430 | + | 696 | WP_097361693.1 | phosphohydrolase | - |
| CIC27_RS09050 (1888504) | 1888504..1889934 | + | 1431 | WP_001157312.1 | DNA cytosine methyltransferase | - |
| CIC27_RS09055 (1889915) | 1889915..1890385 | + | 471 | WP_000785978.1 | very short patch repair endonuclease | - |
| CIC27_RS09060 (1890374) | 1890374..1891294 | - | 921 | WP_001212263.1 | drug/metabolite exporter YedA | - |
| CIC27_RS09065 (1891464) | 1891464..1892381 | + | 918 | WP_086011187.1 | DUF808 domain-containing protein | - |
| CIC27_RS09070 (1892458) | 1892458..1892643 | + | 186 | WP_000232161.1 | YodC family protein | - |
| CIC27_RS09075 (1892808) | 1892808..1894520 | + | 1713 | WP_001119828.1 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|